RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 DCSTAMPQ9H295 470 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 C8orf4Q9NR00 106 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 ANAPC10Q9UM13 185 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 LRRC42Q9Y546 428 aa2.01□□□□□ -2.09
PTCD3-218ENST00000493430 METTL21EPA6NDL7 271 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 FAM25EA8MYX2 175 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 H3BP45 60 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 TGOLN2O43493 480 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 PGLYRP1O75594 196 aaPredicted RBP2□□□□□ -2.09
PTCD3-218ENST00000493430 EIF3GO75821 320 aaKnown RBP eCLIP2□□□□□ -2.09
PTCD3-218ENST00000493430 RBBP9O75884 186 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 MT-CO2P00403 227 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 OR5AC1P0C628 307 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 RNASE2P10153 161 aaKnown RBP2□□□□□ -2.09
PTCD3-218ENST00000493430 IAPPP10997 89 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 PGAM2P15259 253 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 CBLN1P23435 193 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 HLA-DMBP28068 263 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 LGALS7P47929 136 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 RPL8P62917 257 aaKnown RBP2□□□□□ -2.09
PTCD3-218ENST00000493430 SCGB2B2Q4G0G5 96 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 Q56UQ5 140 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 GDF5OSQ5U4N7 250 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 ATRAIDQ6UW56 229 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 LINC00322Q6ZN03 302 aaPredicted RBP2□□□□□ -2.09
PTCD3-218ENST00000493430 Q6ZS49 121 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 ZNF429Q86V71 674 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 CLVS1Q8IUQ0 354 aaPredicted RBP2□□□□□ -2.09
PTCD3-218ENST00000493430 SGPP2Q8IWX5 399 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 TTC9CQ8N5M4 171 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 ZNF436-AS1Q8NC38 126 aaPredicted RBP2□□□□□ -2.09
PTCD3-218ENST00000493430 OR4C16Q8NGL9 310 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 TMEM230Q96A57 120 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 SEC22AQ96IW7 307 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 PARD6GQ9BYG4 376 aaPredicted RBP2□□□□□ -2.09
PTCD3-218ENST00000493430 MAGT1Q9H0U3 335 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 TUBA4BQ9H853 241 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 NRN1Q9NPD7 142 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 SLC2A9Q9NRM0 540 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 ZNF257Q9Y2Q1 563 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 OR51B2Q9Y5P1 312 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 VPS13DQ5THJ4 4388 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 DNAH6Q9C0G6 4158 aa2□□□□□ -2.09
PTCD3-218ENST00000493430 FAM223BA6NKX1 122 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 A8MWP6 167 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 F6UB75 175 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 H3BMQ9 156 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 BOLA2-SMG1P6H3BVE0 249 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 I3L2K1 104 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 GPR31O00270 319 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 RGS5O15539 181 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 GGCTO75223 188 aaKnown RBP1.99□□□□□ -2.09
PTCD3-218ENST00000493430 YIF1AO95070 293 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 GABARAPO95166 117 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 LY6G6CO95867 125 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 SERPINE2P07093 398 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 CRYGCP07315 174 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 CTSGP08311 255 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 ZNF688P0C7X2 276 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 ZNF705DP0CH99 300 aaPredicted RBP1.99□□□□□ -2.09
PTCD3-218ENST00000493430 ZNF705BP0CI00 300 aaPredicted RBP1.99□□□□□ -2.09
PTCD3-218ENST00000493430 TRAPPC2P0DI81 140 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 TRAPPC2BP0DI82 140 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 RBMY1A1P0DJD3 496 aaKnown RBP1.99□□□□□ -2.09
PTCD3-218ENST00000493430 RBMY1CP0DJD4 496 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 DEFA4P12838 97 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 ZP3P21754 424 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 F2RP25116 425 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 PRSS3P35030 304 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 FUSP35637 526 aaKnown RBP eCLIP1.99□□□□□ -2.09
PTCD3-218ENST00000493430 KIR2DS2P43631 304 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 ALDH3B2P48448 385 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 CCR6P51684 374 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 AKR1C2P52895 323 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 PIGPP57054 158 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 DEFB131AP59861 70 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 SUPT4H1P63272 117 aaKnown RBP1.99□□□□□ -2.09
PTCD3-218ENST00000493430 TMEM267Q0VDI3 215 aaPredicted RBP1.99□□□□□ -2.09
PTCD3-218ENST00000493430 OR2F1Q13607 317 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 RBMY1FQ15415 496 aaKnown RBP1.99□□□□□ -2.09
PTCD3-218ENST00000493430 USF2Q15853 346 aaPredicted RBP1.99□□□□□ -2.09
PTCD3-218ENST00000493430 ZNF57Q68EA5 555 aaPredicted RBP1.99□□□□□ -2.09
PTCD3-218ENST00000493430 PLET1Q6UQ28 207 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 TOMM20LQ6UXN7 152 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 TCF24Q7RTU0 167 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 LYG2Q86SG7 212 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 LHFPL1Q86WI0 220 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 GPHB5Q86YW7 130 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 FAM223AQ8IWN6 122 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 SLC38A6Q8IZM9 456 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 TCTEX1D1Q8N7M0 179 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 GDPD1Q8N9F7 314 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 NECAP1Q8NC96 275 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 STXBP6Q8NFX7 210 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 CD300LFQ8TDQ1 290 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 EEF1AKMT3Q96AZ1 226 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 ISOC1Q96CN7 298 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 DGCR14Q96DF8 476 aaKnown RBP1.99□□□□□ -2.09
PTCD3-218ENST00000493430 ADTRPQ96IZ2 230 aa1.99□□□□□ -2.09
PTCD3-218ENST00000493430 HSD17B10Q99714 261 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms