RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 SMAD5-AS1Q9Y6J3 95 aa13.35□□□□□ -0.27
PDLIM7-208ENST00000493815 OR4C46A6NHA9 309 aa13.34□□□□□ -0.27
PDLIM7-208ENST00000493815 SNRPCP09234 159 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-208ENST00000493815 OR1L4Q8NGR5 311 aa13.34□□□□□ -0.27
PDLIM7-208ENST00000493815 CYTL1Q9NRR1 136 aa13.34□□□□□ -0.27
PDLIM7-208ENST00000493815 C1QBP02746 253 aa13.34□□□□□ -0.27
PDLIM7-208ENST00000493815 ATP6V0CP27449 155 aa13.34□□□□□ -0.27
PDLIM7-208ENST00000493815 ZNF345Q14585 488 aa13.34□□□□□ -0.27
PDLIM7-208ENST00000493815 ODF3L2Q3SX64 289 aa13.34□□□□□ -0.27
PDLIM7-208ENST00000493815 SPATA31B1PQ5VZV4 182 aa13.34□□□□□ -0.27
PDLIM7-208ENST00000493815 DEFB125Q8N687 156 aa13.34□□□□□ -0.27
PDLIM7-208ENST00000493815 DCANP1Q8TF63 244 aa13.34□□□□□ -0.27
PDLIM7-208ENST00000493815 PFDN5Q99471 154 aa13.34□□□□□ -0.27
PDLIM7-208ENST00000493815 SEPSECSQ9HD40 501 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-208ENST00000493815 KCNIP2Q9NS61 270 aa13.34□□□□□ -0.27
PDLIM7-208ENST00000493815 C19orf73Q9NVV2 129 aa13.34□□□□□ -0.27
PDLIM7-208ENST00000493815 BORCS7-ASMTA0A0B4J1R7 106 aa13.33□□□□□ -0.28
PDLIM7-208ENST00000493815 GATAD1Q8WUU5 269 aa13.33□□□□□ -0.28
PDLIM7-208ENST00000493815 C17orf77Q96MU5 243 aa13.33□□□□□ -0.28
PDLIM7-208ENST00000493815 NRN1Q9NPD7 142 aa13.33□□□□□ -0.28
PDLIM7-208ENST00000493815 OR11H12B2RN74 326 aa13.32□□□□□ -0.28
PDLIM7-208ENST00000493815 K7EQG2 157 aa13.32□□□□□ -0.28
PDLIM7-208ENST00000493815 TAAR5O14804 337 aa13.32□□□□□ -0.28
PDLIM7-208ENST00000493815 EIF3GO75821 320 aaKnown RBP eCLIP13.32□□□□□ -0.28
PDLIM7-208ENST00000493815 S100A7P31151 101 aa13.32□□□□□ -0.28
PDLIM7-208ENST00000493815 ZNF124Q15973 351 aa13.32□□□□□ -0.28
PDLIM7-208ENST00000493815 FAM78BQ5VT40 261 aa13.32□□□□□ -0.28
PDLIM7-208ENST00000493815 S100A7AQ86SG5 101 aa13.32□□□□□ -0.28
PDLIM7-208ENST00000493815 ARPC5LQ9BPX5 153 aa13.32□□□□□ -0.28
PDLIM7-208ENST00000493815 PRKDCP78527 4128 aaKnown RBP13.31□□□□□ -0.28
PDLIM7-208ENST00000493815 A0A0D9SG52 128 aa13.31□□□□□ -0.28
PDLIM7-208ENST00000493815 ZNF688P0C7X2 276 aa13.31□□□□□ -0.28
PDLIM7-208ENST00000493815 IGHV4-30-4P0DP06 118 aa13.31□□□□□ -0.28
PDLIM7-208ENST00000493815 GALR1P47211 349 aa13.31□□□□□ -0.28
PDLIM7-208ENST00000493815 TMUB2Q71RG4 321 aa13.31□□□□□ -0.28
PDLIM7-208ENST00000493815 MIR17HGQ75NE6 70 aa13.31□□□□□ -0.28
PDLIM7-208ENST00000493815 APRG1Q8IVJ8 170 aa13.31□□□□□ -0.28
PDLIM7-208ENST00000493815 RPL7P18124 248 aaKnown RBP13.31□□□□□ -0.28
PDLIM7-208ENST00000493815 RAB2AP61019 212 aa13.31□□□□□ -0.28
PDLIM7-208ENST00000493815 LGALSLQ3ZCW2 172 aaPredicted RBP13.31□□□□□ -0.28
PDLIM7-208ENST00000493815 TIMM9Q9Y5J7 89 aa13.31□□□□□ -0.28
PDLIM7-208ENST00000493815 H3BTX0 84 aa13.3□□□□□ -0.28
PDLIM7-208ENST00000493815 MRPS12O15235 138 aaKnown RBP13.3□□□□□ -0.28
PDLIM7-208ENST00000493815 JTBO76095 146 aa13.3□□□□□ -0.28
PDLIM7-208ENST00000493815 ZFP69Q49AA0 526 aa13.3□□□□□ -0.28
PDLIM7-208ENST00000493815 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.3□□□□□ -0.28
PDLIM7-208ENST00000493815 HYLS1Q96M11 299 aa13.3□□□□□ -0.28
PDLIM7-208ENST00000493815 CITED4Q96RK1 184 aa13.3□□□□□ -0.28
PDLIM7-208ENST00000493815 MAP6D1Q9H9H5 199 aa13.3□□□□□ -0.28
PDLIM7-208ENST00000493815 TRAV2A0A0B4J234 112 aa13.29□□□□□ -0.28
PDLIM7-208ENST00000493815 KANTRA0A1W2PQU2 76 aa13.29□□□□□ -0.28
PDLIM7-208ENST00000493815 BCL2L11O43521 198 aa13.29□□□□□ -0.28
PDLIM7-208ENST00000493815 PFDN1O60925 122 aa13.29□□□□□ -0.28
PDLIM7-208ENST00000493815 ATF4P18848 351 aaPredicted RBP13.29□□□□□ -0.28
PDLIM7-208ENST00000493815 DEFB131AP59861 70 aa13.29□□□□□ -0.28
PDLIM7-208ENST00000493815 IGFL4Q6B9Z1 124 aa13.29□□□□□ -0.28
PDLIM7-208ENST00000493815 GPR82Q96P67 336 aa13.29□□□□□ -0.28
PDLIM7-208ENST00000493815 SOCS3O14543 225 aa13.28□□□□□ -0.28
PDLIM7-208ENST00000493815 NKX2-5P52952 324 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-208ENST00000493815 PSMG4Q5JS54 123 aa13.28□□□□□ -0.28
PDLIM7-208ENST00000493815 BPIFA4PQ86YQ2 179 aa13.28□□□□□ -0.28
PDLIM7-208ENST00000493815 PSMG3Q9BT73 122 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-208ENST00000493815 ZNF471Q9BX82 626 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-208ENST00000493815 SLC25A2Q9BXI2 301 aa13.28□□□□□ -0.28
PDLIM7-208ENST00000493815 TUBA4BQ9H853 241 aa13.28□□□□□ -0.28
PDLIM7-208ENST00000493815 SRD5A3Q9H8P0 318 aa13.28□□□□□ -0.28
PDLIM7-208ENST00000493815 PYYP10082 97 aa13.28□□□□□ -0.28
PDLIM7-208ENST00000493815 M6PRP20645 277 aa13.28□□□□□ -0.28
PDLIM7-208ENST00000493815 ACOT6Q3I5F7 207 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-208ENST00000493815 OR2G3Q8NGZ4 309 aa13.28□□□□□ -0.28
PDLIM7-208ENST00000493815 GNPNAT1Q96EK6 184 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-208ENST00000493815 LINC00052Q96N35 136 aa13.28□□□□□ -0.28
PDLIM7-208ENST00000493815 FUT9Q9Y231 359 aa13.28□□□□□ -0.28
PDLIM7-208ENST00000493815 H3BQ15 152 aa13.27□□□□□ -0.29
PDLIM7-208ENST00000493815 FRMD6-AS1P0C7T7 363 aa13.27□□□□□ -0.29
PDLIM7-208ENST00000493815 FAM122CQ6P4D5 195 aa13.27□□□□□ -0.29
PDLIM7-208ENST00000493815 OR10G4Q8NGN3 311 aa13.27□□□□□ -0.29
PDLIM7-208ENST00000493815 OR10G9Q8NGN4 311 aa13.27□□□□□ -0.29
PDLIM7-208ENST00000493815 OR10G7Q8NGN6 311 aa13.27□□□□□ -0.29
PDLIM7-208ENST00000493815 FAM167A-AS1Q96KT0 104 aa13.27□□□□□ -0.29
PDLIM7-208ENST00000493815 HMGB3O15347 200 aaKnown RBP13.26□□□□□ -0.29
PDLIM7-208ENST00000493815 PRB4P10163 310 aaPredicted RBP13.26□□□□□ -0.29
PDLIM7-208ENST00000493815 DEFB1P60022 68 aa13.26□□□□□ -0.29
PDLIM7-208ENST00000493815 C16orf92Q96LL3 132 aa13.26□□□□□ -0.29
PDLIM7-208ENST00000493815 RNF24Q9Y225 148 aa13.26□□□□□ -0.29
PDLIM7-208ENST00000493815 IGLC2P0DOY2 106 aa13.25□□□□□ -0.29
PDLIM7-208ENST00000493815 SNRPD3P62318 126 aaKnown RBP13.25□□□□□ -0.29
PDLIM7-208ENST00000493815 RHOBP62745 196 aa13.25□□□□□ -0.29
PDLIM7-208ENST00000493815 SERF2P84101 59 aa13.25□□□□□ -0.29
PDLIM7-208ENST00000493815 C9orf62Q8N4C0 152 aa13.25□□□□□ -0.29
PDLIM7-208ENST00000493815 RNF182Q8N6D2 247 aa13.25□□□□□ -0.29
PDLIM7-208ENST00000493815 C20orf173Q96LM9 149 aa13.25□□□□□ -0.29
PDLIM7-208ENST00000493815 MRPL32Q9BYC8 188 aaKnown RBP13.25□□□□□ -0.29
PDLIM7-208ENST00000493815 A0A087X0K7 114 aa13.24□□□□□ -0.29
PDLIM7-208ENST00000493815 TRAV8-2A0A0B4J237 113 aa13.24□□□□□ -0.29
PDLIM7-208ENST00000493815 RBMY1BA6NDE4 496 aaKnown RBP13.24□□□□□ -0.29
PDLIM7-208ENST00000493815 RBMY1EA6NEQ0 496 aaKnown RBP13.24□□□□□ -0.29
PDLIM7-208ENST00000493815 KNCNA6PVL3 124 aa13.24□□□□□ -0.29
PDLIM7-208ENST00000493815 SLC17A3O00476 420 aa13.24□□□□□ -0.29
PDLIM7-208ENST00000493815 OR10J4P0C629 311 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms