RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 RHOBP62745 196 aa16.41■□□□□ 0.22
C9orf3-222ENST00000496567 FAM90A2PQ658T7 463 aa16.41■□□□□ 0.22
C9orf3-222ENST00000496567 LEMD1Q68G75 181 aa16.41■□□□□ 0.22
C9orf3-222ENST00000496567 SIGLEC15Q6ZMC9 328 aa16.41■□□□□ 0.22
C9orf3-222ENST00000496567 ZNF680Q8NEM1 530 aa16.41■□□□□ 0.22
C9orf3-222ENST00000496567 OR10G4Q8NGN3 311 aa16.41■□□□□ 0.22
C9orf3-222ENST00000496567 OR10G9Q8NGN4 311 aa16.41■□□□□ 0.22
C9orf3-222ENST00000496567 OR10G7Q8NGN6 311 aa16.41■□□□□ 0.22
C9orf3-222ENST00000496567 SELENOKQ9Y6D0 94 aa16.41■□□□□ 0.22
C9orf3-222ENST00000496567 RPL7P18124 248 aaKnown RBP16.4■□□□□ 0.22
C9orf3-222ENST00000496567 RAB2AP61019 212 aa16.4■□□□□ 0.22
C9orf3-222ENST00000496567 RPL11P62913 178 aaKnown RBP16.4■□□□□ 0.22
C9orf3-222ENST00000496567 TMEM41BQ5BJD5 291 aa16.4■□□□□ 0.22
C9orf3-222ENST00000496567 AKR1C8PQ5T2L2 129 aa16.4■□□□□ 0.22
C9orf3-222ENST00000496567 SAMD5Q5TGI4 173 aa16.4■□□□□ 0.22
C9orf3-222ENST00000496567 ALKAL2Q6UX46 152 aa16.4■□□□□ 0.22
C9orf3-222ENST00000496567 TMEM61Q8N0U2 210 aa16.4■□□□□ 0.22
C9orf3-222ENST00000496567 SEPSECSQ9HD40 501 aaKnown RBP16.4■□□□□ 0.22
C9orf3-222ENST00000496567 FUT9Q9Y231 359 aa16.4■□□□□ 0.22
C9orf3-222ENST00000496567 A0A1W2PPV4 95 aa16.39■□□□□ 0.21
C9orf3-222ENST00000496567 TSPAN4O14817 238 aa16.39■□□□□ 0.21
C9orf3-222ENST00000496567 RGS13O14921 159 aa16.39■□□□□ 0.21
C9orf3-222ENST00000496567 GALR1P47211 349 aa16.39■□□□□ 0.21
C9orf3-222ENST00000496567 G3V4G9 280 aa16.38■□□□□ 0.21
C9orf3-222ENST00000496567 PAFAH1B2P68402 229 aa16.38■□□□□ 0.21
C9orf3-222ENST00000496567 MORN5Q5VZ52 161 aa16.38■□□□□ 0.21
C9orf3-222ENST00000496567 BPIFA4PQ86YQ2 179 aa16.38■□□□□ 0.21
C9orf3-222ENST00000496567 UMAD1C9J7I0 102 aa16.38■□□□□ 0.21
C9orf3-222ENST00000496567 IFNA7P01567 189 aa16.38■□□□□ 0.21
C9orf3-222ENST00000496567 SPAG8Q99932 426 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-222ENST00000496567 TRAV5A0A0B4J249 113 aa16.37■□□□□ 0.21
C9orf3-222ENST00000496567 IZUMO1RA6ND01 250 aa16.37■□□□□ 0.21
C9orf3-222ENST00000496567 TAS2R45P59539 299 aa16.37■□□□□ 0.21
C9orf3-222ENST00000496567 SPATA31B1PQ5VZV4 182 aa16.37■□□□□ 0.21
C9orf3-222ENST00000496567 FAM122CQ6P4D5 195 aa16.37■□□□□ 0.21
C9orf3-222ENST00000496567 ZNF767PQ75MW2 155 aa16.37■□□□□ 0.21
C9orf3-222ENST00000496567 MIR17HGQ75NE6 70 aa16.37■□□□□ 0.21
C9orf3-222ENST00000496567 TMED6Q8WW62 240 aa16.37■□□□□ 0.21
C9orf3-222ENST00000496567 RPRMQ9NS64 109 aa16.37■□□□□ 0.21
C9orf3-222ENST00000496567 IGKV3-7A0A075B6H7 116 aa16.36■□□□□ 0.21
C9orf3-222ENST00000496567 CDC34P49427 236 aaPredicted RBP16.36■□□□□ 0.21
C9orf3-222ENST00000496567 EGFEM1PQ0D2K5 195 aa16.36■□□□□ 0.21
C9orf3-222ENST00000496567 GUCA2BQ16661 112 aa16.36■□□□□ 0.21
C9orf3-222ENST00000496567 RPP25LQ8N5L8 163 aaKnown RBP16.36■□□□□ 0.21
C9orf3-222ENST00000496567 PHYHIPLQ96FC7 376 aa16.36■□□□□ 0.21
C9orf3-222ENST00000496567 ACTR3CQ9C0K3 210 aaPredicted RBP16.36■□□□□ 0.21
C9orf3-222ENST00000496567 UBQLN2Q9UHD9 624 aa16.36■□□□□ 0.21
C9orf3-222ENST00000496567 DNASE2O00115 360 aaPredicted RBP16.35■□□□□ 0.21
C9orf3-222ENST00000496567 STXBP6Q8NFX7 210 aa16.35■□□□□ 0.21
C9orf3-222ENST00000496567 MS4A6AQ9H2W1 248 aa16.35■□□□□ 0.21
C9orf3-222ENST00000496567 TRAV2A0A0B4J234 112 aa16.34■□□□□ 0.21
C9orf3-222ENST00000496567 ZNF785A8K8V0 405 aa16.34■□□□□ 0.21
C9orf3-222ENST00000496567 ATF4P18848 351 aaPredicted RBP16.34■□□□□ 0.21
C9orf3-222ENST00000496567 KHDC3LQ587J8 217 aa16.34■□□□□ 0.21
C9orf3-222ENST00000496567 FAM74A1Q5RGS3 127 aa16.34■□□□□ 0.21
C9orf3-222ENST00000496567 SLC25A2Q9BXI2 301 aa16.34■□□□□ 0.21
C9orf3-222ENST00000496567 NRN1Q9NPD7 142 aa16.34■□□□□ 0.21
C9orf3-222ENST00000496567 TMEM14CQ9P0S9 112 aa16.34■□□□□ 0.21
C9orf3-222ENST00000496567 OR4C46A6NHA9 309 aa16.34■□□□□ 0.21
C9orf3-222ENST00000496567 MEOX2P50222 304 aa16.34■□□□□ 0.21
C9orf3-222ENST00000496567 GBGT1Q8N5D6 347 aa16.34■□□□□ 0.21
C9orf3-222ENST00000496567 FAM167A-AS1Q96KT0 104 aa16.34■□□□□ 0.21
C9orf3-222ENST00000496567 ZNF256Q9Y2P7 627 aaPredicted RBP16.34■□□□□ 0.21
C9orf3-222ENST00000496567 SMAD5-AS1Q9Y6J3 95 aa16.34■□□□□ 0.21
C9orf3-222ENST00000496567 MGAM2Q2M2H8 2515 aa16.33■□□□□ 0.2
C9orf3-222ENST00000496567 MRPS12O15235 138 aaKnown RBP16.33■□□□□ 0.2
C9orf3-222ENST00000496567 GP9P14770 177 aa16.33■□□□□ 0.2
C9orf3-222ENST00000496567 RAB24Q969Q5 203 aa16.33■□□□□ 0.2
C9orf3-222ENST00000496567 PLA2G2EQ9NZK7 142 aa16.33■□□□□ 0.2
C9orf3-222ENST00000496567 OR7C2O60412 319 aa16.32■□□□□ 0.2
C9orf3-222ENST00000496567 TFPI2P48307 235 aa16.32■□□□□ 0.2
C9orf3-222ENST00000496567 RAB5CP51148 216 aa16.32■□□□□ 0.2
C9orf3-222ENST00000496567 SAMD13Q5VXD3 122 aa16.32■□□□□ 0.2
C9orf3-222ENST00000496567 DPPA3Q6W0C5 159 aa16.32■□□□□ 0.2
C9orf3-222ENST00000496567 OR51M1Q9H341 326 aa16.32■□□□□ 0.2
C9orf3-222ENST00000496567 A0A087X0K7 114 aa16.31■□□□□ 0.2
C9orf3-222ENST00000496567 CTXND1A0A1B0GTU2 59 aa16.31■□□□□ 0.2
C9orf3-222ENST00000496567 PQLC2Q6ZP29 291 aa16.31■□□□□ 0.2
C9orf3-222ENST00000496567 WFDC3Q8IUB2 231 aa16.31■□□□□ 0.2
C9orf3-222ENST00000496567 PCNPQ8WW12 178 aaKnown RBP16.31■□□□□ 0.2
C9orf3-222ENST00000496567 PAXXQ9BUH6 204 aa16.31■□□□□ 0.2
C9orf3-222ENST00000496567 STAG3L2P0CL84 134 aa16.3■□□□□ 0.2
C9orf3-222ENST00000496567 STAG3L3P0CL85 134 aa16.3■□□□□ 0.2
C9orf3-222ENST00000496567 GUK1Q16774 197 aa16.3■□□□□ 0.2
C9orf3-222ENST00000496567 BEAN1Q3B7T3 259 aa16.3■□□□□ 0.2
C9orf3-222ENST00000496567 KPRPQ5T749 579 aaPredicted RBP16.3■□□□□ 0.2
C9orf3-222ENST00000496567 DCANP1Q8TF63 244 aa16.3■□□□□ 0.2
C9orf3-222ENST00000496567 HRH4Q9H3N8 390 aa16.3■□□□□ 0.2
C9orf3-222ENST00000496567 K7EQG2 157 aa16.3■□□□□ 0.2
C9orf3-222ENST00000496567 IGLC2P0DOY2 106 aa16.3■□□□□ 0.2
C9orf3-222ENST00000496567 HIST1H1EP10412 219 aaKnown RBP16.3■□□□□ 0.2
C9orf3-222ENST00000496567 SULT1A2P50226 295 aa16.3■□□□□ 0.2
C9orf3-222ENST00000496567 KRTAP10-11P60412 298 aa16.3■□□□□ 0.2
C9orf3-222ENST00000496567 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.3■□□□□ 0.2
C9orf3-222ENST00000496567 HMGB3O15347 200 aaKnown RBP16.29■□□□□ 0.2
C9orf3-222ENST00000496567 PYYP10082 97 aa16.29■□□□□ 0.2
C9orf3-222ENST00000496567 LCN15Q6UWW0 184 aa16.29■□□□□ 0.2
C9orf3-222ENST00000496567 GTSCR1Q86UQ5 136 aa16.29■□□□□ 0.2
C9orf3-222ENST00000496567 FAM213BQ8TBF2 198 aa16.29■□□□□ 0.2
C9orf3-222ENST00000496567 RNF141Q8WVD5 230 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 223.8 ms