RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 RPL7P18124 248 aaKnown RBP8.26□□□□□ -1.09
COL6A3-213ENST00000493475 ORM2P19652 201 aa8.26□□□□□ -1.09
COL6A3-213ENST00000493475 SPCS2Q15005 226 aa8.26□□□□□ -1.09
COL6A3-213ENST00000493475 C1orf134Q5TEV5 83 aa8.26□□□□□ -1.09
COL6A3-213ENST00000493475 THAP8Q8NA92 274 aa8.26□□□□□ -1.09
COL6A3-213ENST00000493475 LRRC20Q8TCA0 184 aa8.26□□□□□ -1.09
COL6A3-213ENST00000493475 RSG1Q9BU20 258 aa8.26□□□□□ -1.09
COL6A3-213ENST00000493475 KRTAP17-1Q9BYP8 105 aa8.26□□□□□ -1.09
COL6A3-213ENST00000493475 SLC35B3Q9H1N7 401 aa8.26□□□□□ -1.09
COL6A3-213ENST00000493475 PRR13Q9NZ81 148 aa8.26□□□□□ -1.09
COL6A3-213ENST00000493475 STRAPQ9Y3F4 350 aaKnown RBP8.26□□□□□ -1.09
COL6A3-213ENST00000493475 DNAH10Q8IVF4 4471 aa8.26□□□□□ -1.09
COL6A3-213ENST00000493475 IGLV2-18A0A075B6J9 118 aa8.25□□□□□ -1.09
COL6A3-213ENST00000493475 IGKV1D-37A0A075B6S9 117 aa8.25□□□□□ -1.09
COL6A3-213ENST00000493475 ZNF98A6NK75 572 aa8.25□□□□□ -1.09
COL6A3-213ENST00000493475 SOCS3O14543 225 aa8.25□□□□□ -1.09
COL6A3-213ENST00000493475 S100A5P33763 92 aa8.25□□□□□ -1.09
COL6A3-213ENST00000493475 INPP1P49441 399 aa8.25□□□□□ -1.09
COL6A3-213ENST00000493475 FGL1Q08830 312 aa8.25□□□□□ -1.09
COL6A3-213ENST00000493475 PYDC2Q56P42 97 aa8.25□□□□□ -1.09
COL6A3-213ENST00000493475 TMEM256Q8N2U0 113 aa8.25□□□□□ -1.09
COL6A3-213ENST00000493475 LRTM2Q8N967 370 aa8.25□□□□□ -1.09
COL6A3-213ENST00000493475 MCFD2Q8NI22 146 aa8.25□□□□□ -1.09
COL6A3-213ENST00000493475 SMCO3A2RU48 225 aa8.24□□□□□ -1.09
COL6A3-213ENST00000493475 IL5P05113 134 aa8.24□□□□□ -1.09
COL6A3-213ENST00000493475 TSPOP30536 169 aa8.24□□□□□ -1.09
COL6A3-213ENST00000493475 SELENOTP62341 195 aa8.24□□□□□ -1.09
COL6A3-213ENST00000493475 SPANXN5Q5MJ07 72 aa8.24□□□□□ -1.09
COL6A3-213ENST00000493475 TMEM88Q6PEY1 159 aa8.24□□□□□ -1.09
COL6A3-213ENST00000493475 ZNF738Q8NE65 137 aa8.24□□□□□ -1.09
COL6A3-213ENST00000493475 DYNC2LI1Q8TCX1 351 aa8.24□□□□□ -1.09
COL6A3-213ENST00000493475 SLC25A32Q9H2D1 315 aa8.24□□□□□ -1.09
COL6A3-213ENST00000493475 VPS13DQ5THJ4 4388 aa8.23□□□□□ -1.09
COL6A3-213ENST00000493475 A0A1B0GVY2 172 aa8.23□□□□□ -1.09
COL6A3-213ENST00000493475 F6UB75 175 aa8.23□□□□□ -1.09
COL6A3-213ENST00000493475 RTL8CO15255 209 aa8.23□□□□□ -1.09
COL6A3-213ENST00000493475 PITX3O75364 302 aa8.23□□□□□ -1.09
COL6A3-213ENST00000493475 HYPMO75409 117 aa8.23□□□□□ -1.09
COL6A3-213ENST00000493475 ADAP1O75689 374 aa8.23□□□□□ -1.09
COL6A3-213ENST00000493475 TNFSF8P32971 234 aa8.23□□□□□ -1.09
COL6A3-213ENST00000493475 CNN1P51911 297 aaKnown RBP8.23□□□□□ -1.09
COL6A3-213ENST00000493475 CCL18P55774 89 aa8.23□□□□□ -1.09
COL6A3-213ENST00000493475 UBE2MP61081 183 aaKnown RBP8.23□□□□□ -1.09
COL6A3-213ENST00000493475 RHOBP62745 196 aa8.23□□□□□ -1.09
COL6A3-213ENST00000493475 C1orf158Q8N1D5 194 aa8.23□□□□□ -1.09
COL6A3-213ENST00000493475 HIGD1AQ9Y241 93 aa8.23□□□□□ -1.09
COL6A3-213ENST00000493475 BOLA2-SMG1P6H3BVE0 249 aa8.22□□□□□ -1.09
COL6A3-213ENST00000493475 SFT2D2O95562 160 aa8.22□□□□□ -1.09
COL6A3-213ENST00000493475 ATP5G1P05496 136 aa8.22□□□□□ -1.09
COL6A3-213ENST00000493475 HOXB5P09067 269 aa8.22□□□□□ -1.09
COL6A3-213ENST00000493475 OR5G3P0C626 314 aa8.22□□□□□ -1.09
COL6A3-213ENST00000493475 DEFB130BP0DP73 79 aa8.22□□□□□ -1.09
COL6A3-213ENST00000493475 DEFB130AP0DP74 79 aa8.22□□□□□ -1.09
COL6A3-213ENST00000493475 ATP5G3P48201 142 aa8.22□□□□□ -1.09
COL6A3-213ENST00000493475 DEFB1P60022 68 aa8.22□□□□□ -1.09
COL6A3-213ENST00000493475 CLINT1Q14677 625 aa8.22□□□□□ -1.09
COL6A3-213ENST00000493475 SPINK13Q1W4C9 94 aa8.22□□□□□ -1.09
COL6A3-213ENST00000493475 TMEM144Q7Z5S9 345 aa8.22□□□□□ -1.09
COL6A3-213ENST00000493475 SCRT1Q9BWW7 348 aa8.22□□□□□ -1.09
COL6A3-213ENST00000493475 MGAT4CQ9UBM8 478 aa8.22□□□□□ -1.09
COL6A3-213ENST00000493475 PCLOQ9Y6V0 5065 aa8.22□□□□□ -1.09
COL6A3-213ENST00000493475 F5H768 121 aa8.21□□□□□ -1.1
COL6A3-213ENST00000493475 ANXA7P20073 488 aaKnown RBP8.21□□□□□ -1.1
COL6A3-213ENST00000493475 HIST1H1AQ02539 215 aaPredicted RBP8.21□□□□□ -1.1
COL6A3-213ENST00000493475 PXDC1Q5TGL8 231 aa8.21□□□□□ -1.1
COL6A3-213ENST00000493475 Q6ZR54 194 aa8.21□□□□□ -1.1
COL6A3-213ENST00000493475 CYP2G1PQ6ZSU1 146 aa8.21□□□□□ -1.1
COL6A3-213ENST00000493475 ACOT7LQ6ZUV0 252 aa8.21□□□□□ -1.1
COL6A3-213ENST00000493475 OR11H7Q8NGC8 314 aa8.21□□□□□ -1.1
COL6A3-213ENST00000493475 OR10J6PQ8NGY7 276 aa8.21□□□□□ -1.1
COL6A3-213ENST00000493475 C16orf74Q96GX8 76 aa8.21□□□□□ -1.1
COL6A3-213ENST00000493475 LINC01587Q99440 93 aa8.21□□□□□ -1.1
COL6A3-213ENST00000493475 SLC25A39Q9BZJ4 359 aaPredicted RBP8.21□□□□□ -1.1
COL6A3-213ENST00000493475 SLIRPQ9GZT3 109 aaKnown RBP8.21□□□□□ -1.1
COL6A3-213ENST00000493475 DNAH6Q9C0G6 4158 aa8.2□□□□□ -1.1
COL6A3-213ENST00000493475 IGKV1OR2-108A0A075B7D4 117 aa8.2□□□□□ -1.1
COL6A3-213ENST00000493475 CBY3A6NI87 242 aa8.2□□□□□ -1.1
COL6A3-213ENST00000493475 A8MTW9 85 aa8.2□□□□□ -1.1
COL6A3-213ENST00000493475 H3BP45 60 aa8.2□□□□□ -1.1
COL6A3-213ENST00000493475 M0R2Z0 102 aa8.2□□□□□ -1.1
COL6A3-213ENST00000493475 NUDT3O95989 172 aa8.2□□□□□ -1.1
COL6A3-213ENST00000493475 LINC00869P0C866 280 aa8.2□□□□□ -1.1
COL6A3-213ENST00000493475 TAS2R60P59551 318 aa8.2□□□□□ -1.1
COL6A3-213ENST00000493475 TNP2Q05952 138 aa8.2□□□□□ -1.1
COL6A3-213ENST00000493475 PPP1R1AQ13522 171 aa8.2□□□□□ -1.1
COL6A3-213ENST00000493475 SPANXN2Q5MJ10 180 aa8.2□□□□□ -1.1
COL6A3-213ENST00000493475 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.2□□□□□ -1.1
COL6A3-213ENST00000493475 ZNF493Q6ZR52 646 aa8.2□□□□□ -1.1
COL6A3-213ENST00000493475 CCDC28AQ8IWP9 274 aa8.2□□□□□ -1.1
COL6A3-213ENST00000493475 OR10P1Q8NGE3 313 aa8.2□□□□□ -1.1
COL6A3-213ENST00000493475 SHANK2-AS3Q9BTD1 123 aa8.2□□□□□ -1.1
COL6A3-213ENST00000493475 PSENENQ9NZ42 101 aa8.2□□□□□ -1.1
COL6A3-213ENST00000493475 TIMM8BQ9Y5J9 83 aaPredicted RBP8.2□□□□□ -1.1
COL6A3-213ENST00000493475 KIAA1109Q2LD37 5005 aa8.2□□□□□ -1.1
COL6A3-213ENST00000493475 NAP1L6A6NFF2 107 aa8.19□□□□□ -1.1
COL6A3-213ENST00000493475 CCDC160A6NGH7 325 aa8.19□□□□□ -1.1
COL6A3-213ENST00000493475 CENPXA8MT69 81 aa8.19□□□□□ -1.1
COL6A3-213ENST00000493475 ZNF705GA8MUZ8 300 aaPredicted RBP8.19□□□□□ -1.1
COL6A3-213ENST00000493475 FNDC10F2Z333 226 aa8.19□□□□□ -1.1
COL6A3-213ENST00000493475 H3BMQ9 156 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms