RNA–Protein interactions for RNA: ENST00000496574.6

PKD1-222, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,419 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-222ENST00000496574 NOTCH3Q9UM47 2321 aa11.54□□□□□ -0.56
PKD1-222ENST00000496574 IGHV1-24A0A0C4DH33 117 aa11.54□□□□□ -0.56
PKD1-222ENST00000496574 K7EN84 100 aa11.54□□□□□ -0.56
PKD1-222ENST00000496574 SCGB1A1P11684 91 aa11.54□□□□□ -0.56
PKD1-222ENST00000496574 EBLN2Q6P2I7 272 aa11.54□□□□□ -0.56
PKD1-222ENST00000496574 GAGE2BQ13066 116 aa11.54□□□□□ -0.56
PKD1-222ENST00000496574 GAGE2EQ4V326 116 aa11.54□□□□□ -0.56
PKD1-222ENST00000496574 GAGE2DQ9UEU5 116 aa11.54□□□□□ -0.56
PKD1-222ENST00000496574 PF4V1P10720 104 aa11.54□□□□□ -0.56
PKD1-222ENST00000496574 LMO1P25800 156 aa11.54□□□□□ -0.56
PKD1-222ENST00000496574 Q8NFD4 153 aa11.54□□□□□ -0.56
PKD1-222ENST00000496574 EEF1AKMT3Q96AZ1 226 aa11.54□□□□□ -0.56
PKD1-222ENST00000496574 TMEM133Q9H2Q1 129 aa11.54□□□□□ -0.56
PKD1-222ENST00000496574 GEMIN7Q9H840 131 aaKnown RBP11.54□□□□□ -0.56
PKD1-222ENST00000496574 TMEM14BQ9NUH8 114 aa11.54□□□□□ -0.56
PKD1-222ENST00000496574 IGKV1-16P04430 117 aa11.53□□□□□ -0.56
PKD1-222ENST00000496574 Q86TA4 180 aa11.53□□□□□ -0.56
PKD1-222ENST00000496574 SPRR3Q9UBC9 169 aa11.53□□□□□ -0.56
PKD1-222ENST00000496574 ACACAQ13085 2346 aa11.53□□□□□ -0.56
PKD1-222ENST00000496574 IGKV1D-17A0A075B6S4 117 aa11.53□□□□□ -0.56
PKD1-222ENST00000496574 ARPC1AQ92747 370 aa11.53□□□□□ -0.56
PKD1-222ENST00000496574 ZNF492Q9P255 531 aa11.53□□□□□ -0.56
PKD1-222ENST00000496574 IGKV3-15P01624 115 aa11.53□□□□□ -0.56
PKD1-222ENST00000496574 ZFAND6Q6FIF0 208 aa11.53□□□□□ -0.56
PKD1-222ENST00000496574 CD24P25063 80 aa11.53□□□□□ -0.56
PKD1-222ENST00000496574 DLX4Q92988 240 aaPredicted RBP11.53□□□□□ -0.56
PKD1-222ENST00000496574 K7EP34 96 aa11.52□□□□□ -0.56
PKD1-222ENST00000496574 ATP5G2Q06055 141 aa11.52□□□□□ -0.56
PKD1-222ENST00000496574 LAGE3Q14657 143 aa11.52□□□□□ -0.57
PKD1-222ENST00000496574 PRDM6Q9NQX0 595 aa11.52□□□□□ -0.57
PKD1-222ENST00000496574 FOXC1Q12948 553 aa11.52□□□□□ -0.57
PKD1-222ENST00000496574 VWC2Q2TAL6 325 aa11.52□□□□□ -0.57
PKD1-222ENST00000496574 ZCCHC24Q8N2G6 241 aaKnown RBP11.52□□□□□ -0.57
PKD1-222ENST00000496574 SLC50A1Q9BRV3 221 aa11.52□□□□□ -0.57
PKD1-222ENST00000496574 TTC28Q96AY4 2481 aa11.51□□□□□ -0.57
PKD1-222ENST00000496574 IGKV2-40A0A087WW87 121 aaPredicted RBP11.51□□□□□ -0.57
PKD1-222ENST00000496574 NBR2O15453 112 aa11.51□□□□□ -0.57
PKD1-222ENST00000496574 IGKV2D-40P01614 121 aaPredicted RBP11.51□□□□□ -0.57
PKD1-222ENST00000496574 PLXNB3Q9ULL4 1909 aa11.51□□□□□ -0.57
PKD1-222ENST00000496574 KLRB1Q12918 225 aa11.51□□□□□ -0.57
PKD1-222ENST00000496574 ETDBQ3ZM63 59 aa11.51□□□□□ -0.57
PKD1-222ENST00000496574 CD300EQ496F6 205 aaPredicted RBP11.51□□□□□ -0.57
PKD1-222ENST00000496574 DEFB125Q8N687 156 aa11.51□□□□□ -0.57
PKD1-222ENST00000496574 H0YJW9 148 aa11.51□□□□□ -0.57
PKD1-222ENST00000496574 IGHV1-46P01743 117 aa11.51□□□□□ -0.57
PKD1-222ENST00000496574 SPINK8P0C7L1 97 aa11.51□□□□□ -0.57
PKD1-222ENST00000496574 PRB3Q04118 309 aaPredicted RBP11.51□□□□□ -0.57
PKD1-222ENST00000496574 COPS9Q8WXC6 57 aa11.51□□□□□ -0.57
PKD1-222ENST00000496574 UBTD1Q9HAC8 227 aa11.51□□□□□ -0.57
PKD1-222ENST00000496574 TSSC4Q9Y5U2 329 aaPredicted RBP11.51□□□□□ -0.57
PKD1-222ENST00000496574 DENND4CQ5VZ89 1909 aa11.51□□□□□ -0.57
PKD1-222ENST00000496574 ALPK3Q96L96 1907 aa11.51□□□□□ -0.57
PKD1-222ENST00000496574 B9A039 149 aa11.51□□□□□ -0.57
PKD1-222ENST00000496574 SMKR1H3BMG3 65 aa11.51□□□□□ -0.57
PKD1-222ENST00000496574 Q0VFX4 171 aa11.51□□□□□ -0.57
PKD1-222ENST00000496574 TMEM158Q8WZ71 300 aa11.5□□□□□ -0.57
PKD1-222ENST00000496574 NOTCH4Q99466 2003 aa11.5□□□□□ -0.57
PKD1-222ENST00000496574 EP400Q96L91 3159 aa11.5□□□□□ -0.57
PKD1-222ENST00000496574 PLNP26678 52 aa11.5□□□□□ -0.57
PKD1-222ENST00000496574 C9orf172C9J069 976 aa11.5□□□□□ -0.57
PKD1-222ENST00000496574 NTN3O00634 580 aaPredicted RBP11.5□□□□□ -0.57
PKD1-222ENST00000496574 SH2D1AO60880 128 aa11.5□□□□□ -0.57
PKD1-222ENST00000496574 MEIG1Q5JSS6 88 aa11.5□□□□□ -0.57
PKD1-222ENST00000496574 MRAP2Q96G30 205 aa11.5□□□□□ -0.57
PKD1-222ENST00000496574 GOLGB1Q14789 3259 aaKnown RBP11.49□□□□□ -0.57
PKD1-222ENST00000496574 CFHR2P36980 270 aa11.49□□□□□ -0.57
PKD1-222ENST00000496574 LYPD1Q8N2G4 141 aa11.49□□□□□ -0.57
PKD1-222ENST00000496574 PGPEP1Q9NXJ5 209 aa11.49□□□□□ -0.57
PKD1-222ENST00000496574 ATRXP46100 2492 aa11.49□□□□□ -0.57
PKD1-222ENST00000496574 SP9P0CG40 484 aa11.49□□□□□ -0.57
PKD1-222ENST00000496574 PRR20EP86478 221 aa11.49□□□□□ -0.57
PKD1-222ENST00000496574 PRR20CP86479 221 aa11.49□□□□□ -0.57
PKD1-222ENST00000496574 PRR20DP86480 221 aa11.49□□□□□ -0.57
PKD1-222ENST00000496574 PRR20BP86481 221 aa11.49□□□□□ -0.57
PKD1-222ENST00000496574 PRR20AP86496 221 aa11.49□□□□□ -0.57
PKD1-222ENST00000496574 RNFT1Q5M7Z0 435 aa11.49□□□□□ -0.57
PKD1-222ENST00000496574 C19orf54Q5BKX5 351 aa11.49□□□□□ -0.57
PKD1-222ENST00000496574 PCNX1Q96RV3 2341 aa11.49□□□□□ -0.57
PKD1-222ENST00000496574 WDR86Q86TI4 376 aa11.48□□□□□ -0.57
PKD1-222ENST00000496574 MED13LQ71F56 2210 aa11.48□□□□□ -0.57
PKD1-222ENST00000496574 A0A1W2PPM0 123 aa11.48□□□□□ -0.57
PKD1-222ENST00000496574 CEACAM4O75871 244 aa11.48□□□□□ -0.57
PKD1-222ENST00000496574 DNAL4O96015 105 aa11.48□□□□□ -0.57
PKD1-222ENST00000496574 IGHV4-39P01824 125 aa11.48□□□□□ -0.57
PKD1-222ENST00000496574 BSPH1Q075Z2 132 aa11.48□□□□□ -0.57
PKD1-222ENST00000496574 APOBEC3AP31941 199 aaPredicted RBP11.48□□□□□ -0.57
PKD1-222ENST00000496574 Q8TAT8 98 aa11.48□□□□□ -0.57
PKD1-222ENST00000496574 PROK2Q9HC23 129 aa11.48□□□□□ -0.57
PKD1-222ENST00000496574 PRTN3P24158 256 aa11.47□□□□□ -0.57
PKD1-222ENST00000496574 LGALS9BQ3B8N2 356 aa11.47□□□□□ -0.57
PKD1-222ENST00000496574 LGALS9CQ6DKI2 356 aa11.47□□□□□ -0.57
PKD1-222ENST00000496574 CLEC19AQ6UXS0 136 aa11.47□□□□□ -0.57
PKD1-222ENST00000496574 FAM168AQ92567 244 aa11.47□□□□□ -0.57
PKD1-222ENST00000496574 TNFRSF14Q92956 283 aa11.47□□□□□ -0.57
PKD1-222ENST00000496574 ERG28Q9UKR5 140 aa11.47□□□□□ -0.57
PKD1-222ENST00000496574 TRAV2A0A0B4J234 112 aa11.47□□□□□ -0.57
PKD1-222ENST00000496574 TMEM238C9JI98 176 aa11.47□□□□□ -0.57
PKD1-222ENST00000496574 ASPHD1Q5U4P2 390 aa11.47□□□□□ -0.57
PKD1-222ENST00000496574 Q6ZSR3 168 aa11.47□□□□□ -0.57
PKD1-222ENST00000496574 NCOA6Q14686 2063 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms