RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 PAFAH1B2P68402 229 aa10.56□□□□□ -0.72
CXCL12-208ENST00000496375 HBG1P69891 147 aa10.56□□□□□ -0.72
CXCL12-208ENST00000496375 HBG2P69892 147 aa10.56□□□□□ -0.72
CXCL12-208ENST00000496375 ATP6V1FQ16864 119 aa10.56□□□□□ -0.72
CXCL12-208ENST00000496375 LRRC37A5PQ49AS3 106 aa10.56□□□□□ -0.72
CXCL12-208ENST00000496375 TMEM182Q6ZP80 229 aaPredicted RBP10.56□□□□□ -0.72
CXCL12-208ENST00000496375 CYP2G1PQ6ZSU1 146 aa10.56□□□□□ -0.72
CXCL12-208ENST00000496375 ZNF680Q8NEM1 530 aa10.56□□□□□ -0.72
CXCL12-208ENST00000496375 BPIFCQ8NFQ6 507 aa10.56□□□□□ -0.72
CXCL12-208ENST00000496375 PHLDA1Q8WV24 401 aaPredicted RBP10.56□□□□□ -0.72
CXCL12-208ENST00000496375 GRAMD2BQ96HH9 432 aa10.56□□□□□ -0.72
CXCL12-208ENST00000496375 NARS2Q96I59 477 aaKnown RBP10.56□□□□□ -0.72
CXCL12-208ENST00000496375 TMEM147Q9BVK8 224 aa10.56□□□□□ -0.72
CXCL12-208ENST00000496375 SLC25A31Q9H0C2 315 aa10.56□□□□□ -0.72
CXCL12-208ENST00000496375 WDR83OSQ9Y284 106 aa10.56□□□□□ -0.72
CXCL12-208ENST00000496375 SMCO3A2RU48 225 aa10.55□□□□□ -0.72
CXCL12-208ENST00000496375 OPCMLQ14982 345 aa10.55□□□□□ -0.72
CXCL12-208ENST00000496375 C1orf194Q5T5A4 169 aa10.55□□□□□ -0.72
CXCL12-208ENST00000496375 TCF24Q7RTU0 167 aa10.55□□□□□ -0.72
CXCL12-208ENST00000496375 RARRES2Q99969 163 aa10.55□□□□□ -0.72
CXCL12-208ENST00000496375 UQCC1Q9NVA1 299 aa10.55□□□□□ -0.72
CXCL12-208ENST00000496375 PFDN2Q9UHV9 154 aa10.55□□□□□ -0.72
CXCL12-208ENST00000496375 DFFBO76075 338 aa10.54□□□□□ -0.72
CXCL12-208ENST00000496375 LYZP61626 148 aa10.54□□□□□ -0.72
CXCL12-208ENST00000496375 OR2F1Q13607 317 aa10.54□□□□□ -0.72
CXCL12-208ENST00000496375 PXDC1Q5TGL8 231 aa10.54□□□□□ -0.72
CXCL12-208ENST00000496375 ZNF546Q86UE3 836 aa10.54□□□□□ -0.72
CXCL12-208ENST00000496375 GATAD1Q8WUU5 269 aa10.54□□□□□ -0.72
CXCL12-208ENST00000496375 MGST2Q99735 147 aa10.54□□□□□ -0.72
CXCL12-208ENST00000496375 IGHV3-66A0A0C4DH42 116 aa10.53□□□□□ -0.72
CXCL12-208ENST00000496375 A0A0D9SG52 128 aa10.53□□□□□ -0.72
CXCL12-208ENST00000496375 HELTA6NFD8 242 aa10.53□□□□□ -0.72
CXCL12-208ENST00000496375 AGPAT2O15120 278 aa10.53□□□□□ -0.72
CXCL12-208ENST00000496375 MPDU1O75352 247 aa10.53□□□□□ -0.72
CXCL12-208ENST00000496375 RAB14P61106 215 aa10.53□□□□□ -0.72
CXCL12-208ENST00000496375 NHLH2Q02577 135 aa10.53□□□□□ -0.72
CXCL12-208ENST00000496375 OR11H2Q8NH07 326 aa10.53□□□□□ -0.72
CXCL12-208ENST00000496375 PBDC1Q9BVG4 233 aa10.53□□□□□ -0.72
CXCL12-208ENST00000496375 MS4A6AQ9H2W1 248 aa10.53□□□□□ -0.72
CXCL12-208ENST00000496375 MBD2Q9UBB5 411 aa10.53□□□□□ -0.72
CXCL12-208ENST00000496375 FXYD6-FXYD2A0A087WZ82 144 aa10.52□□□□□ -0.73
CXCL12-208ENST00000496375 DNASE2O00115 360 aaPredicted RBP10.52□□□□□ -0.73
CXCL12-208ENST00000496375 CA1P00915 261 aaPredicted RBP10.52□□□□□ -0.73
CXCL12-208ENST00000496375 LINC00869P0C866 280 aa10.52□□□□□ -0.73
CXCL12-208ENST00000496375 CXCL2P19875 107 aa10.52□□□□□ -0.73
CXCL12-208ENST00000496375 GATA2P23769 480 aaPredicted RBP10.52□□□□□ -0.73
CXCL12-208ENST00000496375 AP2S1P53680 142 aaPredicted RBP10.52□□□□□ -0.73
CXCL12-208ENST00000496375 DEFB131AP59861 70 aa10.52□□□□□ -0.73
CXCL12-208ENST00000496375 RPL11P62913 178 aaKnown RBP10.52□□□□□ -0.73
CXCL12-208ENST00000496375 PRR20EP86478 221 aa10.52□□□□□ -0.73
CXCL12-208ENST00000496375 PRR20CP86479 221 aa10.52□□□□□ -0.73
CXCL12-208ENST00000496375 PRR20DP86480 221 aa10.52□□□□□ -0.73
CXCL12-208ENST00000496375 PRR20BP86481 221 aa10.52□□□□□ -0.73
CXCL12-208ENST00000496375 PRR20AP86496 221 aa10.52□□□□□ -0.73
CXCL12-208ENST00000496375 LEMD1Q68G75 181 aa10.52□□□□□ -0.73
CXCL12-208ENST00000496375 TMUB2Q71RG4 321 aa10.52□□□□□ -0.73
CXCL12-208ENST00000496375 OR5C1Q8NGR4 320 aa10.52□□□□□ -0.73
CXCL12-208ENST00000496375 DCANP1Q8TF63 244 aa10.52□□□□□ -0.73
CXCL12-208ENST00000496375 SEPSECSQ9HD40 501 aaKnown RBP10.52□□□□□ -0.73
CXCL12-208ENST00000496375 FBXL17Q9UF56 701 aa10.52□□□□□ -0.73
CXCL12-208ENST00000496375 LINC00862A6NCI5 91 aa10.51□□□□□ -0.73
CXCL12-208ENST00000496375 H3BRN7 92 aa10.51□□□□□ -0.73
CXCL12-208ENST00000496375 K7EQG2 157 aa10.51□□□□□ -0.73
CXCL12-208ENST00000496375 ARPC5O15511 151 aa10.51□□□□□ -0.73
CXCL12-208ENST00000496375 RPL12P30050 165 aaKnown RBP10.51□□□□□ -0.73
CXCL12-208ENST00000496375 S100A7P31151 101 aa10.51□□□□□ -0.73
CXCL12-208ENST00000496375 NANOS2P60321 138 aaKnown RBP10.51□□□□□ -0.73
CXCL12-208ENST00000496375 CLLU1Q5K131 121 aa10.51□□□□□ -0.73
CXCL12-208ENST00000496375 SIGLEC15Q6ZMC9 328 aa10.51□□□□□ -0.73
CXCL12-208ENST00000496375 RPP25LQ8N5L8 163 aaKnown RBP10.51□□□□□ -0.73
CXCL12-208ENST00000496375 FAM24BQ8N5W8 94 aa10.51□□□□□ -0.73
CXCL12-208ENST00000496375 C11orf45Q8TAV5 145 aa10.51□□□□□ -0.73
CXCL12-208ENST00000496375 MFFQ9GZY8 342 aa10.51□□□□□ -0.73
CXCL12-208ENST00000496375 C11orf68Q9H3H3 251 aaKnown RBP10.51□□□□□ -0.73
CXCL12-208ENST00000496375 HECTD4Q9Y4D8 3996 aa10.51□□□□□ -0.73
CXCL12-208ENST00000496375 UBE2L5PA0A1B0GUS4 154 aa10.5□□□□□ -0.73
CXCL12-208ENST00000496375 ZNF98A6NK75 572 aa10.5□□□□□ -0.73
CXCL12-208ENST00000496375 RPL29P47914 159 aaKnown RBP10.5□□□□□ -0.73
CXCL12-208ENST00000496375 CAMLGP49069 296 aa10.5□□□□□ -0.73
CXCL12-208ENST00000496375 RAB31Q13636 194 aa10.5□□□□□ -0.73
CXCL12-208ENST00000496375 SLC51BQ86UW2 128 aa10.5□□□□□ -0.73
CXCL12-208ENST00000496375 THAP6Q8TBB0 222 aa10.5□□□□□ -0.73
CXCL12-208ENST00000496375 GPR82Q96P67 336 aa10.5□□□□□ -0.73
CXCL12-208ENST00000496375 SHANK2-AS3Q9BTD1 123 aa10.5□□□□□ -0.73
CXCL12-208ENST00000496375 HERC2O95714 4834 aa10.5□□□□□ -0.73
CXCL12-208ENST00000496375 DEFB4AO15263 64 aa10.49□□□□□ -0.73
CXCL12-208ENST00000496375 HYPMO75409 117 aa10.49□□□□□ -0.73
CXCL12-208ENST00000496375 ORM2P19652 201 aa10.49□□□□□ -0.73
CXCL12-208ENST00000496375 ZNF345Q14585 488 aa10.49□□□□□ -0.73
CXCL12-208ENST00000496375 LGALS9CQ6DKI2 356 aa10.49□□□□□ -0.73
CXCL12-208ENST00000496375 PATE2Q6UY27 113 aa10.49□□□□□ -0.73
CXCL12-208ENST00000496375 S100A7AQ86SG5 101 aa10.49□□□□□ -0.73
CXCL12-208ENST00000496375 STHQ8IWL8 128 aa10.49□□□□□ -0.73
CXCL12-208ENST00000496375 OR1B1Q8NGR6 318 aa10.49□□□□□ -0.73
CXCL12-208ENST00000496375 AQP10Q96PS8 301 aa10.49□□□□□ -0.73
CXCL12-208ENST00000496375 ATP5SQ99766 215 aa10.49□□□□□ -0.73
CXCL12-208ENST00000496375 PARD6GQ9BYG4 376 aaPredicted RBP10.49□□□□□ -0.73
CXCL12-208ENST00000496375 SLC25A39Q9BZJ4 359 aaPredicted RBP10.49□□□□□ -0.73
CXCL12-208ENST00000496375 ARL6Q9H0F7 186 aa10.49□□□□□ -0.73
CXCL12-208ENST00000496375 NRN1Q9NPD7 142 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms