RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 LEAP2Q969E1 77 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 PMCHL2Q9BQD1 86 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 ST20Q9HBF5 79 aa10.19□□□□□ -0.78
HDAC3-213ENST00000492506 FRAS1Q86XX4 4008 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 KBTBD11-OT1A0A1B0GTJ5 212 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 SLC33A1O00400 549 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-213ENST00000492506 HMGB3O15347 200 aaKnown RBP10.18□□□□□ -0.78
HDAC3-213ENST00000492506 CST7O76096 145 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 IGHV3-7P01780 117 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 ELANEP08246 267 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 FRMD6-AS1P0C7T7 363 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 CD1BP29016 333 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 REG1BP48304 166 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 KRTDAPP60985 99 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 ZNF726P1Q15940 193 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 PHLDA2Q53GA4 152 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 CXorf66Q5JRM2 361 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-213ENST00000492506 ASPHD1Q5U4P2 390 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 OR4A47Q6IF82 309 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 Q8N6K4 173 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 OR10P1Q8NGE3 313 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 C4orf3Q8WVX3 66 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 WDR61Q9GZS3 305 aaKnown RBP10.18□□□□□ -0.78
HDAC3-213ENST00000492506 MRPL18Q9H0U6 180 aaKnown RBP10.18□□□□□ -0.78
HDAC3-213ENST00000492506 LINC00574Q9H8X3 128 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 EDA2RQ9HAV5 297 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 IL36BQ9NZH7 164 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 ZNF581Q9P0T4 197 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 FBXL7Q9UJT9 491 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 PSG11Q9UQ72 335 aa10.18□□□□□ -0.78
HDAC3-213ENST00000492506 AMMECR1Q9Y4X0 333 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-213ENST00000492506 RBFOX2O43251 390 aaKnown RBP eCLIP10.17□□□□□ -0.78
HDAC3-213ENST00000492506 IGHG4P01861 327 aa10.17□□□□□ -0.78
HDAC3-213ENST00000492506 HINT1P49773 126 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-213ENST00000492506 INSL3P51460 131 aa10.17□□□□□ -0.78
HDAC3-213ENST00000492506 ADAMTSL5Q6ZMM2 481 aa10.17□□□□□ -0.78
HDAC3-213ENST00000492506 DEFB125Q8N687 156 aa10.17□□□□□ -0.78
HDAC3-213ENST00000492506 Q8N9W7 124 aa10.17□□□□□ -0.78
HDAC3-213ENST00000492506 OR11H1Q8NG94 326 aa10.17□□□□□ -0.78
HDAC3-213ENST00000492506 OR10G8Q8NGN5 311 aa10.17□□□□□ -0.78
HDAC3-213ENST00000492506 MYOZ3Q8TDC0 251 aa10.17□□□□□ -0.78
HDAC3-213ENST00000492506 LSM10Q969L4 123 aaKnown RBP10.17□□□□□ -0.78
HDAC3-213ENST00000492506 SFRP2Q96HF1 295 aa10.17□□□□□ -0.78
HDAC3-213ENST00000492506 EAF1Q96JC9 268 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-213ENST00000492506 NRN1Q9NPD7 142 aa10.17□□□□□ -0.78
HDAC3-213ENST00000492506 LIN7CQ9NUP9 197 aaKnown RBP10.17□□□□□ -0.78
HDAC3-213ENST00000492506 IL36GQ9NZH8 169 aa10.17□□□□□ -0.78
HDAC3-213ENST00000492506 FAM90A10PA6NDY2 464 aa10.16□□□□□ -0.78
HDAC3-213ENST00000492506 FAM90A7PA6NKC0 464 aa10.16□□□□□ -0.78
HDAC3-213ENST00000492506 FAM90A23PA8MXZ1 464 aa10.16□□□□□ -0.78
HDAC3-213ENST00000492506 M0R1X1 148 aa10.16□□□□□ -0.78
HDAC3-213ENST00000492506 OR7C2O60412 319 aa10.16□□□□□ -0.78
HDAC3-213ENST00000492506 ZNF324O75467 553 aaPredicted RBP10.16□□□□□ -0.78
HDAC3-213ENST00000492506 PPYP01298 95 aa10.16□□□□□ -0.78
HDAC3-213ENST00000492506 PSMB8P28062 276 aa10.16□□□□□ -0.78
HDAC3-213ENST00000492506 AMTP48728 403 aa10.16□□□□□ -0.78
HDAC3-213ENST00000492506 FXYD4P59646 89 aa10.16□□□□□ -0.78
HDAC3-213ENST00000492506 SAMD13Q5VXD3 122 aa10.16□□□□□ -0.78
HDAC3-213ENST00000492506 ODF3L1Q8IXM7 274 aa10.16□□□□□ -0.78
HDAC3-213ENST00000492506 OR13A1Q8NGR1 328 aa10.16□□□□□ -0.78
HDAC3-213ENST00000492506 PLPPR1Q8TBJ4 325 aa10.16□□□□□ -0.78
HDAC3-213ENST00000492506 TM2D3Q9BRN9 247 aa10.16□□□□□ -0.78
HDAC3-213ENST00000492506 OR51B2Q9Y5P1 312 aa10.16□□□□□ -0.78
HDAC3-213ENST00000492506 ALMS1Q8TCU4 4167 aa10.16□□□□□ -0.78
HDAC3-213ENST00000492506 NPIPB11E5RHQ5 1161 aa10.15□□□□□ -0.78
HDAC3-213ENST00000492506 ZNF90Q03938 601 aa10.15□□□□□ -0.78
HDAC3-213ENST00000492506 ZNF816Q0VGE8 651 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-213ENST00000492506 TDRG1Q3Y452 100 aa10.15□□□□□ -0.78
HDAC3-213ENST00000492506 FFAR4Q5NUL3 377 aa10.15□□□□□ -0.78
HDAC3-213ENST00000492506 RASL11AQ6T310 242 aa10.15□□□□□ -0.78
HDAC3-213ENST00000492506 SSBP4Q9BWG4 385 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-213ENST00000492506 ZMAT4Q9H898 229 aa10.15□□□□□ -0.78
HDAC3-213ENST00000492506 CALYQ9NYX4 217 aa10.15□□□□□ -0.78
HDAC3-213ENST00000492506 IDI2-AS1Q9NZ38 188 aa10.15□□□□□ -0.78
HDAC3-213ENST00000492506 TP53TG3Q9ULZ0 132 aa10.15□□□□□ -0.78
HDAC3-213ENST00000492506 IGKV1D-8A0A087WSZ0 117 aa10.14□□□□□ -0.79
HDAC3-213ENST00000492506 IGHV3-72A0A0B4J1Y9 119 aa10.14□□□□□ -0.79
HDAC3-213ENST00000492506 IGHV1-3A0A0C4DH29 117 aa10.14□□□□□ -0.79
HDAC3-213ENST00000492506 NCBP2LA6PVI3 153 aaKnown RBP10.14□□□□□ -0.79
HDAC3-213ENST00000492506 NUPR1O60356 82 aa10.14□□□□□ -0.79
HDAC3-213ENST00000492506 HLA-DQA1P01909 254 aa10.14□□□□□ -0.79
HDAC3-213ENST00000492506 LINC00869P0C866 280 aa10.14□□□□□ -0.79
HDAC3-213ENST00000492506 PAX9P55771 341 aa10.14□□□□□ -0.79
HDAC3-213ENST00000492506 SEC11AP67812 179 aa10.14□□□□□ -0.79
HDAC3-213ENST00000492506 LHFPL2Q6ZUX7 228 aa10.14□□□□□ -0.79
HDAC3-213ENST00000492506 TBC1D26Q86UD7 250 aa10.14□□□□□ -0.79
HDAC3-213ENST00000492506 RSG1Q9BU20 258 aa10.14□□□□□ -0.79
HDAC3-213ENST00000492506 TMEM147Q9BVK8 224 aa10.14□□□□□ -0.79
HDAC3-213ENST00000492506 GNB4Q9HAV0 340 aa10.14□□□□□ -0.79
HDAC3-213ENST00000492506 GAGE12BA1L429 117 aa10.13□□□□□ -0.79
HDAC3-213ENST00000492506 C11orf94C9JXX5 98 aa10.13□□□□□ -0.79
HDAC3-213ENST00000492506 NPY1RP25929 384 aa10.13□□□□□ -0.79
HDAC3-213ENST00000492506 LINC00310P59036 64 aa10.13□□□□□ -0.79
HDAC3-213ENST00000492506 RPEL1Q2QD12 228 aa10.13□□□□□ -0.79
HDAC3-213ENST00000492506 FAM53AQ6NSI3 398 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-213ENST00000492506 C6orf201Q7Z4U5 140 aa10.13□□□□□ -0.79
HDAC3-213ENST00000492506 OR5A1Q8NGJ0 315 aa10.13□□□□□ -0.79
HDAC3-213ENST00000492506 OR1N2Q8NGR9 330 aa10.13□□□□□ -0.79
HDAC3-213ENST00000492506 RFESDQ8TAC1 157 aa10.13□□□□□ -0.79
HDAC3-213ENST00000492506 UHRF2Q96PU4 802 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms