RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 HIST1H2BKO60814 126 aa5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 HIST1H2BJP06899 126 aa5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 SFTA3P0C7M3 94 aa5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 SCGB1A1P11684 91 aa5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 HIST1H2BOP23527 126 aa5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 HIST1H2BBP33778 126 aa5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 HIST1H2BDP58876 126 aa5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 HIST1H2BCP62807 126 aa5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 HIST2H2BEQ16778 126 aa5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 SPINK9Q5DT21 86 aa5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 COL5A1-AS1Q5SY13 56 aa5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 ORAOV1Q8WV07 137 aa5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 HIST1H2BHQ93079 126 aa5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 RPUSD4Q96CM3 377 aaKnown RBP5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 HIST1H2BNQ99877 126 aa5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 HIST1H2BMQ99879 126 aa5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 NPCDR1Q9BY65 106 aa5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 FNDC4Q9H6D8 234 aaPredicted RBP5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 FAM96BQ9Y3D0 163 aa5.31□□□□□ -1.56
FNDC3B-212ENST00000494000 UBR5O95071 2799 aaPredicted RBP5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 A0A1W2PRE2 83 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 FAM231BA6NCW3 169 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 USP17L23D6RBM5 183 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 HLA-DRB1P01911 266 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 OR13C7P0DN81 318 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 VPREB1P12018 145 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 TFPI2P48307 235 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 ZNF343Q6P1L6 599 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 ZNF705AQ6ZN79 300 aaPredicted RBP5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 LINC01551Q86U37 167 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 OR8I2Q8N0Y5 310 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 MBD3L1Q8WWY6 194 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 SRSF12Q8WXF0 261 aaKnown RBP5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 GRAMD2BQ96HH9 432 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 RASL11BQ9BPW5 248 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 FBXL15Q9H469 300 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 GCGP01275 180 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 DLX1P56177 255 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 MRGPRG-AS1Q2M3A8 158 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 TREML4Q6UXN2 200 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 OR1N2Q8NGR9 330 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 FAM213BQ8TBF2 198 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 SH3BGRL3Q9H299 93 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 F11RQ9Y624 299 aaKnown RBP5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 CFAP46Q8IYW2 2715 aa5.3□□□□□ -1.56
FNDC3B-212ENST00000494000 CTXND1A0A1B0GTU2 59 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 IGLC7A0M8Q6 106 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 AGPAT2O15120 278 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 IFNA1P01562 189 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 WT1-ASQ06250 92 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 FXYD3Q14802 87 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 AWAT1Q58HT5 328 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 C1orf194Q5T5A4 169 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 RITA1Q96K30 269 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 RNASE7Q9H1E1 156 aaKnown RBP5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 KMT2BQ9UMN6 2715 aaPredicted RBP5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 A0A087WX48 190 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 A0A1W2PRD5 423 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 A0A1W2PRF3 423 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 A0A1W2PRM7 423 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 NCBP2LA6PVI3 153 aaKnown RBP5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 GHRHP01286 108 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 IGF1P05019 195 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 TMEM170AQ8WVE7 144 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 RASL10AQ92737 203 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 AJUBAQ96IF1 538 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 YPEL4Q96NS1 127 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 FOXC2Q99958 501 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 GTSF1LQ9H1H1 148 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 SLC39A9Q9NUM3 307 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 MOB4Q9Y3A3 225 aa5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 TET2Q6N021 2002 aaPredicted RBP5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 HRNRQ86YZ3 2850 aaPredicted RBP5.29□□□□□ -1.56
FNDC3B-212ENST00000494000 TRAV40A0A0B4J280 105 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 CNTFRP26992 372 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 COL8A1P27658 744 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 GNB1P62873 340 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 BATFQ16520 125 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 KLK9Q2XQG4 91 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 TTC9CQ8N5M4 171 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 THAP8Q8NA92 274 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 ARPC1AQ92747 370 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 TPSG1Q9NRR2 321 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 AURKAIP1Q9NWT8 199 aaPredicted RBP5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 KLK9Q9UKQ9 250 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 TRAV30A0A087WSZ9 112 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 RHODO00212 210 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 TOMM40O96008 361 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 MYOD1P15172 320 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 DYNAPQ8N1N2 210 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 Q8N9W7 124 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 OR10G4Q8NGN3 311 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 OR10G7Q8NGN6 311 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 TMEM190Q8WZ59 177 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 TXNDC17Q9BRA2 123 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 GGTLC1Q9BX51 225 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 RPRMQ9NS64 109 aa5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 TECRQ9NZ01 308 aaKnown RBP5.28□□□□□ -1.56
FNDC3B-212ENST00000494000 PLA2G2EQ9NZK7 142 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms