RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 CD28P10747 220 aa6.49□□□□□ -1.37
HDAC6-234ENST00000493923 BCL3P20749 454 aa6.49□□□□□ -1.37
HDAC6-234ENST00000493923 KIR2DS4P43632 304 aa6.49□□□□□ -1.37
HDAC6-234ENST00000493923 GNG4P50150 75 aa6.49□□□□□ -1.37
HDAC6-234ENST00000493923 RAB9AP51151 201 aa6.49□□□□□ -1.37
HDAC6-234ENST00000493923 SLC38A11Q08AI6 406 aa6.49□□□□□ -1.37
HDAC6-234ENST00000493923 HSD52Q0P140 79 aa6.49□□□□□ -1.37
HDAC6-234ENST00000493923 KLF5Q13887 457 aaPredicted RBP6.49□□□□□ -1.37
HDAC6-234ENST00000493923 EDDM3AQ14507 147 aa6.49□□□□□ -1.37
HDAC6-234ENST00000493923 CD300EQ496F6 205 aaPredicted RBP6.49□□□□□ -1.37
HDAC6-234ENST00000493923 MOB1BQ7L9L4 216 aa6.49□□□□□ -1.37
HDAC6-234ENST00000493923 WIPF2Q8TF74 440 aaPredicted RBP6.49□□□□□ -1.37
HDAC6-234ENST00000493923 QTRT1Q9BXR0 403 aaKnown RBP6.49□□□□□ -1.37
HDAC6-234ENST00000493923 PKIBQ9C010 78 aa6.49□□□□□ -1.37
HDAC6-234ENST00000493923 SERTAD4Q9NUC0 356 aa6.49□□□□□ -1.37
HDAC6-234ENST00000493923 IL36GQ9NZH8 169 aa6.49□□□□□ -1.37
HDAC6-234ENST00000493923 NAT8BQ9UHF3 227 aa6.49□□□□□ -1.37
HDAC6-234ENST00000493923 RFNGQ9Y644 331 aa6.49□□□□□ -1.37
HDAC6-234ENST00000493923 IGKV1D-8A0A087WSZ0 117 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 ODAMA1E959 279 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 C7orf71A4D174 169 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 SH2D1BO14796 132 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 PAGE4O60829 102 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 OR5AL1P0C617 328 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 IGHV1-8P0DP01 117 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 AZU1P20160 251 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 CD24P25063 80 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 EDDM3BP56851 147 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 BLCAPP62952 87 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 KIR2DS1Q14954 304 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 BEAN1Q3B7T3 259 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 MPV17L2Q567V2 206 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 PSMG4Q5JS54 123 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 C6orf201Q7Z4U5 140 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 ZNF439Q8NDP4 499 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 TSKUQ8WUA8 353 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 ZNF479Q96JC4 524 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 CHRDL1Q9BU40 450 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 TMEM70Q9BUB7 260 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 POLDIP2Q9Y2S7 368 aa6.48□□□□□ -1.37
HDAC6-234ENST00000493923 COL7A1Q02388 2944 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 SH2D7A6NKC9 451 aaPredicted RBP6.47□□□□□ -1.37
HDAC6-234ENST00000493923 M0R2Z0 102 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 CRXO43186 299 aaPredicted RBP6.47□□□□□ -1.37
HDAC6-234ENST00000493923 MPDU1O75352 247 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 SAP30O75446 220 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 TMEM50AO95807 157 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 SERPINE2P07093 398 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 IGLL1P15814 213 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 CD33P20138 364 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 GPR183P32249 361 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 FUT6P51993 359 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 GNB1P62873 340 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 CX3CL1P78423 397 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 NSUN5P1Q3KNT7 163 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 PRAMEF5Q5TYX0 476 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 LHFPL2Q6ZUX7 228 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 Q6ZVH6 145 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 RTN4RL2Q86UN3 420 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 MMD2Q8IY49 270 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 Q8N2B8 174 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 RPP25LQ8N5L8 163 aaKnown RBP6.47□□□□□ -1.37
HDAC6-234ENST00000493923 STXBP6Q8NFX7 210 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 OR11H6Q8NGC7 330 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 OR4C13Q8NGP0 309 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 OR2K2Q8NGT1 345 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 C18orf32Q8TCD1 76 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 C11orf52Q96A22 123 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 CYYR1Q96J86 154 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 SPATA25Q9BR10 227 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 DERL1Q9BUN8 251 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 CLEC7AQ9BXN2 247 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 WNT10AQ9GZT5 417 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 FAM234AQ9H0X4 552 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 VSIRQ9H7M9 311 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 SLC25A22Q9H936 323 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 OSTCQ9NRP0 149 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 TRAPPC2LQ9UL33 140 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 TCF19Q9Y242 345 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 HILPDAQ9Y5L2 63 aa6.47□□□□□ -1.37
HDAC6-234ENST00000493923 TRGV10A0A0A0MS01 117 aa6.46□□□□□ -1.38
HDAC6-234ENST00000493923 MUC21A0A0G2JKD1 596 aa6.46□□□□□ -1.38
HDAC6-234ENST00000493923 MUC21A0A140T8X8 626 aa6.46□□□□□ -1.38
HDAC6-234ENST00000493923 UBE2L5PA0A1B0GUS4 154 aa6.46□□□□□ -1.38
HDAC6-234ENST00000493923 A0A1W2PP11 408 aa6.46□□□□□ -1.38
HDAC6-234ENST00000493923 SLC17A3O00476 420 aa6.46□□□□□ -1.38
HDAC6-234ENST00000493923 PDCD6O75340 191 aa6.46□□□□□ -1.38
HDAC6-234ENST00000493923 APCSP02743 223 aa6.46□□□□□ -1.38
HDAC6-234ENST00000493923 HTR1DP28221 377 aa6.46□□□□□ -1.38
HDAC6-234ENST00000493923 CRYBA4P53673 196 aa6.46□□□□□ -1.38
HDAC6-234ENST00000493923 MUC21Q5SSG8 566 aa6.46□□□□□ -1.38
HDAC6-234ENST00000493923 SAMD5Q5TGI4 173 aa6.46□□□□□ -1.38
HDAC6-234ENST00000493923 Q6P435 159 aa6.46□□□□□ -1.38
HDAC6-234ENST00000493923 C10orf99Q6UWK7 81 aa6.46□□□□□ -1.38
HDAC6-234ENST00000493923 TMEM14EPQ6UXP3 125 aa6.46□□□□□ -1.38
HDAC6-234ENST00000493923 NBEAL2Q6ZNJ1 2754 aa6.46□□□□□ -1.38
HDAC6-234ENST00000493923 TMEM136Q6ZRR5 245 aa6.46□□□□□ -1.38
HDAC6-234ENST00000493923 BPIFA4PQ86YQ2 179 aa6.46□□□□□ -1.38
HDAC6-234ENST00000493923 VSTM2AQ8TAG5 236 aa6.46□□□□□ -1.38
HDAC6-234ENST00000493923 CHCHD1Q96BP2 118 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms