RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 DAZAP1Q96EP5 407 aaKnown RBP12.21□□□□□ -0.46
SDF4-207ENST00000494748 RIF1Q5UIP0 2472 aaKnown RBP12.21□□□□□ -0.46
SDF4-207ENST00000494748 HTR1DP28221 377 aa12.2□□□□□ -0.46
SDF4-207ENST00000494748 IGFL2Q6UWQ7 119 aa12.2□□□□□ -0.46
SDF4-207ENST00000494748 DHRS13Q6UX07 377 aa12.2□□□□□ -0.46
SDF4-207ENST00000494748 OR10X1Q8NGY0 326 aa12.2□□□□□ -0.46
SDF4-207ENST00000494748 OTORQ9NRC9 128 aa12.2□□□□□ -0.46
SDF4-207ENST00000494748 AP5S1Q9NUS5 200 aa12.2□□□□□ -0.46
SDF4-207ENST00000494748 ASCL2Q99929 193 aa12.2□□□□□ -0.46
SDF4-207ENST00000494748 MBD3L4A6NDZ8 208 aaPredicted RBP12.2□□□□□ -0.46
SDF4-207ENST00000494748 MBD3L3A6NE82 208 aaPredicted RBP12.2□□□□□ -0.46
SDF4-207ENST00000494748 MBD3L5A6NJ08 208 aaPredicted RBP12.2□□□□□ -0.46
SDF4-207ENST00000494748 CRIP1P50238 77 aa12.2□□□□□ -0.46
SDF4-207ENST00000494748 PAX8Q06710 450 aa12.2□□□□□ -0.46
SDF4-207ENST00000494748 C3orf36Q3SXR2 165 aa12.2□□□□□ -0.46
SDF4-207ENST00000494748 BPIFA4PQ86YQ2 179 aa12.2□□□□□ -0.46
SDF4-207ENST00000494748 MBD3L2Q8NHZ7 208 aaPredicted RBP12.2□□□□□ -0.46
SDF4-207ENST00000494748 RABAC1Q9UI14 185 aa12.2□□□□□ -0.46
SDF4-207ENST00000494748 IGHV3-21A0A0B4J1V1 117 aa12.19□□□□□ -0.46
SDF4-207ENST00000494748 A0A1B0GUT8 65 aa12.19□□□□□ -0.46
SDF4-207ENST00000494748 PAX2Q02962 417 aa12.19□□□□□ -0.46
SDF4-207ENST00000494748 MEF2CQ06413 473 aaPredicted RBP12.19□□□□□ -0.46
SDF4-207ENST00000494748 PRNTQ86SH4 94 aa12.19□□□□□ -0.46
SDF4-207ENST00000494748 ZADH2Q8N4Q0 377 aa12.19□□□□□ -0.46
SDF4-207ENST00000494748 MEGF9Q9H1U4 602 aa12.19□□□□□ -0.46
SDF4-207ENST00000494748 APOBEC3AP31941 199 aaPredicted RBP12.19□□□□□ -0.46
SDF4-207ENST00000494748 GOLT1AQ6ZVE7 132 aa12.19□□□□□ -0.46
SDF4-207ENST00000494748 LINC00311Q8N616 119 aa12.19□□□□□ -0.46
SDF4-207ENST00000494748 TMEM14CQ9P0S9 112 aa12.19□□□□□ -0.46
SDF4-207ENST00000494748 C9orf118A6NHY6 69 aa12.19□□□□□ -0.46
SDF4-207ENST00000494748 CDX4O14627 284 aaPredicted RBP12.19□□□□□ -0.46
SDF4-207ENST00000494748 BOD1L2Q8IYS8 172 aa12.19□□□□□ -0.46
SDF4-207ENST00000494748 FER1L6-AS1Q8NA97 138 aa12.19□□□□□ -0.46
SDF4-207ENST00000494748 K7ERU9 68 aa12.18□□□□□ -0.46
SDF4-207ENST00000494748 S100A7P31151 101 aa12.18□□□□□ -0.46
SDF4-207ENST00000494748 NKX2-8O15522 239 aa12.18□□□□□ -0.46
SDF4-207ENST00000494748 CRYGBP07316 175 aa12.18□□□□□ -0.46
SDF4-207ENST00000494748 RPRMLQ8N4K4 120 aa12.18□□□□□ -0.46
SDF4-207ENST00000494748 C8orf31Q8N9H6 132 aa12.18□□□□□ -0.46
SDF4-207ENST00000494748 H3BRM9 83 aa12.17□□□□□ -0.46
SDF4-207ENST00000494748 IFI27P40305 119 aaPredicted RBP12.17□□□□□ -0.46
SDF4-207ENST00000494748 DLX6P56179 175 aa12.17□□□□□ -0.46
SDF4-207ENST00000494748 ADAMTSL5Q6ZMM2 481 aa12.17□□□□□ -0.46
SDF4-207ENST00000494748 CCL11P51671 97 aa12.17□□□□□ -0.46
SDF4-207ENST00000494748 ZNF493Q6ZR52 646 aa12.17□□□□□ -0.46
SDF4-207ENST00000494748 OR10AG1Q8NH19 301 aa12.17□□□□□ -0.46
SDF4-207ENST00000494748 SRSF12Q8WXF0 261 aaKnown RBP12.17□□□□□ -0.46
SDF4-207ENST00000494748 U3KQK5 164 aa12.17□□□□□ -0.46
SDF4-207ENST00000494748 APELAP0DMC3 54 aa12.17□□□□□ -0.46
SDF4-207ENST00000494748 UQCRFS1P47985 274 aa12.17□□□□□ -0.46
SDF4-207ENST00000494748 TMEM186Q96B77 213 aa12.17□□□□□ -0.46
SDF4-207ENST00000494748 SLC25A39Q9BZJ4 359 aaPredicted RBP12.17□□□□□ -0.46
SDF4-207ENST00000494748 SELENOKQ9Y6D0 94 aa12.17□□□□□ -0.46
SDF4-207ENST00000494748 G3V4G9 280 aa12.16□□□□□ -0.46
SDF4-207ENST00000494748 CNTFRP26992 372 aa12.16□□□□□ -0.46
SDF4-207ENST00000494748 C17orf77Q96MU5 243 aa12.16□□□□□ -0.46
SDF4-207ENST00000494748 LAMA5O15230 3695 aa12.16□□□□□ -0.46
SDF4-207ENST00000494748 GAGE10A6NGK3 116 aa12.16□□□□□ -0.46
SDF4-207ENST00000494748 TNFRSF13BO14836 293 aaPredicted RBP12.16□□□□□ -0.46
SDF4-207ENST00000494748 PRB4P10163 310 aaPredicted RBP12.16□□□□□ -0.46
SDF4-207ENST00000494748 NEGR1Q7Z3B1 354 aa12.16□□□□□ -0.46
SDF4-207ENST00000494748 MALRD1Q5VYJ5 2156 aa12.16□□□□□ -0.46
SDF4-207ENST00000494748 K7EP34 96 aa12.16□□□□□ -0.46
SDF4-207ENST00000494748 TMEM75Q8N9X5 138 aa12.16□□□□□ -0.46
SDF4-207ENST00000494748 SIGLEC8Q9NYZ4 499 aa12.16□□□□□ -0.46
SDF4-207ENST00000494748 HIGD1AQ9Y241 93 aa12.16□□□□□ -0.46
SDF4-207ENST00000494748 RIPPLY3P57055 190 aa12.15□□□□□ -0.46
SDF4-207ENST00000494748 TEX22C9J3V5 150 aa12.15□□□□□ -0.46
SDF4-207ENST00000494748 TNFRSF1AP19438 455 aa12.15□□□□□ -0.46
SDF4-207ENST00000494748 RIGQ13278 110 aa12.15□□□□□ -0.46
SDF4-207ENST00000494748 LGALS9BQ3B8N2 356 aa12.15□□□□□ -0.46
SDF4-207ENST00000494748 VMA21Q3ZAQ7 101 aa12.15□□□□□ -0.46
SDF4-207ENST00000494748 LGALS9CQ6DKI2 356 aa12.15□□□□□ -0.46
SDF4-207ENST00000494748 ABHD17AQ96GS6 310 aa12.15□□□□□ -0.46
SDF4-207ENST00000494748 FAM215AQ9Y5M1 114 aa12.15□□□□□ -0.46
SDF4-207ENST00000494748 M0R296 226 aa12.15□□□□□ -0.47
SDF4-207ENST00000494748 CCL8P80075 99 aa12.15□□□□□ -0.47
SDF4-207ENST00000494748 OR1N2Q8NGR9 330 aa12.15□□□□□ -0.47
SDF4-207ENST00000494748 NAA38Q9BRA0 125 aaKnown RBP12.15□□□□□ -0.47
SDF4-207ENST00000494748 INSIG2Q9Y5U4 225 aa12.15□□□□□ -0.47
SDF4-207ENST00000494748 TMEM238C9JI98 176 aa12.14□□□□□ -0.47
SDF4-207ENST00000494748 CSN1S1P47710 185 aa12.14□□□□□ -0.47
SDF4-207ENST00000494748 LYPD2Q6UXB3 125 aa12.14□□□□□ -0.47
SDF4-207ENST00000494748 KIR3DS1Q14943 382 aa12.14□□□□□ -0.47
SDF4-207ENST00000494748 SIGLEC15Q6ZMC9 328 aa12.14□□□□□ -0.47
SDF4-207ENST00000494748 FA2HQ7L5A8 372 aa12.14□□□□□ -0.47
SDF4-207ENST00000494748 TRBV19A0A075B6N1 114 aa12.14□□□□□ -0.47
SDF4-207ENST00000494748 IGHV3-72A0A0B4J1Y9 119 aa12.14□□□□□ -0.47
SDF4-207ENST00000494748 PRSS3P2Q8NHM4 247 aa12.14□□□□□ -0.47
SDF4-207ENST00000494748 BSNQ9UPA5 3926 aa12.13□□□□□ -0.47
SDF4-207ENST00000494748 H3BUT2 72 aa12.13□□□□□ -0.47
SDF4-207ENST00000494748 SMAD7O15105 426 aaKnown RBP12.13□□□□□ -0.47
SDF4-207ENST00000494748 MRPS12O15235 138 aaKnown RBP12.13□□□□□ -0.47
SDF4-207ENST00000494748 LYZP61626 148 aa12.13□□□□□ -0.47
SDF4-207ENST00000494748 OR8A1Q8NGG7 326 aa12.13□□□□□ -0.47
SDF4-207ENST00000494748 HILPDAQ9Y5L2 63 aa12.13□□□□□ -0.47
SDF4-207ENST00000494748 F11RQ9Y624 299 aaKnown RBP12.13□□□□□ -0.47
SDF4-207ENST00000494748 A0A1B0GW15 77 aa12.13□□□□□ -0.47
SDF4-207ENST00000494748 D6R8Y8 96 aa12.13□□□□□ -0.47
SDF4-207ENST00000494748 CTSZQ9UBR2 303 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms