RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 ACOT7LQ6ZUV0 252 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 BPIFCQ8NFQ6 507 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 C16orf92Q96LL3 132 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 C20orf173Q96LM9 149 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 C17orf77Q96MU5 243 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 SLC35B3Q9H1N7 401 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 SLC25A32Q9H2D1 315 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 HRH4Q9H3N8 390 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 PLA2G2EQ9NZK7 142 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 GSKIPQ9P0R6 139 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 DOK5Q9P104 306 aa6.91□□□□□ -1.3
MSH5-218ENST00000494646 DNAH11Q96DT5 4516 aa6.9□□□□□ -1.3
MSH5-218ENST00000494646 PMS2P5A8MQ11 134 aa6.9□□□□□ -1.3
MSH5-218ENST00000494646 CFDP00746 253 aaPredicted RBP6.9□□□□□ -1.3
MSH5-218ENST00000494646 IL5P05113 134 aa6.9□□□□□ -1.3
MSH5-218ENST00000494646 ZNF705DP0CH99 300 aaPredicted RBP6.9□□□□□ -1.3
MSH5-218ENST00000494646 ZNF705BP0CI00 300 aaPredicted RBP6.9□□□□□ -1.3
MSH5-218ENST00000494646 IL7P13232 177 aa6.9□□□□□ -1.3
MSH5-218ENST00000494646 PSMB3P49720 205 aa6.9□□□□□ -1.3
MSH5-218ENST00000494646 PAX9P55771 341 aa6.9□□□□□ -1.3
MSH5-218ENST00000494646 FAM78BQ5VT40 261 aa6.9□□□□□ -1.3
MSH5-218ENST00000494646 FOXI2Q6ZQN5 318 aa6.9□□□□□ -1.3
MSH5-218ENST00000494646 OR4D5Q8NGN0 318 aa6.9□□□□□ -1.3
MSH5-218ENST00000494646 SMIM8Q96KF7 97 aa6.9□□□□□ -1.3
MSH5-218ENST00000494646 TMEM147Q9BVK8 224 aa6.9□□□□□ -1.3
MSH5-218ENST00000494646 SCRT1Q9BWW7 348 aa6.9□□□□□ -1.3
MSH5-218ENST00000494646 IGHV4-4A0A075B6R2 117 aa6.89□□□□□ -1.31
MSH5-218ENST00000494646 DEFB131BA0A096LNP1 70 aa6.89□□□□□ -1.31
MSH5-218ENST00000494646 ISLRO14498 428 aa6.89□□□□□ -1.31
MSH5-218ENST00000494646 METTL15P1P0C7V9 234 aa6.89□□□□□ -1.31
MSH5-218ENST00000494646 PRB4P10163 310 aaPredicted RBP6.89□□□□□ -1.31
MSH5-218ENST00000494646 BTCP35070 178 aa6.89□□□□□ -1.31
MSH5-218ENST00000494646 GALR1P47211 349 aa6.89□□□□□ -1.31
MSH5-218ENST00000494646 TCTAP57738 103 aa6.89□□□□□ -1.31
MSH5-218ENST00000494646 PSG9Q00887 426 aa6.89□□□□□ -1.31
MSH5-218ENST00000494646 IAH1Q2TAA2 248 aaPredicted RBP6.89□□□□□ -1.31
MSH5-218ENST00000494646 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.89□□□□□ -1.31
MSH5-218ENST00000494646 CYP2G1PQ6ZSU1 146 aa6.89□□□□□ -1.31
MSH5-218ENST00000494646 TMEM144Q7Z5S9 345 aa6.89□□□□□ -1.31
MSH5-218ENST00000494646 ZNF709Q8N972 641 aa6.89□□□□□ -1.31
MSH5-218ENST00000494646 RPRMQ9NS64 109 aa6.89□□□□□ -1.31
MSH5-218ENST00000494646 TRAV6A0A075B6T7 132 aa6.88□□□□□ -1.31
MSH5-218ENST00000494646 A0A0J9YX75 114 aa6.88□□□□□ -1.31
MSH5-218ENST00000494646 ZNF561-AS1K7EIQ3 104 aa6.88□□□□□ -1.31
MSH5-218ENST00000494646 PLA2G10O15496 165 aa6.88□□□□□ -1.31
MSH5-218ENST00000494646 PRM2P04554 102 aa6.88□□□□□ -1.31
MSH5-218ENST00000494646 OR5G3P0C626 314 aa6.88□□□□□ -1.31
MSH5-218ENST00000494646 TMEM14EPQ6UXP3 125 aa6.88□□□□□ -1.31
MSH5-218ENST00000494646 ZNF705AQ6ZN79 300 aaPredicted RBP6.88□□□□□ -1.31
MSH5-218ENST00000494646 C1orf158Q8N1D5 194 aa6.88□□□□□ -1.31
MSH5-218ENST00000494646 RNF182Q8N6D2 247 aa6.88□□□□□ -1.31
MSH5-218ENST00000494646 ZBTB8BQ8NAP8 495 aaPredicted RBP6.88□□□□□ -1.31
MSH5-218ENST00000494646 C7orf50Q9BRJ6 194 aaKnown RBP6.88□□□□□ -1.31
MSH5-218ENST00000494646 SLC25A39Q9BZJ4 359 aaPredicted RBP6.88□□□□□ -1.31
MSH5-218ENST00000494646 ARL6Q9H0F7 186 aa6.88□□□□□ -1.31
MSH5-218ENST00000494646 NPVFQ9HCQ7 196 aa6.88□□□□□ -1.31
MSH5-218ENST00000494646 SLC45A2Q9UMX9 530 aa6.88□□□□□ -1.31
MSH5-218ENST00000494646 HERC2O95714 4834 aa6.88□□□□□ -1.31
MSH5-218ENST00000494646 TRAV8-2A0A0B4J237 113 aa6.87□□□□□ -1.31
MSH5-218ENST00000494646 ZNF705FA8MVS1 300 aaPredicted RBP6.87□□□□□ -1.31
MSH5-218ENST00000494646 FAM25EA8MYX2 175 aa6.87□□□□□ -1.31
MSH5-218ENST00000494646 CCSO14618 274 aa6.87□□□□□ -1.31
MSH5-218ENST00000494646 HYPMO75409 117 aa6.87□□□□□ -1.31
MSH5-218ENST00000494646 SNRPCP09234 159 aaKnown RBP6.87□□□□□ -1.31
MSH5-218ENST00000494646 SPART-AS1P0CW21 52 aa6.87□□□□□ -1.31
MSH5-218ENST00000494646 MEOX2P50222 304 aa6.87□□□□□ -1.31
MSH5-218ENST00000494646 RAP2BP61225 183 aa6.87□□□□□ -1.31
MSH5-218ENST00000494646 ARL16Q0P5N6 197 aa6.87□□□□□ -1.31
MSH5-218ENST00000494646 SPATA31B1PQ5VZV4 182 aa6.87□□□□□ -1.31
MSH5-218ENST00000494646 PATE2Q6UY27 113 aa6.87□□□□□ -1.31
MSH5-218ENST00000494646 OR10P1Q8NGE3 313 aa6.87□□□□□ -1.31
MSH5-218ENST00000494646 MITD1Q8WV92 249 aa6.87□□□□□ -1.31
MSH5-218ENST00000494646 UHRF2Q96PU4 802 aa6.87□□□□□ -1.31
MSH5-218ENST00000494646 NEU1Q99519 415 aa6.87□□□□□ -1.31
MSH5-218ENST00000494646 HIGD1AQ9Y241 93 aa6.87□□□□□ -1.31
MSH5-218ENST00000494646 RCL1Q9Y2P8 373 aaKnown RBP6.87□□□□□ -1.31
MSH5-218ENST00000494646 C7orf66A4D0T2 115 aa6.86□□□□□ -1.31
MSH5-218ENST00000494646 SMIM9A6NGZ8 99 aa6.86□□□□□ -1.31
MSH5-218ENST00000494646 H3BRN7 92 aa6.86□□□□□ -1.31
MSH5-218ENST00000494646 LYRM1O43325 122 aa6.86□□□□□ -1.31
MSH5-218ENST00000494646 MBPP02686 304 aaPredicted RBP6.86□□□□□ -1.31
MSH5-218ENST00000494646 LINC00869P0C866 280 aa6.86□□□□□ -1.31
MSH5-218ENST00000494646 S100A7P31151 101 aa6.86□□□□□ -1.31
MSH5-218ENST00000494646 CNN1P51911 297 aaKnown RBP6.86□□□□□ -1.31
MSH5-218ENST00000494646 VAMP2P63027 116 aa6.86□□□□□ -1.31
MSH5-218ENST00000494646 DLK1P80370 383 aa6.86□□□□□ -1.31
MSH5-218ENST00000494646 SLC38A11Q08AI6 406 aa6.86□□□□□ -1.31
MSH5-218ENST00000494646 FAM222AQ5U5X8 452 aa6.86□□□□□ -1.31
MSH5-218ENST00000494646 LRRC20Q8TCA0 184 aa6.86□□□□□ -1.31
MSH5-218ENST00000494646 GPR82Q96P67 336 aa6.86□□□□□ -1.31
MSH5-218ENST00000494646 SHANK2-AS3Q9BTD1 123 aa6.86□□□□□ -1.31
MSH5-218ENST00000494646 TMEM208Q9BTX3 173 aa6.86□□□□□ -1.31
MSH5-218ENST00000494646 RNF126Q9BV68 326 aa6.86□□□□□ -1.31
MSH5-218ENST00000494646 C20orf85Q9H1P6 137 aa6.86□□□□□ -1.31
MSH5-218ENST00000494646 MGAT4CQ9UBM8 478 aa6.86□□□□□ -1.31
MSH5-218ENST00000494646 GOLT1BQ9Y3E0 138 aa6.86□□□□□ -1.31
MSH5-218ENST00000494646 LSM5Q9Y4Y9 91 aaKnown RBP6.86□□□□□ -1.31
MSH5-218ENST00000494646 RFNGQ9Y644 331 aa6.86□□□□□ -1.31
MSH5-218ENST00000494646 M0R2Z0 102 aa6.85□□□□□ -1.31
MSH5-218ENST00000494646 GOSR2O14653 212 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms