RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 TMEM147Q9BVK8 224 aa16.47■□□□□ 0.23
COL27A1-208ENST00000494780 DUSP14O95147 198 aaKnown RBP16.46■□□□□ 0.23
COL27A1-208ENST00000494780 GATA2P23769 480 aaPredicted RBP16.46■□□□□ 0.23
COL27A1-208ENST00000494780 PPP1R1AQ13522 171 aa16.46■□□□□ 0.23
COL27A1-208ENST00000494780 SPANXN5Q5MJ07 72 aa16.46■□□□□ 0.23
COL27A1-208ENST00000494780 TMEM88Q6PEY1 159 aa16.46■□□□□ 0.23
COL27A1-208ENST00000494780 TMEM182Q6ZP80 229 aaPredicted RBP16.46■□□□□ 0.23
COL27A1-208ENST00000494780 HOXB5P09067 269 aa16.45■□□□□ 0.22
COL27A1-208ENST00000494780 AKR1C1Q04828 323 aa16.45■□□□□ 0.22
COL27A1-208ENST00000494780 STRAPQ9Y3F4 350 aaKnown RBP16.45■□□□□ 0.22
COL27A1-208ENST00000494780 PCLOQ9Y6V0 5065 aa16.45■□□□□ 0.22
COL27A1-208ENST00000494780 INSP01308 110 aa16.44■□□□□ 0.22
COL27A1-208ENST00000494780 CNN1P51911 297 aaKnown RBP16.44■□□□□ 0.22
COL27A1-208ENST00000494780 SOHLH1Q5JUK2 328 aa16.44■□□□□ 0.22
COL27A1-208ENST00000494780 TMEM144Q7Z5S9 345 aa16.44■□□□□ 0.22
COL27A1-208ENST00000494780 OR11H7Q8NGC8 314 aa16.44■□□□□ 0.22
COL27A1-208ENST00000494780 V9GYH0 126 aa16.44■□□□□ 0.22
COL27A1-208ENST00000494780 PKHD1P08F94 4074 aa16.44■□□□□ 0.22
COL27A1-208ENST00000494780 TRAV8-2A0A0B4J237 113 aa16.43■□□□□ 0.22
COL27A1-208ENST00000494780 LYRM9A8MSI8 78 aa16.43■□□□□ 0.22
COL27A1-208ENST00000494780 B2MP61769 119 aa16.43■□□□□ 0.22
COL27A1-208ENST00000494780 ACOT7LQ6ZUV0 252 aa16.43■□□□□ 0.22
COL27A1-208ENST00000494780 C15orf53Q8NAA6 179 aa16.43■□□□□ 0.22
COL27A1-208ENST00000494780 H3BP45 60 aa16.42■□□□□ 0.22
COL27A1-208ENST00000494780 H3BRN7 92 aa16.42■□□□□ 0.22
COL27A1-208ENST00000494780 CRXO43186 299 aaPredicted RBP16.42■□□□□ 0.22
COL27A1-208ENST00000494780 FAM3BP58499 235 aaPredicted RBP16.42■□□□□ 0.22
COL27A1-208ENST00000494780 SPINK13Q1W4C9 94 aa16.42■□□□□ 0.22
COL27A1-208ENST00000494780 SLC25A39Q9BZJ4 359 aaPredicted RBP16.42■□□□□ 0.22
COL27A1-208ENST00000494780 ZNF705GA8MUZ8 300 aaPredicted RBP16.41■□□□□ 0.22
COL27A1-208ENST00000494780 M0R2Z0 102 aa16.41■□□□□ 0.22
COL27A1-208ENST00000494780 UBE2MP61081 183 aaKnown RBP16.41■□□□□ 0.22
COL27A1-208ENST00000494780 IGFL4Q6B9Z1 124 aa16.41■□□□□ 0.22
COL27A1-208ENST00000494780 CYP2G1PQ6ZSU1 146 aa16.41■□□□□ 0.22
COL27A1-208ENST00000494780 SHANK2-AS3Q9BTD1 123 aa16.41■□□□□ 0.22
COL27A1-208ENST00000494780 IL5P05113 134 aa16.4■□□□□ 0.22
COL27A1-208ENST00000494780 RPL7P18124 248 aaKnown RBP16.4■□□□□ 0.22
COL27A1-208ENST00000494780 TSPOP30536 169 aa16.4■□□□□ 0.22
COL27A1-208ENST00000494780 RAP2BP61225 183 aa16.4■□□□□ 0.22
COL27A1-208ENST00000494780 ID3Q02535 119 aa16.4■□□□□ 0.22
COL27A1-208ENST00000494780 FGL1Q08830 312 aa16.4■□□□□ 0.22
COL27A1-208ENST00000494780 RNF182Q8N6D2 247 aa16.4■□□□□ 0.22
COL27A1-208ENST00000494780 HIGD1AQ9Y241 93 aa16.4■□□□□ 0.22
COL27A1-208ENST00000494780 DNAH11Q96DT5 4516 aa16.4■□□□□ 0.22
COL27A1-208ENST00000494780 SMCO3A2RU48 225 aa16.39■□□□□ 0.21
COL27A1-208ENST00000494780 C1orf134Q5TEV5 83 aa16.39■□□□□ 0.21
COL27A1-208ENST00000494780 ZNF738Q8NE65 137 aa16.39■□□□□ 0.21
COL27A1-208ENST00000494780 NACAE9PAV3 2078 aa16.39■□□□□ 0.21
COL27A1-208ENST00000494780 HYPMO75409 117 aa16.38■□□□□ 0.21
COL27A1-208ENST00000494780 PRM2P04554 102 aa16.38■□□□□ 0.21
COL27A1-208ENST00000494780 S100A5P33763 92 aa16.38■□□□□ 0.21
COL27A1-208ENST00000494780 PLP1P60201 277 aa16.38■□□□□ 0.21
COL27A1-208ENST00000494780 SELENOTP62341 195 aa16.38■□□□□ 0.21
COL27A1-208ENST00000494780 POLR2GP62487 172 aaKnown RBP eCLIP16.38■□□□□ 0.21
COL27A1-208ENST00000494780 BAP18Q8IXM2 172 aa16.38■□□□□ 0.21
COL27A1-208ENST00000494780 PSENENQ9NZ42 101 aa16.38■□□□□ 0.21
COL27A1-208ENST00000494780 PKD1P98161 4303 aa16.38■□□□□ 0.21
COL27A1-208ENST00000494780 C9orf170A2RU37 121 aa16.37■□□□□ 0.21
COL27A1-208ENST00000494780 BOLA2-SMG1P6H3BVE0 249 aa16.37■□□□□ 0.21
COL27A1-208ENST00000494780 ADAP1O75689 374 aa16.37■□□□□ 0.21
COL27A1-208ENST00000494780 S100A7AQ86SG5 101 aa16.37■□□□□ 0.21
COL27A1-208ENST00000494780 CCDC190Q86UF4 302 aa16.37■□□□□ 0.21
COL27A1-208ENST00000494780 PMS2P5A8MQ11 134 aa16.36■□□□□ 0.21
COL27A1-208ENST00000494780 LINC00869P0C866 280 aa16.36■□□□□ 0.21
COL27A1-208ENST00000494780 DEFB130BP0DP73 79 aa16.36■□□□□ 0.21
COL27A1-208ENST00000494780 DEFB130AP0DP74 79 aa16.36■□□□□ 0.21
COL27A1-208ENST00000494780 ATG101Q9BSB4 218 aa16.36■□□□□ 0.21
COL27A1-208ENST00000494780 TRAV12-2A0A075B6T6 113 aa16.35■□□□□ 0.21
COL27A1-208ENST00000494780 A0A087X0K7 114 aa16.35■□□□□ 0.21
COL27A1-208ENST00000494780 PLAC8L1A1L4L8 177 aa16.35■□□□□ 0.21
COL27A1-208ENST00000494780 OR5G3P0C626 314 aa16.35■□□□□ 0.21
COL27A1-208ENST00000494780 CXCL3P19876 107 aa16.35■□□□□ 0.21
COL27A1-208ENST00000494780 HIST1H1AQ02539 215 aaPredicted RBP16.35■□□□□ 0.21
COL27A1-208ENST00000494780 TMEM256Q8N2U0 113 aa16.35■□□□□ 0.21
COL27A1-208ENST00000494780 OR8A1Q8NGG7 326 aa16.35■□□□□ 0.21
COL27A1-208ENST00000494780 SMIM8Q96KF7 97 aa16.35■□□□□ 0.21
COL27A1-208ENST00000494780 DYNC1H1Q14204 4646 aaKnown RBP16.35■□□□□ 0.21
COL27A1-208ENST00000494780 AZU1P20160 251 aa16.34■□□□□ 0.21
COL27A1-208ENST00000494780 RHOBP62745 196 aa16.34■□□□□ 0.21
COL27A1-208ENST00000494780 DLK1P80370 383 aa16.34■□□□□ 0.21
COL27A1-208ENST00000494780 PSG3Q16557 428 aa16.34■□□□□ 0.21
COL27A1-208ENST00000494780 UHRF2Q96PU4 802 aa16.34■□□□□ 0.21
COL27A1-208ENST00000494780 LINC01587Q99440 93 aa16.34■□□□□ 0.21
COL27A1-208ENST00000494780 PPP1R14DQ9NXH3 145 aa16.34■□□□□ 0.21
COL27A1-208ENST00000494780 RNF24Q9Y225 148 aa16.34■□□□□ 0.21
COL27A1-208ENST00000494780 MUC4Q99102 2169 aa16.33■□□□□ 0.2
COL27A1-208ENST00000494780 FNDC10F2Z333 226 aa16.33■□□□□ 0.2
COL27A1-208ENST00000494780 F5H768 121 aa16.33■□□□□ 0.2
COL27A1-208ENST00000494780 SSSCA1O60232 199 aa16.33■□□□□ 0.2
COL27A1-208ENST00000494780 TAS2R60P59551 318 aa16.33■□□□□ 0.2
COL27A1-208ENST00000494780 LRRC20Q8TCA0 184 aa16.33■□□□□ 0.2
COL27A1-208ENST00000494780 NPVFQ9HCQ7 196 aa16.33■□□□□ 0.2
COL27A1-208ENST00000494780 NAP1L6A6NFF2 107 aa16.32■□□□□ 0.2
COL27A1-208ENST00000494780 CBY3A6NI87 242 aa16.32■□□□□ 0.2
COL27A1-208ENST00000494780 K7EPK0 472 aa16.32■□□□□ 0.2
COL27A1-208ENST00000494780 NDUFB6O95139 128 aa16.32■□□□□ 0.2
COL27A1-208ENST00000494780 ATP5G1P05496 136 aa16.32■□□□□ 0.2
COL27A1-208ENST00000494780 ATP5G3P48201 142 aa16.32■□□□□ 0.2
COL27A1-208ENST00000494780 RRAS2P62070 204 aaPredicted RBP16.32■□□□□ 0.2
COL27A1-208ENST00000494780 TMEM14EPQ6UXP3 125 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms