RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 MIR17HGQ75NE6 70 aa8.45□□□□□ -1.06
PDLIM1-205ENST00000493949 BCL6BQ8N143 479 aaPredicted RBP8.45□□□□□ -1.06
PDLIM1-205ENST00000493949 VSTM2AQ8TAG5 236 aa8.45□□□□□ -1.06
PDLIM1-205ENST00000493949 C18orf32Q8TCD1 76 aa8.45□□□□□ -1.06
PDLIM1-205ENST00000493949 LRRC29Q8WV35 223 aa8.45□□□□□ -1.06
PDLIM1-205ENST00000493949 SSMEM1Q8WWF3 244 aa8.45□□□□□ -1.06
PDLIM1-205ENST00000493949 PMCHL2Q9BQD1 86 aa8.45□□□□□ -1.06
PDLIM1-205ENST00000493949 SLC25A33Q9BSK2 321 aa8.45□□□□□ -1.06
PDLIM1-205ENST00000493949 IDI2-AS1Q9NZ38 188 aa8.45□□□□□ -1.06
PDLIM1-205ENST00000493949 ZNF492Q9P255 531 aa8.45□□□□□ -1.06
PDLIM1-205ENST00000493949 AMMECR1Q9Y4X0 333 aaPredicted RBP8.45□□□□□ -1.06
PDLIM1-205ENST00000493949 OR51B2Q9Y5P1 312 aa8.45□□□□□ -1.06
PDLIM1-205ENST00000493949 COX11Q9Y6N1 276 aa8.45□□□□□ -1.06
PDLIM1-205ENST00000493949 DYNC2H1Q8NCM8 4307 aaKnown RBP8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 KBTBD11-OT1A0A1B0GTJ5 212 aa8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 CLPSL1A2RUU4 121 aa8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 NKX6-3A6NJ46 265 aa8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 GGTLC3B5MD39 225 aa8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 G3V4G9 280 aa8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 H0YJW9 148 aa8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 OR7C2O60412 319 aa8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 DEFA4P12838 97 aa8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 CRYBB3P26998 211 aa8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 CEBPDP49716 269 aaPredicted RBP8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 SUB1P53999 127 aaKnown RBP eCLIP8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 UBE2G1P62253 170 aa8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 PAX2Q02962 417 aa8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 Q6ZR03 302 aa8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 C9orf139Q6ZV77 190 aa8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 ABHD12Q8N2K0 398 aa8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 CD177Q8N6Q3 437 aa8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 NHLRC2Q8NBF2 726 aa8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 DEFB108BQ8NET1 73 aa8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 MRAPQ8TCY5 172 aa8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 PGPEP1Q9NXJ5 209 aa8.44□□□□□ -1.06
PDLIM1-205ENST00000493949 TRAV30A0A087WSZ9 112 aa8.43□□□□□ -1.06
PDLIM1-205ENST00000493949 TNFSF4P23510 183 aa8.43□□□□□ -1.06
PDLIM1-205ENST00000493949 CDKN1BP46527 198 aa8.43□□□□□ -1.06
PDLIM1-205ENST00000493949 PTTG1IPP53801 180 aa8.43□□□□□ -1.06
PDLIM1-205ENST00000493949 ERHP84090 104 aaKnown RBP8.43□□□□□ -1.06
PDLIM1-205ENST00000493949 LRRC10Q5BKY1 277 aa8.43□□□□□ -1.06
PDLIM1-205ENST00000493949 SPINK9Q5DT21 86 aa8.43□□□□□ -1.06
PDLIM1-205ENST00000493949 C8orf31Q8N9H6 132 aa8.43□□□□□ -1.06
PDLIM1-205ENST00000493949 DPF1Q92782 380 aa8.43□□□□□ -1.06
PDLIM1-205ENST00000493949 MS4A6AQ9H2W1 248 aa8.43□□□□□ -1.06
PDLIM1-205ENST00000493949 DUSP13Q9UII6 198 aa8.43□□□□□ -1.06
PDLIM1-205ENST00000493949 RYR2Q92736 4967 aa8.43□□□□□ -1.06
PDLIM1-205ENST00000493949 IGKV1D-17A0A075B6S4 117 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 IGHV3-43A0A0B4J1X8 118 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 IGHV2-70DA0A0C4DH43 119 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 TRBV6-1A0A0K0K1D8 114 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 A0A1B0GW15 77 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 A0A1B0GXF2 115 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 IGLC7A0M8Q6 106 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 PSMB11A5LHX3 300 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 PEX7O00628 323 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 TOX4O94842 621 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 LHBP01229 141 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 IGHV3-13P01766 116 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 APOA2P02652 100 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 PRB2P02812 416 aaPredicted RBP8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 IGHV3-43DP0DP04 118 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 UBE2L3P68036 154 aaKnown RBP8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 TDRG1Q3Y452 100 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 PSMG4Q5JS54 123 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 SPATA31B1PQ5VZV4 182 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 RUSC1-AS1Q66K80 236 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 ETFRF1Q6IPR1 90 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 THAP8Q8NA92 274 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 OR2Z1Q8NG97 314 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 FAM110DQ8TAY7 271 aaPredicted RBP8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 ZNF596Q8TC21 504 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 ALKBH7Q9BT30 221 aaPredicted RBP8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 TMEM70Q9BUB7 260 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 TMEM191AQ9H0A3 160 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 ZNF430Q9H8G1 570 aaPredicted RBP8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 KLF12Q9Y4X4 402 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 DNAH9Q9NYC9 4486 aa8.42□□□□□ -1.06
PDLIM1-205ENST00000493949 A8MWL6 223 aa8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 M0R2Z0 102 aa8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 PPBPP02775 128 aa8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 SAA2P0DJI9 122 aaPredicted RBP8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 RNASE2P10153 161 aaKnown RBP8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 PCP4P48539 62 aa8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 RPS16P62249 146 aaKnown RBP8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 HBBP68871 147 aa8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 RHOGP84095 191 aa8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 MEF2CQ06413 473 aaPredicted RBP8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 COTL1Q14019 142 aa8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 EDDM3AQ14507 147 aa8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 MMDQ15546 238 aa8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 BATFQ16520 125 aa8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 ZNF826PQ6ZT77 177 aa8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 SLC25A48Q6ZT89 311 aaKnown RBP8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 OR10X1Q8NGY0 326 aa8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 RFESDQ8TAC1 157 aa8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 ZNF503Q96F45 646 aa8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 FMC1Q96HJ9 113 aa8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 FAM167A-AS1Q96KT0 104 aa8.41□□□□□ -1.06
PDLIM1-205ENST00000493949 FAM103A1Q9BTL3 118 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms