RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 DNMT1P26358 1616 aaKnown RBP1.98□□□□□ -2.09
VPS36-206ENST00000497149 DICER1Q9UPY3 1922 aaKnown RBP1.97□□□□□ -2.09
VPS36-206ENST00000497149 SHANK3Q9BYB0 1731 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 TRIOBPQ9H2D6 2365 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 TRAV27A0A087WT01 109 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 TRAV41A0A0B4J266 112 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 SMIM31A0A1B0GVY4 71 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 ZNF670-ZNF695F2Z2N8 137 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 C19orf84I3L1E1 186 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 M0R378 163 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 NAPSAO96009 420 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 TNFP01375 233 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 PYYP10082 97 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 BRS3P32247 399 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 ZNF80P51504 273 aaPredicted RBP1.97□□□□□ -2.09
VPS36-206ENST00000497149 S100A10P60903 97 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 FGF12P61328 243 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 HBBP68871 147 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 MYL5Q02045 173 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 Q5XG85 94 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 EIF5AL1Q6IS14 154 aaKnown RBP1.97□□□□□ -2.09
VPS36-206ENST00000497149 PHF5AQ7RTV0 110 aaKnown RBP1.97□□□□□ -2.09
VPS36-206ENST00000497149 ATOH7Q8N100 152 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 KCNRGQ8N5I3 272 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 OR5D16Q8NGK9 328 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 OR8D4Q8NGM9 314 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 OR4K13Q8NH42 304 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 DERL1Q9BUN8 251 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 SNRNP25Q9BV90 132 aaKnown RBP1.97□□□□□ -2.09
VPS36-206ENST00000497149 MRPL32Q9BYC8 188 aaKnown RBP1.97□□□□□ -2.09
VPS36-206ENST00000497149 ZNF286AQ9HBT8 521 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 SAR1AQ9NR31 198 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 SNX12Q9UMY4 172 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 HSPE1-MOB4S4R3N1 261 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 WDR97A6NE52 1622 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 KIAA1107Q9UPP5 1409 aa1.97□□□□□ -2.09
VPS36-206ENST00000497149 CCDC18Q5T9S5 1454 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 TRGV10A0A0A0MS01 117 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 A0A0D9SG52 128 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 A0A0G2JMM0 328 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 TRBV27A0A0K0K1C4 114 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 LOC100130705A0A1B0GUX0 176 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 A0A1W2PPB8 328 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 ZNF727A8MUV8 499 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 KIR3DP1A8MWS1 328 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 UBFD1O14562 309 aaKnown RBP1.96□□□□□ -2.1
VPS36-206ENST00000497149 SOD1P00441 154 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 C1QAP02745 245 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 CD14P08571 375 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 LINC00032P0C843 101 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 INSL3P51460 131 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 FXYD7P58549 80 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 HIST1H4AP62805 103 aaKnown RBP1.96□□□□□ -2.1
VPS36-206ENST00000497149 UBE2BP63146 152 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 QRFPP83859 136 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 PLGLB1Q02325 96 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 RPL18Q07020 188 aaKnown RBP1.96□□□□□ -2.1
VPS36-206ENST00000497149 LINC01545Q5VT33 79 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 AADACL3Q5VUY0 350 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 LCN15Q6UWW0 184 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 IZUMO2Q6UXV1 221 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 RPS19BP1Q86WX3 136 aaKnown RBP1.96□□□□□ -2.1
VPS36-206ENST00000497149 SVBPQ8N300 66 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 RPP25LQ8N5L8 163 aaKnown RBP1.96□□□□□ -2.1
VPS36-206ENST00000497149 FNDC9Q8TBE3 224 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 BRK1Q8WUW1 75 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 MCEEQ96PE7 176 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 CIB3Q96Q77 187 aaPredicted RBP1.96□□□□□ -2.1
VPS36-206ENST00000497149 SDF2Q99470 211 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 NAA60Q9H7X0 242 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 XAGE1AQ9HD64 81 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 RPRMQ9NS64 109 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 TXNL4BQ9NX01 149 aaKnown RBP1.96□□□□□ -2.1
VPS36-206ENST00000497149 IL36BQ9NZH7 164 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 RNF11Q9Y3C5 154 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 MRPS16Q9Y3D3 137 aaKnown RBP1.96□□□□□ -2.1
VPS36-206ENST00000497149 CEP162Q5TB80 1403 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 TRAPPC8Q9Y2L5 1435 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 ANKRD36BQ8N2N9 1353 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 ZFC3H1O60293 1989 aaKnown RBP1.96□□□□□ -2.1
VPS36-206ENST00000497149 PCNX2A6NKB5 2137 aa1.96□□□□□ -2.1
VPS36-206ENST00000497149 MYH6P13533 1939 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 AKAP11Q9UKA4 1901 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 TCOF1Q13428 1488 aaKnown RBP1.95□□□□□ -2.1
VPS36-206ENST00000497149 KDM5CP41229 1560 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 PRG4Q92954 1404 aaPredicted RBP1.95□□□□□ -2.1
VPS36-206ENST00000497149 OR51F1A6NGY5 319 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 ZNF860A6NHJ4 632 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 FNDC10F2Z333 226 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 UQCRQO14949 82 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 HIST1H2BKO60814 126 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 NDUFB2O95178 105 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 PMP2P02689 132 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 HIST1H2BJP06899 126 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 SPINK8P0C7L1 97 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 IFITM1P13164 125 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 HLA-DRB4P13762 266 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 C22orf39Q6P5X5 142 aa1.95□□□□□ -2.1
VPS36-206ENST00000497149 ZNF322Q6U7Q0 402 aaPredicted RBP1.95□□□□□ -2.1
VPS36-206ENST00000497149 TTC9CQ8N5M4 171 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms