RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 FAM90A26D6RGX4 464 aa5.88□□□□□ -1.47
RIF1-211ENST00000494333 SYNGR2O43760 224 aa5.88□□□□□ -1.47
RIF1-211ENST00000494333 MED6O75586 246 aa5.88□□□□□ -1.47
RIF1-211ENST00000494333 RPP30P78346 268 aaKnown RBP5.88□□□□□ -1.47
RIF1-211ENST00000494333 PSMG4Q5JS54 123 aa5.88□□□□□ -1.47
RIF1-211ENST00000494333 ACTL10Q5JWF8 245 aa5.88□□□□□ -1.47
RIF1-211ENST00000494333 GGNBP1Q5YKI7 109 aa5.88□□□□□ -1.47
RIF1-211ENST00000494333 TRIQKQ629K1 86 aa5.88□□□□□ -1.47
RIF1-211ENST00000494333 CEMP1Q6PRD7 247 aaPredicted RBP5.88□□□□□ -1.47
RIF1-211ENST00000494333 SIGLEC15Q6ZMC9 328 aa5.88□□□□□ -1.47
RIF1-211ENST00000494333 TRPT1Q86TN4 253 aaKnown RBP5.88□□□□□ -1.47
RIF1-211ENST00000494333 RNF125Q96EQ8 232 aa5.88□□□□□ -1.47
RIF1-211ENST00000494333 RAB40CQ96S21 281 aa5.88□□□□□ -1.47
RIF1-211ENST00000494333 DEFB4AO15263 64 aa5.87□□□□□ -1.47
RIF1-211ENST00000494333 ADAP1O75689 374 aa5.87□□□□□ -1.47
RIF1-211ENST00000494333 NDUFB6O95139 128 aa5.87□□□□□ -1.47
RIF1-211ENST00000494333 UBE2MP61081 183 aaKnown RBP5.87□□□□□ -1.47
RIF1-211ENST00000494333 LYZP61626 148 aa5.87□□□□□ -1.47
RIF1-211ENST00000494333 SNRPD3P62318 126 aaKnown RBP5.87□□□□□ -1.47
RIF1-211ENST00000494333 OR2F1Q13607 317 aa5.87□□□□□ -1.47
RIF1-211ENST00000494333 SPANXN5Q5MJ07 72 aa5.87□□□□□ -1.47
RIF1-211ENST00000494333 MORN3Q6PF18 240 aaPredicted RBP5.87□□□□□ -1.47
RIF1-211ENST00000494333 C11orf45Q8TAV5 145 aa5.87□□□□□ -1.47
RIF1-211ENST00000494333 PHLDA1Q8WV24 401 aaPredicted RBP5.87□□□□□ -1.47
RIF1-211ENST00000494333 CIB3Q96Q77 187 aaPredicted RBP5.87□□□□□ -1.47
RIF1-211ENST00000494333 SDHCQ99643 169 aaPredicted RBP5.87□□□□□ -1.47
RIF1-211ENST00000494333 NRN1Q9NPD7 142 aa5.87□□□□□ -1.47
RIF1-211ENST00000494333 FLVCR2Q9UPI3 526 aa5.87□□□□□ -1.47
RIF1-211ENST00000494333 KLK5Q9Y337 293 aaPredicted RBP5.87□□□□□ -1.47
RIF1-211ENST00000494333 IGKV1OR2-108A0A075B7D4 117 aa5.86□□□□□ -1.47
RIF1-211ENST00000494333 CENPXA8MT69 81 aa5.86□□□□□ -1.47
RIF1-211ENST00000494333 H3BP45 60 aa5.86□□□□□ -1.47
RIF1-211ENST00000494333 LY6G6CO95867 125 aa5.86□□□□□ -1.47
RIF1-211ENST00000494333 IFNA21P01568 189 aa5.86□□□□□ -1.47
RIF1-211ENST00000494333 FABP1P07148 127 aa5.86□□□□□ -1.47
RIF1-211ENST00000494333 GIG44P09565 113 aaPredicted RBP5.86□□□□□ -1.47
RIF1-211ENST00000494333 OR4E1P0C645 316 aa5.86□□□□□ -1.47
RIF1-211ENST00000494333 SPP1P10451 314 aa5.86□□□□□ -1.47
RIF1-211ENST00000494333 NANOS2P60321 138 aaKnown RBP5.86□□□□□ -1.47
RIF1-211ENST00000494333 POLR2GP62487 172 aaKnown RBP eCLIP5.86□□□□□ -1.47
RIF1-211ENST00000494333 TMEM41BQ5BJD5 291 aa5.86□□□□□ -1.47
RIF1-211ENST00000494333 OR8G2PQ6IF36 304 aa5.86□□□□□ -1.47
RIF1-211ENST00000494333 COQ8AQ8NI60 647 aa5.86□□□□□ -1.47
RIF1-211ENST00000494333 PPP1R14BQ96C90 147 aa5.86□□□□□ -1.47
RIF1-211ENST00000494333 TRGV9Q99603 122 aa5.86□□□□□ -1.47
RIF1-211ENST00000494333 PRSS46E5RG02 174 aa5.85□□□□□ -1.47
RIF1-211ENST00000494333 IL7P13232 177 aa5.85□□□□□ -1.47
RIF1-211ENST00000494333 ANXA7P20073 488 aaKnown RBP5.85□□□□□ -1.47
RIF1-211ENST00000494333 C4BPBP20851 252 aa5.85□□□□□ -1.47
RIF1-211ENST00000494333 NUP62P37198 522 aaPredicted RBP5.85□□□□□ -1.47
RIF1-211ENST00000494333 NKX2-1P43699 371 aaPredicted RBP5.85□□□□□ -1.47
RIF1-211ENST00000494333 NUTF2P61970 127 aaKnown RBP5.85□□□□□ -1.47
RIF1-211ENST00000494333 GSG1LQ6UXU4 331 aa5.85□□□□□ -1.47
RIF1-211ENST00000494333 OR8I2Q8N0Y5 310 aa5.85□□□□□ -1.47
RIF1-211ENST00000494333 THAP8Q8NA92 274 aa5.85□□□□□ -1.47
RIF1-211ENST00000494333 URB1-AS1Q96HZ7 61 aa5.85□□□□□ -1.47
RIF1-211ENST00000494333 LINC00052Q96N35 136 aa5.85□□□□□ -1.47
RIF1-211ENST00000494333 C7orf50Q9BRJ6 194 aaKnown RBP5.85□□□□□ -1.47
RIF1-211ENST00000494333 MFFQ9GZY8 342 aa5.85□□□□□ -1.47
RIF1-211ENST00000494333 C11orf68Q9H3H3 251 aaKnown RBP5.85□□□□□ -1.47
RIF1-211ENST00000494333 CLEC5AQ9NY25 188 aa5.85□□□□□ -1.47
RIF1-211ENST00000494333 PSENENQ9NZ42 101 aa5.85□□□□□ -1.47
RIF1-211ENST00000494333 NDUFA13Q9P0J0 144 aa5.85□□□□□ -1.47
RIF1-211ENST00000494333 FBXL17Q9UF56 701 aa5.85□□□□□ -1.47
RIF1-211ENST00000494333 STRAPQ9Y3F4 350 aaKnown RBP5.85□□□□□ -1.47
RIF1-211ENST00000494333 IGHV4-28A0A0C4DH34 117 aa5.84□□□□□ -1.47
RIF1-211ENST00000494333 H3BMM0 161 aa5.84□□□□□ -1.47
RIF1-211ENST00000494333 CFDP00746 253 aaPredicted RBP5.84□□□□□ -1.47
RIF1-211ENST00000494333 IGKV3-20P01619 116 aa5.84□□□□□ -1.47
RIF1-211ENST00000494333 RBMY1A1P0DJD3 496 aaKnown RBP5.84□□□□□ -1.47
RIF1-211ENST00000494333 RBMY1CP0DJD4 496 aa5.84□□□□□ -1.47
RIF1-211ENST00000494333 ORM2P19652 201 aa5.84□□□□□ -1.47
RIF1-211ENST00000494333 GATA2P23769 480 aaPredicted RBP5.84□□□□□ -1.47
RIF1-211ENST00000494333 BTCP35070 178 aa5.84□□□□□ -1.47
RIF1-211ENST00000494333 ID1P41134 155 aa5.84□□□□□ -1.47
RIF1-211ENST00000494333 AKR1C1Q04828 323 aa5.84□□□□□ -1.47
RIF1-211ENST00000494333 RBMY1FQ15415 496 aaKnown RBP5.84□□□□□ -1.47
RIF1-211ENST00000494333 C1orf194Q5T5A4 169 aa5.84□□□□□ -1.47
RIF1-211ENST00000494333 TMEM182Q6ZP80 229 aaPredicted RBP5.84□□□□□ -1.47
RIF1-211ENST00000494333 Q8NAQ8 132 aa5.84□□□□□ -1.47
RIF1-211ENST00000494333 CSNK1G2-AS1Q8NCQ2 148 aa5.84□□□□□ -1.47
RIF1-211ENST00000494333 OR4D5Q8NGN0 318 aa5.84□□□□□ -1.47
RIF1-211ENST00000494333 C1QTNF4Q9BXJ3 329 aa5.84□□□□□ -1.47
RIF1-211ENST00000494333 GSKIPQ9P0R6 139 aa5.84□□□□□ -1.47
RIF1-211ENST00000494333 TBC1D24Q9ULP9 559 aa5.84□□□□□ -1.47
RIF1-211ENST00000494333 SMCO3A2RU48 225 aa5.83□□□□□ -1.48
RIF1-211ENST00000494333 ZNF705EA8MWA4 302 aaPredicted RBP5.83□□□□□ -1.48
RIF1-211ENST00000494333 PLA2G10O15496 165 aa5.83□□□□□ -1.48
RIF1-211ENST00000494333 SSSCA1O60232 199 aa5.83□□□□□ -1.48
RIF1-211ENST00000494333 MIFP14174 115 aa5.83□□□□□ -1.48
RIF1-211ENST00000494333 DEFB1P60022 68 aa5.83□□□□□ -1.48
RIF1-211ENST00000494333 IAH1Q2TAA2 248 aaPredicted RBP5.83□□□□□ -1.48
RIF1-211ENST00000494333 CNPY1Q3B7I2 92 aa5.83□□□□□ -1.48
RIF1-211ENST00000494333 GDF5OSQ5U4N7 250 aa5.83□□□□□ -1.48
RIF1-211ENST00000494333 C9orf47Q6ZRZ4 202 aa5.83□□□□□ -1.48
RIF1-211ENST00000494333 ACOT7LQ6ZUV0 252 aa5.83□□□□□ -1.48
RIF1-211ENST00000494333 TMEM144Q7Z5S9 345 aa5.83□□□□□ -1.48
RIF1-211ENST00000494333 BPIFCQ8NFQ6 507 aa5.83□□□□□ -1.48
RIF1-211ENST00000494333 OR1B1Q8NGR6 318 aa5.83□□□□□ -1.48
RIF1-211ENST00000494333 SMIM8Q96KF7 97 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms