RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 NUTF2P61970 127 aaKnown RBP16.48■□□□□ 0.23
SNIP1-203ENST00000493916 VWC2Q2TAL6 325 aa16.48■□□□□ 0.23
SNIP1-203ENST00000493916 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.48■□□□□ 0.23
SNIP1-203ENST00000493916 STX12Q86Y82 276 aa16.48■□□□□ 0.23
SNIP1-203ENST00000493916 TMEM252Q8N6L7 170 aa16.48■□□□□ 0.23
SNIP1-203ENST00000493916 NMES1Q9C002 83 aa16.48■□□□□ 0.23
SNIP1-203ENST00000493916 ARL6Q9H0F7 186 aa16.48■□□□□ 0.23
SNIP1-203ENST00000493916 UQCC1Q9NVA1 299 aa16.48■□□□□ 0.23
SNIP1-203ENST00000493916 LCE6AA0A183 80 aa16.47■□□□□ 0.23
SNIP1-203ENST00000493916 IGSF23A1L1A6 192 aa16.47■□□□□ 0.23
SNIP1-203ENST00000493916 RPL7P18124 248 aaKnown RBP16.47■□□□□ 0.23
SNIP1-203ENST00000493916 S100A11P31949 105 aa16.47■□□□□ 0.23
SNIP1-203ENST00000493916 GDF5OSQ5U4N7 250 aa16.47■□□□□ 0.23
SNIP1-203ENST00000493916 SPATA31B1PQ5VZV4 182 aa16.47■□□□□ 0.23
SNIP1-203ENST00000493916 PATE2Q6UY27 113 aa16.47■□□□□ 0.23
SNIP1-203ENST00000493916 CSNK1G2-AS1Q8NCQ2 148 aa16.47■□□□□ 0.23
SNIP1-203ENST00000493916 C16orf92Q96LL3 132 aa16.47■□□□□ 0.23
SNIP1-203ENST00000493916 CLUHP3Q96NS8 147 aa16.47■□□□□ 0.23
SNIP1-203ENST00000493916 UHRF2Q96PU4 802 aa16.47■□□□□ 0.23
SNIP1-203ENST00000493916 RNF24Q9Y225 148 aa16.47■□□□□ 0.23
SNIP1-203ENST00000493916 AGRNO00468 2067 aa16.47■□□□□ 0.23
SNIP1-203ENST00000493916 ZNF705EA8MWA4 302 aaPredicted RBP16.46■□□□□ 0.23
SNIP1-203ENST00000493916 SIX6O95475 246 aa16.46■□□□□ 0.23
SNIP1-203ENST00000493916 HBG1P69891 147 aa16.46■□□□□ 0.23
SNIP1-203ENST00000493916 HBG2P69892 147 aa16.46■□□□□ 0.23
SNIP1-203ENST00000493916 RAB31Q13636 194 aa16.46■□□□□ 0.23
SNIP1-203ENST00000493916 C1QTNF4Q9BXJ3 329 aa16.46■□□□□ 0.23
SNIP1-203ENST00000493916 ARV1Q9H2C2 271 aa16.46■□□□□ 0.23
SNIP1-203ENST00000493916 WDR83OSQ9Y284 106 aa16.46■□□□□ 0.23
SNIP1-203ENST00000493916 RYR2Q92736 4967 aa16.46■□□□□ 0.22
SNIP1-203ENST00000493916 DEFB1P60022 68 aa16.45■□□□□ 0.22
SNIP1-203ENST00000493916 C20orf173Q96LM9 149 aa16.45■□□□□ 0.22
SNIP1-203ENST00000493916 RPRMQ9NS64 109 aa16.45■□□□□ 0.22
SNIP1-203ENST00000493916 CXorf65A6NEN9 183 aa16.44■□□□□ 0.22
SNIP1-203ENST00000493916 CAMLGP49069 296 aa16.44■□□□□ 0.22
SNIP1-203ENST00000493916 CYCSP99999 105 aaKnown RBP16.44■□□□□ 0.22
SNIP1-203ENST00000493916 Q8NAQ8 132 aa16.44■□□□□ 0.22
SNIP1-203ENST00000493916 CLEC5AQ9NY25 188 aa16.44■□□□□ 0.22
SNIP1-203ENST00000493916 ELOA3CA0A087WX78 387 aaPredicted RBP16.43■□□□□ 0.22
SNIP1-203ENST00000493916 A0A087X0K7 114 aa16.43■□□□□ 0.22
SNIP1-203ENST00000493916 NUPR2A6NF83 97 aa16.43■□□□□ 0.22
SNIP1-203ENST00000493916 RLN2P04090 185 aa16.43■□□□□ 0.22
SNIP1-203ENST00000493916 MIFP14174 115 aa16.43■□□□□ 0.22
SNIP1-203ENST00000493916 PMS2P11Q13670 270 aa16.43■□□□□ 0.22
SNIP1-203ENST00000493916 ATP6V1FQ16864 119 aa16.43■□□□□ 0.22
SNIP1-203ENST00000493916 EBLN2Q6P2I7 272 aa16.43■□□□□ 0.22
SNIP1-203ENST00000493916 X6R8D5 127 aa16.43■□□□□ 0.22
SNIP1-203ENST00000493916 A0A0J9YX75 114 aa16.42■□□□□ 0.22
SNIP1-203ENST00000493916 UBE2L5PA0A1B0GUS4 154 aa16.42■□□□□ 0.22
SNIP1-203ENST00000493916 E5RGE8 158 aa16.42■□□□□ 0.22
SNIP1-203ENST00000493916 COX7A2P2O60397 106 aa16.42■□□□□ 0.22
SNIP1-203ENST00000493916 H2BFSP57053 126 aa16.42■□□□□ 0.22
SNIP1-203ENST00000493916 PRR20EP86478 221 aa16.42■□□□□ 0.22
SNIP1-203ENST00000493916 PRR20CP86479 221 aa16.42■□□□□ 0.22
SNIP1-203ENST00000493916 PRR20DP86480 221 aa16.42■□□□□ 0.22
SNIP1-203ENST00000493916 PRR20BP86481 221 aa16.42■□□□□ 0.22
SNIP1-203ENST00000493916 PRR20AP86496 221 aa16.42■□□□□ 0.22
SNIP1-203ENST00000493916 LINC00305Q7Z4B0 112 aa16.42■□□□□ 0.22
SNIP1-203ENST00000493916 CHAC2Q8WUX2 184 aa16.42■□□□□ 0.22
SNIP1-203ENST00000493916 TRAV8-2A0A0B4J237 113 aa16.41■□□□□ 0.22
SNIP1-203ENST00000493916 MRPS12O15235 138 aaKnown RBP16.41■□□□□ 0.22
SNIP1-203ENST00000493916 SSNA1O43805 119 aa16.41■□□□□ 0.22
SNIP1-203ENST00000493916 TMEM37Q8WXS4 190 aa16.41■□□□□ 0.22
SNIP1-203ENST00000493916 OR5AC2Q9NZP5 309 aa16.41■□□□□ 0.22
SNIP1-203ENST00000493916 XCL2Q9UBD3 114 aa16.41■□□□□ 0.22
SNIP1-203ENST00000493916 PLECQ15149 4684 aaKnown RBP16.41■□□□□ 0.22
SNIP1-203ENST00000493916 IGHV4-28A0A0C4DH34 117 aa16.4■□□□□ 0.22
SNIP1-203ENST00000493916 A8MTW9 85 aa16.4■□□□□ 0.22
SNIP1-203ENST00000493916 F6UB75 175 aa16.4■□□□□ 0.22
SNIP1-203ENST00000493916 BAXQ07812 192 aa16.4■□□□□ 0.22
SNIP1-203ENST00000493916 LRRC37A5PQ49AS3 106 aa16.4■□□□□ 0.22
SNIP1-203ENST00000493916 CEMP1Q6PRD7 247 aaPredicted RBP16.4■□□□□ 0.22
SNIP1-203ENST00000493916 Q6ZRG5 221 aa16.4■□□□□ 0.22
SNIP1-203ENST00000493916 ZNF709Q8N972 641 aa16.4■□□□□ 0.22
SNIP1-203ENST00000493916 MFFQ9GZY8 342 aa16.4■□□□□ 0.22
SNIP1-203ENST00000493916 SLC25A31Q9H0C2 315 aa16.4■□□□□ 0.22
SNIP1-203ENST00000493916 H0YIZ8 118 aa16.39■□□□□ 0.21
SNIP1-203ENST00000493916 DEFB4AO15263 64 aa16.39■□□□□ 0.21
SNIP1-203ENST00000493916 MPDU1O75352 247 aa16.39■□□□□ 0.21
SNIP1-203ENST00000493916 JTBO76095 146 aa16.39■□□□□ 0.21
SNIP1-203ENST00000493916 IGKV3-20P01619 116 aa16.39■□□□□ 0.21
SNIP1-203ENST00000493916 CXCL2P19875 107 aa16.39■□□□□ 0.21
SNIP1-203ENST00000493916 RPL29P47914 159 aaKnown RBP16.39■□□□□ 0.21
SNIP1-203ENST00000493916 FGL1Q08830 312 aa16.39■□□□□ 0.21
SNIP1-203ENST00000493916 OPCMLQ14982 345 aa16.39■□□□□ 0.21
SNIP1-203ENST00000493916 FAM78BQ5VT40 261 aa16.39■□□□□ 0.21
SNIP1-203ENST00000493916 C10orf113Q5VZT2 155 aa16.39■□□□□ 0.21
SNIP1-203ENST00000493916 MIC13Q5XKP0 118 aa16.39■□□□□ 0.21
SNIP1-203ENST00000493916 OR4B1Q8NGF8 309 aa16.39■□□□□ 0.21
SNIP1-203ENST00000493916 C11orf45Q8TAV5 145 aa16.39■□□□□ 0.21
SNIP1-203ENST00000493916 DNAJC4Q9NNZ3 241 aa16.39■□□□□ 0.21
SNIP1-203ENST00000493916 PTTG1O95997 202 aa16.38■□□□□ 0.21
SNIP1-203ENST00000493916 RBMY1A1P0DJD3 496 aaKnown RBP16.38■□□□□ 0.21
SNIP1-203ENST00000493916 RBMY1CP0DJD4 496 aa16.38■□□□□ 0.21
SNIP1-203ENST00000493916 PSG9Q00887 426 aa16.38■□□□□ 0.21
SNIP1-203ENST00000493916 RBMY1FQ15415 496 aaKnown RBP16.38■□□□□ 0.21
SNIP1-203ENST00000493916 RNF182Q8N6D2 247 aa16.38■□□□□ 0.21
SNIP1-203ENST00000493916 OR1L4Q8NGR5 311 aa16.38■□□□□ 0.21
SNIP1-203ENST00000493916 PPP1R1CQ8WVI7 109 aa16.38■□□□□ 0.21
SNIP1-203ENST00000493916 ALMS1Q8TCU4 4167 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms