RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 TPPP2P59282 170 aa10.58□□□□□ -0.72
SPTBN1-205ENST00000496323 SFRP2Q96HF1 295 aa10.58□□□□□ -0.72
SPTBN1-205ENST00000496323 TCEAL7Q9BRU2 100 aa10.58□□□□□ -0.72
SPTBN1-205ENST00000496323 PRDM13Q9H4Q3 707 aa10.58□□□□□ -0.72
SPTBN1-205ENST00000496323 VPREB3Q9UKI3 123 aa10.58□□□□□ -0.72
SPTBN1-205ENST00000496323 TEX15Q9BXT5 2789 aa10.58□□□□□ -0.72
SPTBN1-205ENST00000496323 AKAP9Q99996 3911 aa10.58□□□□□ -0.72
SPTBN1-205ENST00000496323 PPP5D1E7EU14 171 aa10.58□□□□□ -0.72
SPTBN1-205ENST00000496323 H3BUA1 57 aa10.58□□□□□ -0.72
SPTBN1-205ENST00000496323 SLC25A5P05141 298 aaKnown RBP10.58□□□□□ -0.72
SPTBN1-205ENST00000496323 CD99P14209 185 aa10.58□□□□□ -0.72
SPTBN1-205ENST00000496323 TEX38Q6PEX7 206 aa10.58□□□□□ -0.72
SPTBN1-205ENST00000496323 GNB4Q9HAV0 340 aa10.58□□□□□ -0.72
SPTBN1-205ENST00000496323 CDC42EP3Q9UKI2 254 aa10.58□□□□□ -0.72
SPTBN1-205ENST00000496323 MXRA5Q9NR99 2828 aa10.58□□□□□ -0.72
SPTBN1-205ENST00000496323 TRAV34A0A0B4J273 112 aa10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 CLPSL1A2RUU4 121 aa10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 OR5I1Q13606 314 aa10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 EXOC3-AS1Q8N2X6 119 aa10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 OR4F17Q8NGA8 305 aa10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 MLXQ9UH92 298 aa10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 RABAC1Q9UI14 185 aa10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 UNC79Q9P2D8 2635 aa10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 GCN1Q92616 2671 aaKnown RBP10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 BMPR1BO00238 502 aa10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 SLC17A3O00476 420 aa10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 ISLRO14498 428 aa10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 HOXA3O43365 443 aaPredicted RBP10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 GALR1P47211 349 aa10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 TAS2R60P59551 318 aa10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 RPL15P61313 204 aaKnown RBP10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 LCNL1Q6ZST4 164 aa10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 C5orf17Q8NAS9 161 aa10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 ATP6V0BQ99437 205 aa10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 FOXC2Q99958 501 aa10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 OTORQ9NRC9 128 aa10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 ZNF580Q9UK33 172 aa10.57□□□□□ -0.72
SPTBN1-205ENST00000496323 ITPR3Q14573 2671 aa10.56□□□□□ -0.72
SPTBN1-205ENST00000496323 TRBV12-3P01733 135 aa10.56□□□□□ -0.72
SPTBN1-205ENST00000496323 CNN1P51911 297 aaKnown RBP10.56□□□□□ -0.72
SPTBN1-205ENST00000496323 SIGLEC15Q6ZMC9 328 aa10.56□□□□□ -0.72
SPTBN1-205ENST00000496323 IL17RELQ6ZVW7 336 aa10.56□□□□□ -0.72
SPTBN1-205ENST00000496323 S100A7AQ86SG5 101 aa10.56□□□□□ -0.72
SPTBN1-205ENST00000496323 ZFP82Q8N141 532 aa10.56□□□□□ -0.72
SPTBN1-205ENST00000496323 TRBV24-1A0A075B6N3 115 aa10.56□□□□□ -0.72
SPTBN1-205ENST00000496323 TCRAP04437 139 aa10.56□□□□□ -0.72
SPTBN1-205ENST00000496323 PF4V1P10720 104 aa10.56□□□□□ -0.72
SPTBN1-205ENST00000496323 USMG5Q96IX5 58 aa10.56□□□□□ -0.72
SPTBN1-205ENST00000496323 PYGO2Q9BRQ0 406 aa10.56□□□□□ -0.72
SPTBN1-205ENST00000496323 ZMAT5Q9UDW3 170 aaKnown RBP10.56□□□□□ -0.72
SPTBN1-205ENST00000496323 RNF24Q9Y225 148 aa10.56□□□□□ -0.72
SPTBN1-205ENST00000496323 KLF12Q9Y4X4 402 aa10.56□□□□□ -0.72
SPTBN1-205ENST00000496323 SMAD5-AS1Q9Y6J3 95 aa10.56□□□□□ -0.72
SPTBN1-205ENST00000496323 GCGP01275 180 aa10.55□□□□□ -0.72
SPTBN1-205ENST00000496323 KRTAP1-1Q07627 177 aa10.55□□□□□ -0.72
SPTBN1-205ENST00000496323 TMEM183BQ1AE95 376 aa10.55□□□□□ -0.72
SPTBN1-205ENST00000496323 NHLRC2Q8NBF2 726 aa10.55□□□□□ -0.72
SPTBN1-205ENST00000496323 FAM210BQ96KR6 192 aa10.55□□□□□ -0.72
SPTBN1-205ENST00000496323 SGK494Q96LW2 274 aa10.55□□□□□ -0.72
SPTBN1-205ENST00000496323 ATG101Q9BSB4 218 aa10.55□□□□□ -0.72
SPTBN1-205ENST00000496323 RPH3ALQ9UNE2 315 aa10.55□□□□□ -0.72
SPTBN1-205ENST00000496323 ITPR2Q14571 2701 aa10.55□□□□□ -0.72
SPTBN1-205ENST00000496323 PPP1R2P9O14990 202 aa10.54□□□□□ -0.72
SPTBN1-205ENST00000496323 IGHV3-11P01762 117 aa10.54□□□□□ -0.72
SPTBN1-205ENST00000496323 RPS10P46783 165 aaKnown RBP10.54□□□□□ -0.72
SPTBN1-205ENST00000496323 RAB9AP51151 201 aa10.54□□□□□ -0.72
SPTBN1-205ENST00000496323 OR10G8Q8NGN5 311 aa10.54□□□□□ -0.72
SPTBN1-205ENST00000496323 OR5B12Q96R08 314 aa10.54□□□□□ -0.72
SPTBN1-205ENST00000496323 CCDC168Q8NDH2 2452 aa10.54□□□□□ -0.72
SPTBN1-205ENST00000496323 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.54□□□□□ -0.72
SPTBN1-205ENST00000496323 BUB3O43684 328 aa10.54□□□□□ -0.72
SPTBN1-205ENST00000496323 RPL7P18124 248 aaKnown RBP10.54□□□□□ -0.72
SPTBN1-205ENST00000496323 FLI1Q01543 452 aaPredicted RBP10.54□□□□□ -0.72
SPTBN1-205ENST00000496323 RELQ04864 619 aaPredicted RBP10.54□□□□□ -0.72
SPTBN1-205ENST00000496323 C10orf99Q6UWK7 81 aa10.54□□□□□ -0.72
SPTBN1-205ENST00000496323 C1orf196B1AJZ1 125 aa10.53□□□□□ -0.72
SPTBN1-205ENST00000496323 APOHP02749 345 aaPredicted RBP10.53□□□□□ -0.72
SPTBN1-205ENST00000496323 ARL3P36405 182 aa10.53□□□□□ -0.72
SPTBN1-205ENST00000496323 SRP14P37108 136 aaKnown RBP10.53□□□□□ -0.72
SPTBN1-205ENST00000496323 FAM3BP58499 235 aaPredicted RBP10.53□□□□□ -0.72
SPTBN1-205ENST00000496323 BAGE2Q86Y30 109 aa10.53□□□□□ -0.72
SPTBN1-205ENST00000496323 C1QL4Q86Z23 238 aa10.53□□□□□ -0.72
SPTBN1-205ENST00000496323 OR8I2Q8N0Y5 310 aa10.53□□□□□ -0.72
SPTBN1-205ENST00000496323 LYPD1Q8N2G4 141 aa10.53□□□□□ -0.72
SPTBN1-205ENST00000496323 SIGLECL1Q8N7X8 197 aa10.53□□□□□ -0.72
SPTBN1-205ENST00000496323 RNASE7Q9H1E1 156 aaKnown RBP10.53□□□□□ -0.72
SPTBN1-205ENST00000496323 ZNF702PQ9H963 129 aa10.53□□□□□ -0.72
SPTBN1-205ENST00000496323 GGCTO75223 188 aaKnown RBP10.53□□□□□ -0.72
SPTBN1-205ENST00000496323 IGHG4P01861 327 aa10.53□□□□□ -0.72
SPTBN1-205ENST00000496323 PSMB8P28062 276 aa10.53□□□□□ -0.72
SPTBN1-205ENST00000496323 ERVFC1-1P60608 527 aa10.53□□□□□ -0.72
SPTBN1-205ENST00000496323 PDE6HQ13956 83 aa10.53□□□□□ -0.72
SPTBN1-205ENST00000496323 ZNF207O43670 478 aaKnown RBP10.52□□□□□ -0.73
SPTBN1-205ENST00000496323 IGLV2-11P01706 119 aa10.52□□□□□ -0.73
SPTBN1-205ENST00000496323 PRB4P10163 310 aaPredicted RBP10.52□□□□□ -0.73
SPTBN1-205ENST00000496323 MGST1P10620 155 aaKnown RBP10.52□□□□□ -0.73
SPTBN1-205ENST00000496323 S100PP25815 95 aa10.52□□□□□ -0.73
SPTBN1-205ENST00000496323 OR4X2Q8NGF9 303 aa10.52□□□□□ -0.73
SPTBN1-205ENST00000496323 DUX5Q96PT3 197 aa10.52□□□□□ -0.73
SPTBN1-205ENST00000496323 IMMP2LQ96T52 175 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms