RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 TMEM37Q8WXS4 190 aa12.8□□□□□ -0.36
HDAC6-235ENST00000495515 FAM110AQ9BQ89 295 aa12.8□□□□□ -0.36
HDAC6-235ENST00000495515 RSG1Q9BU20 258 aa12.8□□□□□ -0.36
HDAC6-235ENST00000495515 OR11H12B2RN74 326 aa12.79□□□□□ -0.36
HDAC6-235ENST00000495515 JTBO76095 146 aa12.79□□□□□ -0.36
HDAC6-235ENST00000495515 MEOX2P50222 304 aa12.79□□□□□ -0.36
HDAC6-235ENST00000495515 KCNRGQ8N5I3 272 aa12.79□□□□□ -0.36
HDAC6-235ENST00000495515 HSD17B11Q8NBQ5 300 aa12.79□□□□□ -0.36
HDAC6-235ENST00000495515 OR11H4Q8NGC9 324 aa12.79□□□□□ -0.36
HDAC6-235ENST00000495515 SLC25A32Q9H2D1 315 aa12.79□□□□□ -0.36
HDAC6-235ENST00000495515 A0A1B0GVG6 124 aa12.78□□□□□ -0.36
HDAC6-235ENST00000495515 K7EQG2 157 aa12.78□□□□□ -0.36
HDAC6-235ENST00000495515 ATF4P18848 351 aaPredicted RBP12.78□□□□□ -0.36
HDAC6-235ENST00000495515 FFAR4Q5NUL3 377 aa12.78□□□□□ -0.36
HDAC6-235ENST00000495515 LEMD1Q68G75 181 aa12.78□□□□□ -0.36
HDAC6-235ENST00000495515 BPIFA4PQ86YQ2 179 aa12.78□□□□□ -0.36
HDAC6-235ENST00000495515 GNPNAT1Q96EK6 184 aaPredicted RBP12.78□□□□□ -0.36
HDAC6-235ENST00000495515 ARPC5LQ9BPX5 153 aa12.78□□□□□ -0.36
HDAC6-235ENST00000495515 TUBA4BQ9H853 241 aa12.78□□□□□ -0.36
HDAC6-235ENST00000495515 SEPSECSQ9HD40 501 aaKnown RBP12.78□□□□□ -0.36
HDAC6-235ENST00000495515 C1QBP02746 253 aa12.77□□□□□ -0.37
HDAC6-235ENST00000495515 ID1P41134 155 aa12.77□□□□□ -0.37
HDAC6-235ENST00000495515 SNRPD3P62318 126 aaKnown RBP12.77□□□□□ -0.37
HDAC6-235ENST00000495515 RPL7L1Q6DKI1 246 aaKnown RBP12.77□□□□□ -0.37
HDAC6-235ENST00000495515 DCANP1Q8TF63 244 aa12.77□□□□□ -0.37
HDAC6-235ENST00000495515 HYLS1Q96M11 299 aa12.77□□□□□ -0.37
HDAC6-235ENST00000495515 PSMG3Q9BT73 122 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-235ENST00000495515 KANTRA0A1W2PQU2 76 aa12.76□□□□□ -0.37
HDAC6-235ENST00000495515 A8MZ25 164 aa12.76□□□□□ -0.37
HDAC6-235ENST00000495515 ATP6V0CP27449 155 aa12.76□□□□□ -0.37
HDAC6-235ENST00000495515 ACOT6Q3I5F7 207 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-235ENST00000495515 FAM78BQ5VT40 261 aa12.76□□□□□ -0.37
HDAC6-235ENST00000495515 MRPL32Q9BYC8 188 aaKnown RBP12.76□□□□□ -0.37
HDAC6-235ENST00000495515 UBQLN2Q9UHD9 624 aa12.76□□□□□ -0.37
HDAC6-235ENST00000495515 PFDN1O60925 122 aa12.75□□□□□ -0.37
HDAC6-235ENST00000495515 MBP02144 154 aa12.75□□□□□ -0.37
HDAC6-235ENST00000495515 IGHV4-30-4P0DP06 118 aa12.75□□□□□ -0.37
HDAC6-235ENST00000495515 SERF2P84101 59 aa12.75□□□□□ -0.37
HDAC6-235ENST00000495515 ODF3L2Q3SX64 289 aa12.75□□□□□ -0.37
HDAC6-235ENST00000495515 GCSAMLQ5JQS6 135 aa12.75□□□□□ -0.37
HDAC6-235ENST00000495515 DEFB125Q8N687 156 aa12.75□□□□□ -0.37
HDAC6-235ENST00000495515 OR2G3Q8NGZ4 309 aa12.75□□□□□ -0.37
HDAC6-235ENST00000495515 MAP6D1Q9H9H5 199 aa12.75□□□□□ -0.37
HDAC6-235ENST00000495515 C19orf73Q9NVV2 129 aa12.75□□□□□ -0.37
HDAC6-235ENST00000495515 CXCL2P19875 107 aa12.74□□□□□ -0.37
HDAC6-235ENST00000495515 M6PRP20645 277 aa12.74□□□□□ -0.37
HDAC6-235ENST00000495515 RHOBP62745 196 aa12.74□□□□□ -0.37
HDAC6-235ENST00000495515 EIF5AP63241 154 aaKnown RBP12.74□□□□□ -0.37
HDAC6-235ENST00000495515 SRD5A3Q9H8P0 318 aa12.74□□□□□ -0.37
HDAC6-235ENST00000495515 FUT9Q9Y231 359 aa12.74□□□□□ -0.37
HDAC6-235ENST00000495515 A0A087X0K7 114 aa12.73□□□□□ -0.37
HDAC6-235ENST00000495515 ISLRO14498 428 aa12.73□□□□□ -0.37
HDAC6-235ENST00000495515 BCL2L11O43521 198 aa12.73□□□□□ -0.37
HDAC6-235ENST00000495515 ZNF688P0C7X2 276 aa12.73□□□□□ -0.37
HDAC6-235ENST00000495515 PSMB3P49720 205 aa12.73□□□□□ -0.37
HDAC6-235ENST00000495515 TAS2R45P59539 299 aa12.73□□□□□ -0.37
HDAC6-235ENST00000495515 DEFB131AP59861 70 aa12.73□□□□□ -0.37
HDAC6-235ENST00000495515 ZFP69Q49AA0 526 aa12.73□□□□□ -0.37
HDAC6-235ENST00000495515 MORN5Q5VZ52 161 aa12.73□□□□□ -0.37
HDAC6-235ENST00000495515 LRRC20Q8TCA0 184 aa12.73□□□□□ -0.37
HDAC6-235ENST00000495515 C16orf92Q96LL3 132 aa12.73□□□□□ -0.37
HDAC6-235ENST00000495515 WFDC10AQ9H1F0 79 aa12.73□□□□□ -0.37
HDAC6-235ENST00000495515 TRAV5A0A0B4J249 113 aa12.72□□□□□ -0.37
HDAC6-235ENST00000495515 A0A1W2PPV4 95 aa12.72□□□□□ -0.37
HDAC6-235ENST00000495515 C4BPBP20851 252 aa12.72□□□□□ -0.37
HDAC6-235ENST00000495515 GUK1Q16774 197 aa12.72□□□□□ -0.37
HDAC6-235ENST00000495515 PSMG4Q5JS54 123 aa12.72□□□□□ -0.37
HDAC6-235ENST00000495515 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.72□□□□□ -0.37
HDAC6-235ENST00000495515 TMUB2Q71RG4 321 aa12.72□□□□□ -0.37
HDAC6-235ENST00000495515 FAM24BQ8N5W8 94 aa12.72□□□□□ -0.37
HDAC6-235ENST00000495515 ZNF471Q9BX82 626 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-235ENST00000495515 CYTL1Q9NRR1 136 aa12.72□□□□□ -0.37
HDAC6-235ENST00000495515 TMEM14CQ9P0S9 112 aa12.72□□□□□ -0.37
HDAC6-235ENST00000495515 SOCS3O14543 225 aa12.71□□□□□ -0.37
HDAC6-235ENST00000495515 MRPS12O15235 138 aaKnown RBP12.71□□□□□ -0.37
HDAC6-235ENST00000495515 FRMD6-AS1P0C7T7 363 aa12.71□□□□□ -0.37
HDAC6-235ENST00000495515 LCN15Q6UWW0 184 aa12.71□□□□□ -0.37
HDAC6-235ENST00000495515 MIR17HGQ75NE6 70 aa12.71□□□□□ -0.37
HDAC6-235ENST00000495515 APRG1Q8IVJ8 170 aa12.71□□□□□ -0.37
HDAC6-235ENST00000495515 OR10G4Q8NGN3 311 aa12.71□□□□□ -0.37
HDAC6-235ENST00000495515 OR10G9Q8NGN4 311 aa12.71□□□□□ -0.37
HDAC6-235ENST00000495515 OR10G7Q8NGN6 311 aa12.71□□□□□ -0.37
HDAC6-235ENST00000495515 LINC00052Q96N35 136 aa12.71□□□□□ -0.37
HDAC6-235ENST00000495515 HRH4Q9H3N8 390 aa12.71□□□□□ -0.37
HDAC6-235ENST00000495515 RAB2AP61019 212 aa12.7□□□□□ -0.38
HDAC6-235ENST00000495515 KHDC3LQ587J8 217 aa12.7□□□□□ -0.38
HDAC6-235ENST00000495515 SPATA31B1PQ5VZV4 182 aa12.7□□□□□ -0.38
HDAC6-235ENST00000495515 B9D2Q9BPU9 175 aa12.7□□□□□ -0.38
HDAC6-235ENST00000495515 SLC50A1Q9BRV3 221 aa12.7□□□□□ -0.38
HDAC6-235ENST00000495515 SH3BGRL3Q9H299 93 aa12.7□□□□□ -0.38
HDAC6-235ENST00000495515 RFNGQ9Y644 331 aa12.7□□□□□ -0.38
HDAC6-235ENST00000495515 LOC102724200A0A096LPH7 203 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-235ENST00000495515 IGLC2P0DOY2 106 aa12.69□□□□□ -0.38
HDAC6-235ENST00000495515 HIST1H1EP10412 219 aaKnown RBP12.69□□□□□ -0.38
HDAC6-235ENST00000495515 LGALSLQ3ZCW2 172 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-235ENST00000495515 TMEM41BQ5BJD5 291 aa12.69□□□□□ -0.38
HDAC6-235ENST00000495515 FAM122CQ6P4D5 195 aa12.69□□□□□ -0.38
HDAC6-235ENST00000495515 SLC25A2Q9BXI2 301 aa12.69□□□□□ -0.38
HDAC6-235ENST00000495515 OR51M1Q9H341 326 aa12.69□□□□□ -0.38
HDAC6-235ENST00000495515 RPRMQ9NS64 109 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms