RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 NUPR2A6NF83 97 aa12.88□□□□□ -0.35
HDAC4-211ENST00000494800 FAM24AA6NFZ4 105 aa12.88□□□□□ -0.35
HDAC4-211ENST00000494800 SOCS3O14543 225 aa12.88□□□□□ -0.35
HDAC4-211ENST00000494800 AGPAT2O15120 278 aa12.88□□□□□ -0.35
HDAC4-211ENST00000494800 C4BPBP20851 252 aa12.88□□□□□ -0.35
HDAC4-211ENST00000494800 PMS2P11Q13670 270 aa12.88□□□□□ -0.35
HDAC4-211ENST00000494800 MARVELD1Q9BSK0 173 aa12.88□□□□□ -0.35
HDAC4-211ENST00000494800 MFFQ9GZY8 342 aa12.88□□□□□ -0.35
HDAC4-211ENST00000494800 SAV1Q9H4B6 383 aaPredicted RBP12.88□□□□□ -0.35
HDAC4-211ENST00000494800 LCE6AA0A183 80 aa12.87□□□□□ -0.35
HDAC4-211ENST00000494800 CAMLGP49069 296 aa12.87□□□□□ -0.35
HDAC4-211ENST00000494800 FGL1Q08830 312 aa12.87□□□□□ -0.35
HDAC4-211ENST00000494800 IL15RAQ13261 267 aa12.87□□□□□ -0.35
HDAC4-211ENST00000494800 Q6ZRG5 221 aa12.87□□□□□ -0.35
HDAC4-211ENST00000494800 NMES1Q9C002 83 aa12.87□□□□□ -0.35
HDAC4-211ENST00000494800 ARV1Q9H2C2 271 aa12.87□□□□□ -0.35
HDAC4-211ENST00000494800 C11orf1Q9H5F2 150 aa12.87□□□□□ -0.35
HDAC4-211ENST00000494800 ELOA3CA0A087WX78 387 aaPredicted RBP12.86□□□□□ -0.35
HDAC4-211ENST00000494800 SSNA1O43805 119 aa12.86□□□□□ -0.35
HDAC4-211ENST00000494800 COX7A2P2O60397 106 aa12.86□□□□□ -0.35
HDAC4-211ENST00000494800 GIG44P09565 113 aaPredicted RBP12.86□□□□□ -0.35
HDAC4-211ENST00000494800 MIFP14174 115 aa12.86□□□□□ -0.35
HDAC4-211ENST00000494800 ATP6V1FQ16864 119 aa12.86□□□□□ -0.35
HDAC4-211ENST00000494800 TMEM252Q8N6L7 170 aa12.86□□□□□ -0.35
HDAC4-211ENST00000494800 OR4B1Q8NGF8 309 aa12.86□□□□□ -0.35
HDAC4-211ENST00000494800 LRRC20Q8TCA0 184 aa12.86□□□□□ -0.35
HDAC4-211ENST00000494800 UHRF2Q96PU4 802 aa12.86□□□□□ -0.35
HDAC4-211ENST00000494800 MGST2Q99735 147 aa12.86□□□□□ -0.35
HDAC4-211ENST00000494800 IGKV3-20P01619 116 aa12.85□□□□□ -0.35
HDAC4-211ENST00000494800 BAXQ07812 192 aa12.85□□□□□ -0.35
HDAC4-211ENST00000494800 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.85□□□□□ -0.35
HDAC4-211ENST00000494800 C11orf45Q8TAV5 145 aa12.85□□□□□ -0.35
HDAC4-211ENST00000494800 CLUHP3Q96NS8 147 aa12.85□□□□□ -0.35
HDAC4-211ENST00000494800 SLC25A31Q9H0C2 315 aa12.85□□□□□ -0.35
HDAC4-211ENST00000494800 CLEC5AQ9NY25 188 aa12.85□□□□□ -0.35
HDAC4-211ENST00000494800 KLK5Q9Y337 293 aaPredicted RBP12.85□□□□□ -0.35
HDAC4-211ENST00000494800 IGSF23A1L1A6 192 aa12.84□□□□□ -0.35
HDAC4-211ENST00000494800 ZNF705EA8MWA4 302 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-211ENST00000494800 E5RGE8 158 aa12.84□□□□□ -0.35
HDAC4-211ENST00000494800 SIX6O95475 246 aa12.84□□□□□ -0.35
HDAC4-211ENST00000494800 EWSR1Q01844 656 aaKnown RBP eCLIP12.84□□□□□ -0.35
HDAC4-211ENST00000494800 VWC2Q2TAL6 325 aa12.84□□□□□ -0.35
HDAC4-211ENST00000494800 C10orf113Q5VZT2 155 aa12.84□□□□□ -0.35
HDAC4-211ENST00000494800 LINC00305Q7Z4B0 112 aa12.84□□□□□ -0.35
HDAC4-211ENST00000494800 OR1L4Q8NGR5 311 aa12.84□□□□□ -0.35
HDAC4-211ENST00000494800 XCL2Q9UBD3 114 aa12.84□□□□□ -0.35
HDAC4-211ENST00000494800 WDR83OSQ9Y284 106 aa12.84□□□□□ -0.35
HDAC4-211ENST00000494800 UBE2L5PA0A1B0GUS4 154 aa12.83□□□□□ -0.36
HDAC4-211ENST00000494800 PET100P0DJ07 73 aa12.83□□□□□ -0.36
HDAC4-211ENST00000494800 LRRC37A5PQ49AS3 106 aa12.83□□□□□ -0.36
HDAC4-211ENST00000494800 GDF5OSQ5U4N7 250 aa12.83□□□□□ -0.36
HDAC4-211ENST00000494800 CEMP1Q6PRD7 247 aaPredicted RBP12.83□□□□□ -0.36
HDAC4-211ENST00000494800 PATE2Q6UY27 113 aa12.83□□□□□ -0.36
HDAC4-211ENST00000494800 BPIFA4PQ86YQ2 179 aa12.83□□□□□ -0.36
HDAC4-211ENST00000494800 CSNK1G2-AS1Q8NCQ2 148 aa12.83□□□□□ -0.36
HDAC4-211ENST00000494800 PFDN5Q99471 154 aa12.83□□□□□ -0.36
HDAC4-211ENST00000494800 CSMD3Q7Z407 3707 aa12.82□□□□□ -0.36
HDAC4-211ENST00000494800 A0A087X0K7 114 aa12.82□□□□□ -0.36
HDAC4-211ENST00000494800 IGHV4-28A0A0C4DH34 117 aa12.82□□□□□ -0.36
HDAC4-211ENST00000494800 A0A0J9YX75 114 aa12.82□□□□□ -0.36
HDAC4-211ENST00000494800 DEFB4AO15263 64 aa12.82□□□□□ -0.36
HDAC4-211ENST00000494800 MPDU1O75352 247 aa12.82□□□□□ -0.36
HDAC4-211ENST00000494800 DUSP14O95147 198 aaKnown RBP12.82□□□□□ -0.36
HDAC4-211ENST00000494800 PSG9Q00887 426 aa12.82□□□□□ -0.36
HDAC4-211ENST00000494800 FAM78BQ5VT40 261 aa12.82□□□□□ -0.36
HDAC4-211ENST00000494800 Q8NAQ8 132 aa12.82□□□□□ -0.36
HDAC4-211ENST00000494800 DNAJC4Q9NNZ3 241 aa12.82□□□□□ -0.36
HDAC4-211ENST00000494800 STARD9Q9P2P6 4700 aa12.81□□□□□ -0.36
HDAC4-211ENST00000494800 CXCL2P19875 107 aa12.81□□□□□ -0.36
HDAC4-211ENST00000494800 FGF7P21781 194 aa12.81□□□□□ -0.36
HDAC4-211ENST00000494800 RPL29P47914 159 aaKnown RBP12.81□□□□□ -0.36
HDAC4-211ENST00000494800 DEFB1P60022 68 aa12.81□□□□□ -0.36
HDAC4-211ENST00000494800 ZNF738Q8NE65 137 aa12.81□□□□□ -0.36
HDAC4-211ENST00000494800 PHLDA1Q8WV24 401 aaPredicted RBP12.81□□□□□ -0.36
HDAC4-211ENST00000494800 C20orf173Q96LM9 149 aa12.81□□□□□ -0.36
HDAC4-211ENST00000494800 F6UB75 175 aa12.8□□□□□ -0.36
HDAC4-211ENST00000494800 B2MP61769 119 aa12.8□□□□□ -0.36
HDAC4-211ENST00000494800 MIC13Q5XKP0 118 aa12.8□□□□□ -0.36
HDAC4-211ENST00000494800 LCN15Q6UWW0 184 aa12.8□□□□□ -0.36
HDAC4-211ENST00000494800 C17orf77Q96MU5 243 aa12.8□□□□□ -0.36
HDAC4-211ENST00000494800 HRH4Q9H3N8 390 aa12.8□□□□□ -0.36
HDAC4-211ENST00000494800 X6R8D5 127 aa12.8□□□□□ -0.36
HDAC4-211ENST00000494800 H2BFSP57053 126 aa12.79□□□□□ -0.36
HDAC4-211ENST00000494800 FXYD7P58549 80 aa12.79□□□□□ -0.36
HDAC4-211ENST00000494800 NANOS2P60321 138 aaKnown RBP12.79□□□□□ -0.36
HDAC4-211ENST00000494800 PRR20EP86478 221 aa12.79□□□□□ -0.36
HDAC4-211ENST00000494800 PRR20CP86479 221 aa12.79□□□□□ -0.36
HDAC4-211ENST00000494800 PRR20DP86480 221 aa12.79□□□□□ -0.36
HDAC4-211ENST00000494800 PRR20BP86481 221 aa12.79□□□□□ -0.36
HDAC4-211ENST00000494800 PRR20AP86496 221 aa12.79□□□□□ -0.36
HDAC4-211ENST00000494800 RNF182Q8N6D2 247 aa12.79□□□□□ -0.36
HDAC4-211ENST00000494800 OR5C1Q8NGR4 320 aa12.79□□□□□ -0.36
HDAC4-211ENST00000494800 CHAC2Q8WUX2 184 aa12.79□□□□□ -0.36
HDAC4-211ENST00000494800 PPP1R1CQ8WVI7 109 aa12.79□□□□□ -0.36
HDAC4-211ENST00000494800 TMEM37Q8WXS4 190 aa12.79□□□□□ -0.36
HDAC4-211ENST00000494800 SLC50A1Q9BRV3 221 aa12.79□□□□□ -0.36
HDAC4-211ENST00000494800 SLC39A9Q9NUM3 307 aa12.79□□□□□ -0.36
HDAC4-211ENST00000494800 OR5AC2Q9NZP5 309 aa12.79□□□□□ -0.36
HDAC4-211ENST00000494800 GOLT1BQ9Y3E0 138 aa12.79□□□□□ -0.36
HDAC4-211ENST00000494800 RYR3Q15413 4870 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms