RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 OXA1LQ15070 435 aa9.21□□□□□ -0.94
USF1-207ENST00000496363 SPINK13Q1W4C9 94 aa9.21□□□□□ -0.94
USF1-207ENST00000496363 PYDC2Q56P42 97 aa9.21□□□□□ -0.94
USF1-207ENST00000496363 SAMD13Q5VXD3 122 aa9.21□□□□□ -0.94
USF1-207ENST00000496363 GGNBP1Q5YKI7 109 aa9.21□□□□□ -0.94
USF1-207ENST00000496363 ACOT7LQ6ZUV0 252 aa9.21□□□□□ -0.94
USF1-207ENST00000496363 RNF182Q8N6D2 247 aa9.21□□□□□ -0.94
USF1-207ENST00000496363 OR11H7Q8NGC8 314 aa9.21□□□□□ -0.94
USF1-207ENST00000496363 OR1B1Q8NGR6 318 aa9.21□□□□□ -0.94
USF1-207ENST00000496363 IGF2BP2-AS1Q96M15 143 aa9.21□□□□□ -0.94
USF1-207ENST00000496363 APOBP04114 4563 aaKnown RBP9.2□□□□□ -0.94
USF1-207ENST00000496363 CRXO43186 299 aaPredicted RBP9.2□□□□□ -0.94
USF1-207ENST00000496363 SFT2D2O95562 160 aa9.2□□□□□ -0.94
USF1-207ENST00000496363 CFDP00746 253 aaPredicted RBP9.2□□□□□ -0.94
USF1-207ENST00000496363 PRB4P10163 310 aaPredicted RBP9.2□□□□□ -0.94
USF1-207ENST00000496363 AKR1C1Q04828 323 aa9.2□□□□□ -0.94
USF1-207ENST00000496363 FGL1Q08830 312 aa9.2□□□□□ -0.94
USF1-207ENST00000496363 SPANXN5Q5MJ07 72 aa9.2□□□□□ -0.94
USF1-207ENST00000496363 ZNF575Q86XF7 245 aa9.2□□□□□ -0.94
USF1-207ENST00000496363 BAP18Q8IXM2 172 aa9.2□□□□□ -0.94
USF1-207ENST00000496363 TOMM5Q8N4H5 51 aa9.2□□□□□ -0.94
USF1-207ENST00000496363 BPIFCQ8NFQ6 507 aa9.2□□□□□ -0.94
USF1-207ENST00000496363 CIB3Q96Q77 187 aaPredicted RBP9.2□□□□□ -0.94
USF1-207ENST00000496363 TMEM147Q9BVK8 224 aa9.2□□□□□ -0.94
USF1-207ENST00000496363 SLC45A2Q9UMX9 530 aa9.2□□□□□ -0.94
USF1-207ENST00000496363 TMED3Q9Y3Q3 217 aa9.2□□□□□ -0.94
USF1-207ENST00000496363 V9GYH0 126 aa9.2□□□□□ -0.94
USF1-207ENST00000496363 PIGBOS1A0A0B4J2F0 54 aa9.19□□□□□ -0.94
USF1-207ENST00000496363 NOL3O60936 208 aaKnown RBP9.19□□□□□ -0.94
USF1-207ENST00000496363 INSP01308 110 aa9.19□□□□□ -0.94
USF1-207ENST00000496363 RPP30P78346 268 aaKnown RBP9.19□□□□□ -0.94
USF1-207ENST00000496363 RNF212Q495C1 297 aa9.19□□□□□ -0.94
USF1-207ENST00000496363 TRAV12-2A0A075B6T6 113 aa9.18□□□□□ -0.94
USF1-207ENST00000496363 SMCO3A2RU48 225 aa9.18□□□□□ -0.94
USF1-207ENST00000496363 H3BRN7 92 aa9.18□□□□□ -0.94
USF1-207ENST00000496363 DUSP14O95147 198 aaKnown RBP9.18□□□□□ -0.94
USF1-207ENST00000496363 AP3S2P59780 193 aa9.18□□□□□ -0.94
USF1-207ENST00000496363 OR4D5Q8NGN0 318 aa9.18□□□□□ -0.94
USF1-207ENST00000496363 SLC25A39Q9BZJ4 359 aaPredicted RBP9.18□□□□□ -0.94
USF1-207ENST00000496363 STRAPQ9Y3F4 350 aaKnown RBP9.18□□□□□ -0.94
USF1-207ENST00000496363 ADAP1O75689 374 aa9.17□□□□□ -0.94
USF1-207ENST00000496363 CCNKO75909 580 aa9.17□□□□□ -0.94
USF1-207ENST00000496363 DEFB130BP0DP73 79 aa9.17□□□□□ -0.94
USF1-207ENST00000496363 DEFB130AP0DP74 79 aa9.17□□□□□ -0.94
USF1-207ENST00000496363 AZU1P20160 251 aa9.17□□□□□ -0.94
USF1-207ENST00000496363 POLR2GP62487 172 aaKnown RBP eCLIP9.17□□□□□ -0.94
USF1-207ENST00000496363 FCN2Q15485 313 aa9.17□□□□□ -0.94
USF1-207ENST00000496363 C1orf134Q5TEV5 83 aa9.17□□□□□ -0.94
USF1-207ENST00000496363 CYP2G1PQ6ZSU1 146 aa9.17□□□□□ -0.94
USF1-207ENST00000496363 ZNF738Q8NE65 137 aa9.17□□□□□ -0.94
USF1-207ENST00000496363 GPR82Q96P67 336 aa9.17□□□□□ -0.94
USF1-207ENST00000496363 SLC25A21Q9BQT8 299 aaPredicted RBP9.17□□□□□ -0.94
USF1-207ENST00000496363 SHANK2-AS3Q9BTD1 123 aa9.17□□□□□ -0.94
USF1-207ENST00000496363 DNAH5Q8TE73 4624 aa9.17□□□□□ -0.94
USF1-207ENST00000496363 PLAC8L1A1L4L8 177 aa9.16□□□□□ -0.94
USF1-207ENST00000496363 BOLA2-SMG1P6H3BVE0 249 aa9.16□□□□□ -0.94
USF1-207ENST00000496363 IL5P05113 134 aa9.16□□□□□ -0.94
USF1-207ENST00000496363 HIST1H1AQ02539 215 aaPredicted RBP9.16□□□□□ -0.94
USF1-207ENST00000496363 SOHLH1Q5JUK2 328 aa9.16□□□□□ -0.94
USF1-207ENST00000496363 TMEM144Q7Z5S9 345 aa9.16□□□□□ -0.94
USF1-207ENST00000496363 UHRF2Q96PU4 802 aa9.16□□□□□ -0.94
USF1-207ENST00000496363 HIGD1AQ9Y241 93 aa9.16□□□□□ -0.94
USF1-207ENST00000496363 PMS2P5A8MQ11 134 aa9.15□□□□□ -0.94
USF1-207ENST00000496363 LYRM9A8MSI8 78 aa9.15□□□□□ -0.94
USF1-207ENST00000496363 SSSCA1O60232 199 aa9.15□□□□□ -0.94
USF1-207ENST00000496363 HYPMO75409 117 aa9.15□□□□□ -0.94
USF1-207ENST00000496363 LINC00869P0C866 280 aa9.15□□□□□ -0.94
USF1-207ENST00000496363 RAP2BP61225 183 aa9.15□□□□□ -0.94
USF1-207ENST00000496363 RRAS2P62070 204 aaPredicted RBP9.15□□□□□ -0.94
USF1-207ENST00000496363 ID3Q02535 119 aa9.15□□□□□ -0.94
USF1-207ENST00000496363 C15orf53Q8NAA6 179 aa9.15□□□□□ -0.94
USF1-207ENST00000496363 ATG101Q9BSB4 218 aa9.15□□□□□ -0.94
USF1-207ENST00000496363 KRTAP4-5Q9BYR2 181 aa9.15□□□□□ -0.94
USF1-207ENST00000496363 PSENENQ9NZ42 101 aa9.15□□□□□ -0.94
USF1-207ENST00000496363 C9orf170A2RU37 121 aa9.14□□□□□ -0.95
USF1-207ENST00000496363 F5H768 121 aa9.14□□□□□ -0.95
USF1-207ENST00000496363 NUDT3O95989 172 aa9.14□□□□□ -0.95
USF1-207ENST00000496363 OR5G3P0C626 314 aa9.14□□□□□ -0.95
USF1-207ENST00000496363 RPL7P18124 248 aaKnown RBP9.14□□□□□ -0.95
USF1-207ENST00000496363 CXCL3P19876 107 aa9.14□□□□□ -0.95
USF1-207ENST00000496363 TSPOP30536 169 aa9.14□□□□□ -0.95
USF1-207ENST00000496363 S100A7P31151 101 aa9.14□□□□□ -0.95
USF1-207ENST00000496363 RHOBP62745 196 aa9.14□□□□□ -0.95
USF1-207ENST00000496363 TNP2Q05952 138 aa9.14□□□□□ -0.95
USF1-207ENST00000496363 OR8A1Q8NGG7 326 aa9.14□□□□□ -0.95
USF1-207ENST00000496363 LINC01587Q99440 93 aa9.14□□□□□ -0.95
USF1-207ENST00000496363 FLVCR2Q9UPI3 526 aa9.14□□□□□ -0.95
USF1-207ENST00000496363 A0A087X0K7 114 aa9.13□□□□□ -0.95
USF1-207ENST00000496363 SNRPCP09234 159 aaKnown RBP9.13□□□□□ -0.95
USF1-207ENST00000496363 METTL15P1P0C7V9 234 aa9.13□□□□□ -0.95
USF1-207ENST00000496363 HTN1P15515 57 aa9.13□□□□□ -0.95
USF1-207ENST00000496363 PLP1P60201 277 aa9.13□□□□□ -0.95
USF1-207ENST00000496363 SLC38A11Q08AI6 406 aa9.13□□□□□ -0.95
USF1-207ENST00000496363 PSG3Q16557 428 aa9.13□□□□□ -0.95
USF1-207ENST00000496363 PATE2Q6UY27 113 aa9.13□□□□□ -0.95
USF1-207ENST00000496363 CCDC190Q86UF4 302 aa9.13□□□□□ -0.95
USF1-207ENST00000496363 ARL6Q9H0F7 186 aa9.13□□□□□ -0.95
USF1-207ENST00000496363 NBDYA0A0U1RRE5 68 aa9.12□□□□□ -0.95
USF1-207ENST00000496363 MRPS12O15235 138 aaKnown RBP9.12□□□□□ -0.95
USF1-207ENST00000496363 SCGB1D2O95969 90 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms