RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 ZFP82Q8N141 532 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 C6orf223Q8N319 242 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 KLHL30-AS1Q8NEE0 82 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 OR10W1Q8NGF6 305 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 OR4S2Q8NH73 311 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 VSTM2AQ8TAG5 236 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 TMEM167AQ8TBQ9 72 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 MAFIPQ8WZ33 124 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 RBMXL1Q96E39 390 aaKnown RBP4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 S100A16Q96FQ6 103 aaKnown RBP4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 PACRGQ96M98 296 aaPredicted RBP4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 BET1LQ9NYM9 111 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 COMMD9Q9P000 198 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 XCL2Q9UBD3 114 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 METTL1Q9UBP6 276 aaKnown RBP4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 PRELID3BQ9Y3B1 194 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 IGHV3-16A0A0C4DH30 117 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 KBTBD11O94819 623 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 CD74P04233 296 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 SAA1P0DJI8 122 aaPredicted RBP4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 PTHLHP12272 177 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 NFYAP23511 347 aaPredicted RBP4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 RPL5P46777 297 aaKnown RBP4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 RND2P52198 227 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 KRTAP10-11P60412 298 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 ZNF616Q08AN1 781 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 PRSS8Q16651 343 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 GUK1Q16774 197 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 VMA21Q3ZAQ7 101 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 TMEM69Q5SWH9 247 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 C9orf66Q5T8R8 295 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 LHFPL1Q86WI0 220 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 OR4A5Q8NH83 315 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 RAB2BQ8WUD1 216 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 C15orf40Q8WUR7 153 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 AP3S1Q92572 193 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 MRAP2Q96G30 205 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 TMEM56Q96MV1 263 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 SLIRPQ9GZT3 109 aaKnown RBP4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 MIXL1Q9H2W2 232 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 JPT2Q9H910 190 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 GNB4Q9HAV0 340 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 PARP11Q9NR21 331 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 LINC00527Q9UJ94 153 aa4.34□□□□□ -1.71
TMEM39A-212ENST00000497993 HUWE1Q7Z6Z7 4374 aaKnown RBP4.34□□□□□ -1.72
TMEM39A-212ENST00000497993 TRAV8-4A0A0B4J246 113 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 KIR2DL5BA0A0G2JN68 375 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 KIR2DL5BA0A0G2JPC4 375 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 A0A1B0GW64 132 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 RPL37AP8A6NKH3 93 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 FAM223BA6NKX1 122 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 K7EIL1 84 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 CRYZL1O95825 349 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 P01737 135 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 ELK1P19419 428 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 RCVRNP35243 200 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 LSM3P62310 102 aaKnown RBP4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 GNB1P62873 340 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 MRPS10P82664 201 aaKnown RBP4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 CATR1Q13166 79 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 FXYD3Q14802 87 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 SPCS2Q15005 226 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 ZNF343Q6P1L6 599 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 UNQ5815/PRO19632Q6UWF5 114 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 C9orf47Q6ZRZ4 202 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 FAM223AQ8IWN6 122 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 KIR2DL5AQ8N109 375 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 TTC9CQ8N5M4 171 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 OR1N2Q8NGR9 330 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 KIR2DL5BQ8NHK3 375 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 SRSF12Q8WXF0 261 aaKnown RBP4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 TMEM190Q8WZ59 177 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 USMG5Q96IX5 58 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 SPIN2AQ99865 258 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 SPIN2BQ9BPZ2 258 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 C20orf144Q9BQM9 153 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 CHCHD5Q9BSY4 110 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 ARV1Q9H2C2 271 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 ZNF430Q9H8G1 570 aaPredicted RBP4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 MTFP1Q9UDX5 166 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 ZNF257Q9Y2Q1 563 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 DNAH7Q8WXX0 4024 aa4.33□□□□□ -1.72
TMEM39A-212ENST00000497993 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 INS-IGF2F8WCM5 200 aa4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 LINC01619G3V211 115 aa4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 OR2A4O95047 310 aa4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 SNAPINO95295 136 aa4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 HRASP01112 189 aa4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 TCRBP04435 133 aa4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 HSPB1P04792 205 aaKnown RBP4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 P0C879 139 aa4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 PRSS3P35030 304 aa4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 ZNF585BQ52M93 769 aa4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 AADACL3Q5VUY0 350 aa4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 ZNF818PQ6ZRF7 136 aa4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 HSD17B13Q7Z5P4 300 aaPredicted RBP4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 ZNF429Q86V71 674 aa4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 SLC25A42Q86VD7 318 aa4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 OR11H1Q8NG94 326 aa4.32□□□□□ -1.72
TMEM39A-212ENST00000497993 DEDD2Q8WXF8 326 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms