RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.88□□□□□ -1.15
SHROOM3-210ENST00000497440 NRARPQ7Z6K4 114 aa7.88□□□□□ -1.15
SHROOM3-210ENST00000497440 OR1B1Q8NGR6 318 aa7.88□□□□□ -1.15
SHROOM3-210ENST00000497440 LYRM2Q9NU23 88 aaPredicted RBP7.88□□□□□ -1.15
SHROOM3-210ENST00000497440 PAIP2BQ9ULR5 123 aaKnown RBP7.88□□□□□ -1.15
SHROOM3-210ENST00000497440 A0A0J9YX75 114 aa7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 NUPR2A6NF83 97 aa7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 ZNF705FA8MVS1 300 aaPredicted RBP7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 AGPAT2O15120 278 aa7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 HYPMO75409 117 aa7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 ZNF705DP0CH99 300 aaPredicted RBP7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 ZNF705BP0CI00 300 aaPredicted RBP7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 S100A7P31151 101 aa7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 ID1P41134 155 aa7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 GALR1P47211 349 aa7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 DEFB1P60022 68 aa7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 AKR1C1Q04828 323 aa7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 TMEM252Q8N6L7 170 aa7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 TMEM37Q8WXS4 190 aa7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 C20orf173Q96LM9 149 aa7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 MGST2Q99735 147 aa7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 RSG1Q9BU20 258 aa7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 TMEM147Q9BVK8 224 aa7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 SCRT1Q9BWW7 348 aa7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 C1QTNF4Q9BXJ3 329 aa7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 WDR83OSQ9Y284 106 aa7.87□□□□□ -1.15
SHROOM3-210ENST00000497440 ELOA3CA0A087WX78 387 aaPredicted RBP7.86□□□□□ -1.15
SHROOM3-210ENST00000497440 PRAF2O60831 178 aa7.86□□□□□ -1.15
SHROOM3-210ENST00000497440 NUTF2P61970 127 aaKnown RBP7.86□□□□□ -1.15
SHROOM3-210ENST00000497440 RRAS2P62070 204 aaPredicted RBP7.86□□□□□ -1.15
SHROOM3-210ENST00000497440 RAB32Q13637 225 aa7.86□□□□□ -1.15
SHROOM3-210ENST00000497440 GSG1LQ6UXU4 331 aa7.86□□□□□ -1.15
SHROOM3-210ENST00000497440 NMES1Q9C002 83 aa7.86□□□□□ -1.15
SHROOM3-210ENST00000497440 HIGD1AQ9Y241 93 aa7.86□□□□□ -1.15
SHROOM3-210ENST00000497440 IGHV4-28A0A0C4DH34 117 aa7.85□□□□□ -1.15
SHROOM3-210ENST00000497440 C5orf51A6NDU8 294 aa7.85□□□□□ -1.15
SHROOM3-210ENST00000497440 FAM24AA6NFZ4 105 aa7.85□□□□□ -1.15
SHROOM3-210ENST00000497440 INMT-MINDY4F8WBC2 141 aa7.85□□□□□ -1.15
SHROOM3-210ENST00000497440 H0YIZ8 118 aa7.85□□□□□ -1.15
SHROOM3-210ENST00000497440 SCGB1D2O95969 90 aa7.85□□□□□ -1.15
SHROOM3-210ENST00000497440 RPL7P18124 248 aaKnown RBP7.85□□□□□ -1.15
SHROOM3-210ENST00000497440 S100A11P31949 105 aa7.85□□□□□ -1.15
SHROOM3-210ENST00000497440 RPL29P47914 159 aaKnown RBP7.85□□□□□ -1.15
SHROOM3-210ENST00000497440 SULT1A1P50225 295 aa7.85□□□□□ -1.15
SHROOM3-210ENST00000497440 SLC38A11Q08AI6 406 aa7.85□□□□□ -1.15
SHROOM3-210ENST00000497440 ZNF546Q86UE3 836 aa7.85□□□□□ -1.15
SHROOM3-210ENST00000497440 C11orf45Q8TAV5 145 aa7.85□□□□□ -1.15
SHROOM3-210ENST00000497440 PHLDA1Q8WV24 401 aaPredicted RBP7.85□□□□□ -1.15
SHROOM3-210ENST00000497440 LINC00476Q8WZB0 136 aa7.85□□□□□ -1.15
SHROOM3-210ENST00000497440 MFFQ9GZY8 342 aa7.85□□□□□ -1.15
SHROOM3-210ENST00000497440 ARV1Q9H2C2 271 aa7.85□□□□□ -1.15
SHROOM3-210ENST00000497440 MGAT4CQ9UBM8 478 aa7.85□□□□□ -1.15
SHROOM3-210ENST00000497440 RNF24Q9Y225 148 aa7.85□□□□□ -1.15
SHROOM3-210ENST00000497440 IGSF23A1L1A6 192 aa7.84□□□□□ -1.15
SHROOM3-210ENST00000497440 SMIM9A6NGZ8 99 aa7.84□□□□□ -1.15
SHROOM3-210ENST00000497440 F6UB75 175 aa7.84□□□□□ -1.15
SHROOM3-210ENST00000497440 CST7O76096 145 aa7.84□□□□□ -1.15
SHROOM3-210ENST00000497440 CXCL3P19876 107 aa7.84□□□□□ -1.15
SHROOM3-210ENST00000497440 H2BFSP57053 126 aa7.84□□□□□ -1.15
SHROOM3-210ENST00000497440 RAP2BP61225 183 aa7.84□□□□□ -1.15
SHROOM3-210ENST00000497440 ATP6V1FQ16864 119 aa7.84□□□□□ -1.15
SHROOM3-210ENST00000497440 C1orf158Q8N1D5 194 aa7.84□□□□□ -1.15
SHROOM3-210ENST00000497440 ENKURQ8TC29 256 aa7.84□□□□□ -1.15
SHROOM3-210ENST00000497440 SAT2Q96F10 170 aaPredicted RBP7.84□□□□□ -1.15
SHROOM3-210ENST00000497440 UHRF2Q96PU4 802 aa7.84□□□□□ -1.15
SHROOM3-210ENST00000497440 ARL6Q9H0F7 186 aa7.84□□□□□ -1.15
SHROOM3-210ENST00000497440 GPN1Q9HCN4 374 aaPredicted RBP7.84□□□□□ -1.15
SHROOM3-210ENST00000497440 RPRMQ9NS64 109 aa7.84□□□□□ -1.15
SHROOM3-210ENST00000497440 LSM5Q9Y4Y9 91 aaKnown RBP7.84□□□□□ -1.15
SHROOM3-210ENST00000497440 HECTD4Q9Y4D8 3996 aa7.84□□□□□ -1.15
SHROOM3-210ENST00000497440 SMCO3A2RU48 225 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 FAM25EA8MYX2 175 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 L7N2F9 121 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 GOSR2O14653 212 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 CRXO43186 299 aaPredicted RBP7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 JTBO76095 146 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 IGLC2P0DOY2 106 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 CXCL2P19875 107 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 PVALBP20472 110 aaPredicted RBP7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 CAMLGP49069 296 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 CAV2P51636 162 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 TCTAP57738 103 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 NANOS2P60321 138 aaKnown RBP7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 VAMP2P63027 116 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 PSG9Q00887 426 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 OPCMLQ14982 345 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 FAM78BQ5VT40 261 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 MORN5Q5VZ52 161 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 LINC00305Q7Z4B0 112 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 S100A7AQ86SG5 101 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 PPP1R14BQ96C90 147 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 C16orf92Q96LL3 132 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 LINC00052Q96N35 136 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 RNF126Q9BV68 326 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 SLC25A22Q9H936 323 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 DNAJC4Q9NNZ3 241 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 UQCC1Q9NVA1 299 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 CLEC5AQ9NY25 188 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 DOK5Q9P104 306 aa7.83□□□□□ -1.16
SHROOM3-210ENST00000497440 XCL2Q9UBD3 114 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms