RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 FCGR3BO75015 233 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 IGHG4P01861 327 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 MYOD1P15172 320 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 SRP14P37108 136 aaKnown RBP4.97□□□□□ -1.61
SSBP1-213ENST00000496622 RPL31P62899 125 aaKnown RBP4.97□□□□□ -1.61
SSBP1-213ENST00000496622 GNG5P63218 68 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 ZNF841Q6ZN19 808 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 FOXI2Q6ZQN5 318 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 LCNL1Q6ZST4 164 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 ZNF645Q8N7E2 425 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 OR5B3Q8NH48 314 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 ZNF665Q9H7R5 613 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 TLN2Q9Y4G6 2542 aa4.97□□□□□ -1.61
SSBP1-213ENST00000496622 TRAV3A0A0B4J244 114 aa4.96□□□□□ -1.61
SSBP1-213ENST00000496622 NPIPB11E5RHQ5 1161 aa4.96□□□□□ -1.61
SSBP1-213ENST00000496622 M0R1X1 148 aa4.96□□□□□ -1.61
SSBP1-213ENST00000496622 CD55P08174 381 aa4.96□□□□□ -1.61
SSBP1-213ENST00000496622 RPL35AP18077 110 aaKnown RBP4.96□□□□□ -1.61
SSBP1-213ENST00000496622 LINC00310P59036 64 aa4.96□□□□□ -1.61
SSBP1-213ENST00000496622 ZNF415Q09FC8 603 aa4.96□□□□□ -1.61
SSBP1-213ENST00000496622 CT83Q5H943 113 aa4.96□□□□□ -1.61
SSBP1-213ENST00000496622 C6orf226Q5I0X4 101 aa4.96□□□□□ -1.61
SSBP1-213ENST00000496622 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.96□□□□□ -1.61
SSBP1-213ENST00000496622 Q8TCH9 128 aa4.96□□□□□ -1.61
SSBP1-213ENST00000496622 AQP10Q96PS8 301 aa4.96□□□□□ -1.61
SSBP1-213ENST00000496622 SCRT1Q9BWW7 348 aa4.96□□□□□ -1.61
SSBP1-213ENST00000496622 IFI27L2Q9H2X8 130 aa4.96□□□□□ -1.61
SSBP1-213ENST00000496622 PLEKHF2Q9H8W4 249 aa4.96□□□□□ -1.61
SSBP1-213ENST00000496622 TCF19Q9Y242 345 aa4.96□□□□□ -1.61
SSBP1-213ENST00000496622 CYSLTR1Q9Y271 337 aa4.96□□□□□ -1.61
SSBP1-213ENST00000496622 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.96□□□□□ -1.625e-19■■■■■ 32
SSBP1-213ENST00000496622 SAA2-SAA4A0A096LPE2 208 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 LRRC30A6NM36 301 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 IGKV1-16P04430 117 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 SAA2P0DJI9 122 aaPredicted RBP4.96□□□□□ -1.62
SSBP1-213ENST00000496622 CT45A6P0DMU7 189 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 CT45A5P0DMU8 189 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 CT45A10P0DMU9 189 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 CT45A7P0DMV0 189 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 CGB3P0DN86 165 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 CGB7P0DN87 165 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 SLC25A6P12236 298 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 RND3P61587 244 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 C4orf26Q17RF5 130 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 MPV17L2Q567V2 206 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 OR10J3Q5JRS4 329 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 TMEM200BQ69YZ2 307 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 KLHDC1Q8N7A1 406 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 OR4F17Q8NGA8 305 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 OR1L8Q8NGR8 309 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 RPEQ96AT9 228 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 OR4F4Q96R69 305 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 PARP11Q9NR21 331 aa4.96□□□□□ -1.62
SSBP1-213ENST00000496622 ZNF469Q96JG9 3925 aaPredicted RBP4.96□□□□□ -1.62
SSBP1-213ENST00000496622 TRBV24-1A0A075B6N3 115 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 TRGV10A0A0A0MS01 117 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 OR4C46A6NHA9 309 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 K7EP34 96 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 LOXP28300 417 aaPredicted RBP4.95□□□□□ -1.62
SSBP1-213ENST00000496622 EWSR1Q01844 656 aaKnown RBP eCLIP4.95□□□□□ -1.62
SSBP1-213ENST00000496622 ARL16Q0P5N6 197 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 ZNF672Q499Z4 452 aaPredicted RBP4.95□□□□□ -1.62
SSBP1-213ENST00000496622 ACTL10Q5JWF8 245 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 SPANXN5Q5MJ07 72 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 TMEM252Q8N6L7 170 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 ZNF439Q8NDP4 499 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 OR5C1Q8NGR4 320 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 OR2G3Q8NGZ4 309 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 ITLN2Q8WWU7 325 aaPredicted RBP4.95□□□□□ -1.62
SSBP1-213ENST00000496622 TMEM37Q8WXS4 190 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 TMEM126AQ9H061 195 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 NRN1Q9NPD7 142 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 PKIGQ9Y2B9 76 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 IGHV3-72A0A0B4J1Y9 119 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 MUC21A0A0G2JKD1 596 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 MUC21A0A140T8X8 626 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 FAM231BA6NCW3 169 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 MT-ATP8P03928 68 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 LINC00694P0DN24 101 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 DUTP33316 252 aaKnown RBP4.95□□□□□ -1.62
SSBP1-213ENST00000496622 THBS3P49746 956 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 EMP1P54849 157 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 EIF4EBP1Q13541 118 aaPredicted RBP4.95□□□□□ -1.62
SSBP1-213ENST00000496622 FBXL19-AS1Q494R0 122 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 MUC21Q5SSG8 566 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 TEX36Q5VZQ5 186 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 TMEM256Q8N2U0 113 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 OR10G7Q8NGN6 311 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 IL17DQ8TAD2 202 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 TMEM170AQ8WVE7 144 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 TMEM101Q96IK0 257 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 TM2D2Q9BX73 214 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 WDR61Q9GZS3 305 aaKnown RBP4.95□□□□□ -1.62
SSBP1-213ENST00000496622 PARLQ9H300 379 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 WASHC3Q9Y3C0 194 aa4.95□□□□□ -1.62
SSBP1-213ENST00000496622 RAI1Q7Z5J4 1906 aaPredicted RBP4.94□□□□□ -1.62
SSBP1-213ENST00000496622 CD5LO43866 347 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 NUPR1O60356 82 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 PITX3O75364 302 aa4.94□□□□□ -1.62
SSBP1-213ENST00000496622 DEFA4P12838 97 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms