RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 SLC25A39Q9BZJ4 359 aaPredicted RBP8.44□□□□□ -1.06
SHROOM1-206ENST00000495680 DNAH5Q8TE73 4624 aa8.44□□□□□ -1.06
SHROOM1-206ENST00000495680 F5H768 121 aa8.43□□□□□ -1.06
SHROOM1-206ENST00000495680 H3BP45 60 aa8.43□□□□□ -1.06
SHROOM1-206ENST00000495680 WRBO00258 174 aa8.43□□□□□ -1.06
SHROOM1-206ENST00000495680 NUDT3O95989 172 aa8.43□□□□□ -1.06
SHROOM1-206ENST00000495680 ANXA3P12429 323 aa8.43□□□□□ -1.06
SHROOM1-206ENST00000495680 SRPXP78539 464 aa8.43□□□□□ -1.06
SHROOM1-206ENST00000495680 FGL1Q08830 312 aa8.43□□□□□ -1.06
SHROOM1-206ENST00000495680 SAMD13Q5VXD3 122 aa8.43□□□□□ -1.06
SHROOM1-206ENST00000495680 GGNBP1Q5YKI7 109 aa8.43□□□□□ -1.06
SHROOM1-206ENST00000495680 OR1B1Q8NGR6 318 aa8.43□□□□□ -1.06
SHROOM1-206ENST00000495680 LINC00588Q9Y4M8 146 aa8.43□□□□□ -1.06
SHROOM1-206ENST00000495680 LYRM9A8MSI8 78 aa8.42□□□□□ -1.06
SHROOM1-206ENST00000495680 H3BRN7 92 aa8.42□□□□□ -1.06
SHROOM1-206ENST00000495680 VAMP1P23763 118 aa8.42□□□□□ -1.06
SHROOM1-206ENST00000495680 TNFSF8P32971 234 aa8.42□□□□□ -1.06
SHROOM1-206ENST00000495680 FAM3BP58499 235 aaPredicted RBP8.42□□□□□ -1.06
SHROOM1-206ENST00000495680 SPANXN5Q5MJ07 72 aa8.42□□□□□ -1.06
SHROOM1-206ENST00000495680 ACOT7LQ6ZUV0 252 aa8.42□□□□□ -1.06
SHROOM1-206ENST00000495680 C6orf223Q8N319 242 aa8.42□□□□□ -1.06
SHROOM1-206ENST00000495680 OR4D5Q8NGN0 318 aa8.42□□□□□ -1.06
SHROOM1-206ENST00000495680 TRIM63Q969Q1 353 aa8.42□□□□□ -1.06
SHROOM1-206ENST00000495680 TMEM147Q9BVK8 224 aa8.42□□□□□ -1.06
SHROOM1-206ENST00000495680 SLIRPQ9GZT3 109 aaKnown RBP8.42□□□□□ -1.06
SHROOM1-206ENST00000495680 CCDC59Q9P031 241 aaKnown RBP8.42□□□□□ -1.06
SHROOM1-206ENST00000495680 SLC45A2Q9UMX9 530 aa8.42□□□□□ -1.06
SHROOM1-206ENST00000495680 DUXBA0A1W2PPF3 345 aa8.41□□□□□ -1.06
SHROOM1-206ENST00000495680 BOLA2-SMG1P6H3BVE0 249 aa8.41□□□□□ -1.06
SHROOM1-206ENST00000495680 SYNGR2O43760 224 aa8.41□□□□□ -1.06
SHROOM1-206ENST00000495680 DUSP14O95147 198 aaKnown RBP8.41□□□□□ -1.06
SHROOM1-206ENST00000495680 CFDP00746 253 aaPredicted RBP8.41□□□□□ -1.06
SHROOM1-206ENST00000495680 TSPOP30536 169 aa8.41□□□□□ -1.06
SHROOM1-206ENST00000495680 AKR1C1Q04828 323 aa8.41□□□□□ -1.06
SHROOM1-206ENST00000495680 PPP1R1AQ13522 171 aa8.41□□□□□ -1.06
SHROOM1-206ENST00000495680 TMEM128Q5BJH2 165 aa8.41□□□□□ -1.06
SHROOM1-206ENST00000495680 MAPKAPK5-AS1Q8N8E1 139 aa8.41□□□□□ -1.06
SHROOM1-206ENST00000495680 LRTM2Q8N967 370 aa8.41□□□□□ -1.06
SHROOM1-206ENST00000495680 ZNF738Q8NE65 137 aa8.41□□□□□ -1.06
SHROOM1-206ENST00000495680 BPIFCQ8NFQ6 507 aa8.41□□□□□ -1.06
SHROOM1-206ENST00000495680 RNF141Q8WVD5 230 aa8.41□□□□□ -1.06
SHROOM1-206ENST00000495680 MRPS26Q9BYN8 205 aaKnown RBP8.41□□□□□ -1.06
SHROOM1-206ENST00000495680 KRTAP1-5Q9BYS1 174 aa8.41□□□□□ -1.06
SHROOM1-206ENST00000495680 RABL2AQ9UBK7 228 aaPredicted RBP8.41□□□□□ -1.06
SHROOM1-206ENST00000495680 RSL24D1Q9UHA3 163 aaKnown RBP8.41□□□□□ -1.06
SHROOM1-206ENST00000495680 RABL2BQ9UNT1 228 aa8.41□□□□□ -1.06
SHROOM1-206ENST00000495680 FABP12A6NFH5 140 aa8.4□□□□□ -1.06
SHROOM1-206ENST00000495680 MED6O75586 246 aa8.4□□□□□ -1.06
SHROOM1-206ENST00000495680 CCNKO75909 580 aa8.4□□□□□ -1.06
SHROOM1-206ENST00000495680 CDK2AP2O75956 126 aa8.4□□□□□ -1.06
SHROOM1-206ENST00000495680 HOXB5P09067 269 aa8.4□□□□□ -1.06
SHROOM1-206ENST00000495680 SLC25A6P12236 298 aa8.4□□□□□ -1.06
SHROOM1-206ENST00000495680 HIST1H1AQ02539 215 aaPredicted RBP8.4□□□□□ -1.06
SHROOM1-206ENST00000495680 KIR3DS1Q14943 382 aa8.4□□□□□ -1.06
SHROOM1-206ENST00000495680 OR8A1Q8NGG7 326 aa8.4□□□□□ -1.06
SHROOM1-206ENST00000495680 UHRF2Q96PU4 802 aa8.4□□□□□ -1.06
SHROOM1-206ENST00000495680 LINC01587Q99440 93 aa8.4□□□□□ -1.06
SHROOM1-206ENST00000495680 SHANK2-AS3Q9BTD1 123 aa8.4□□□□□ -1.06
SHROOM1-206ENST00000495680 PMS2P5A8MQ11 134 aa8.39□□□□□ -1.07
SHROOM1-206ENST00000495680 SFT2D2O95562 160 aa8.39□□□□□ -1.07
SHROOM1-206ENST00000495680 ATP5G1P05496 136 aa8.39□□□□□ -1.07
SHROOM1-206ENST00000495680 SNRPCP09234 159 aaKnown RBP8.39□□□□□ -1.07
SHROOM1-206ENST00000495680 HTN1P15515 57 aa8.39□□□□□ -1.07
SHROOM1-206ENST00000495680 CXCL3P19876 107 aa8.39□□□□□ -1.07
SHROOM1-206ENST00000495680 ATP5G3P48201 142 aa8.39□□□□□ -1.07
SHROOM1-206ENST00000495680 CYP2G1PQ6ZSU1 146 aa8.39□□□□□ -1.07
SHROOM1-206ENST00000495680 TMEM144Q7Z5S9 345 aa8.39□□□□□ -1.07
SHROOM1-206ENST00000495680 RAB2BQ8WUD1 216 aa8.39□□□□□ -1.07
SHROOM1-206ENST00000495680 GPR82Q96P67 336 aa8.39□□□□□ -1.07
SHROOM1-206ENST00000495680 CIB3Q96Q77 187 aaPredicted RBP8.39□□□□□ -1.07
SHROOM1-206ENST00000495680 PARD6GQ9BYG4 376 aaPredicted RBP8.39□□□□□ -1.07
SHROOM1-206ENST00000495680 SMCO3A2RU48 225 aa8.38□□□□□ -1.07
SHROOM1-206ENST00000495680 CBY3A6NI87 242 aa8.38□□□□□ -1.07
SHROOM1-206ENST00000495680 ADAP1O75689 374 aa8.38□□□□□ -1.07
SHROOM1-206ENST00000495680 IL5P05113 134 aa8.38□□□□□ -1.07
SHROOM1-206ENST00000495680 OR5G3P0C626 314 aa8.38□□□□□ -1.07
SHROOM1-206ENST00000495680 LINC00869P0C866 280 aa8.38□□□□□ -1.07
SHROOM1-206ENST00000495680 CCL18P55774 89 aa8.38□□□□□ -1.07
SHROOM1-206ENST00000495680 POLR2GP62487 172 aaKnown RBP eCLIP8.38□□□□□ -1.07
SHROOM1-206ENST00000495680 RHOBP62745 196 aa8.38□□□□□ -1.07
SHROOM1-206ENST00000495680 SSX7Q7RTT5 188 aa8.38□□□□□ -1.07
SHROOM1-206ENST00000495680 NOP10Q9NPE3 64 aaKnown RBP8.38□□□□□ -1.07
SHROOM1-206ENST00000495680 HIGD1AQ9Y241 93 aa8.38□□□□□ -1.07
SHROOM1-206ENST00000495680 STRAPQ9Y3F4 350 aaKnown RBP8.38□□□□□ -1.07
SHROOM1-206ENST00000495680 A0A087X0K7 114 aa8.37□□□□□ -1.07
SHROOM1-206ENST00000495680 H3BMQ9 156 aa8.37□□□□□ -1.07
SHROOM1-206ENST00000495680 MRPS12O15235 138 aaKnown RBP8.37□□□□□ -1.07
SHROOM1-206ENST00000495680 HYPMO75409 117 aa8.37□□□□□ -1.07
SHROOM1-206ENST00000495680 RPL7P18124 248 aaKnown RBP8.37□□□□□ -1.07
SHROOM1-206ENST00000495680 TMBIM6P55061 237 aa8.37□□□□□ -1.07
SHROOM1-206ENST00000495680 TAS2R60P59551 318 aa8.37□□□□□ -1.07
SHROOM1-206ENST00000495680 KRTAP10-2P60368 255 aa8.37□□□□□ -1.07
SHROOM1-206ENST00000495680 RAP2BP61225 183 aa8.37□□□□□ -1.07
SHROOM1-206ENST00000495680 B2MP61769 119 aa8.37□□□□□ -1.07
SHROOM1-206ENST00000495680 RPP30P78346 268 aaKnown RBP8.37□□□□□ -1.07
SHROOM1-206ENST00000495680 PSG3Q16557 428 aa8.37□□□□□ -1.07
SHROOM1-206ENST00000495680 PATE2Q6UY27 113 aa8.37□□□□□ -1.07
SHROOM1-206ENST00000495680 SPATA12Q7Z6I5 190 aa8.37□□□□□ -1.07
SHROOM1-206ENST00000495680 MCFD2Q8NI22 146 aa8.37□□□□□ -1.07
SHROOM1-206ENST00000495680 RNASE8Q8TDE3 154 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms