RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 DLK1P80370 383 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 SPANXN5Q5MJ07 72 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 SPANXN2Q5MJ10 180 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 EBLN2Q6P2I7 272 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 GSG1LQ6UXU4 331 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 LINC00336Q6ZUF6 198 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 ACOT7LQ6ZUV0 252 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 ZNF767PQ75MW2 155 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 BPIFCQ8NFQ6 507 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 COQ8AQ8NI60 647 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 IGF2BP2-AS1Q96M15 143 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 SLC25A39Q9BZJ4 359 aaPredicted RBP5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 FLVCR2Q9UPI3 526 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 FAT2Q9NYQ8 4349 aa5.95□□□□□ -1.46
SMARCB1-207ENST00000491967 MUC4Q99102 2169 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 A0A087X0K7 114 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 PLAC8L1A1L4L8 177 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 MRPS12O15235 138 aaKnown RBP5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 TSC22D2O75157 780 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 IGKV3-20P01619 116 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 OR4E1P0C645 316 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 TSPOP30536 169 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 FXYD7P58549 80 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 SELENOTP62341 195 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 LGALS9BQ3B8N2 356 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 FAM222AQ5U5X8 452 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 PATE2Q6UY27 113 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 Q6ZR54 194 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 CYP2G1PQ6ZSU1 146 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 OR11H7Q8NGC8 314 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 OR4B1Q8NGF8 309 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 MITD1Q8WV92 249 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 PPP1R14BQ96C90 147 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 C16orf92Q96LL3 132 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 C7orf50Q9BRJ6 194 aaKnown RBP5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 NIPSNAP3BQ9BS92 247 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 TMEM147Q9BVK8 224 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 GOLT1BQ9Y3E0 138 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 KIAA1109Q2LD37 5005 aa5.94□□□□□ -1.46
SMARCB1-207ENST00000491967 DNAH17Q9UFH2 4485 aa5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 LOC102723971A0A1B0GUV8 181 aa5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 H3BP45 60 aa5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 RTL8CO15255 209 aa5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 PLA2G10O15496 165 aa5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 HYPMO75409 117 aa5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 CCNKO75909 580 aa5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 DUSP14O95147 198 aaKnown RBP5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 HBE1P02100 147 aa5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 RPL7P18124 248 aaKnown RBP5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 ORM2P19652 201 aa5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 CXCL3P19876 107 aa5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 CNN1P51911 297 aaKnown RBP5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 B2MP61769 119 aa5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 AKR1C1Q04828 323 aa5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 RNF212Q495C1 297 aa5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 GGACTQ9BVM4 153 aa5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 SLC25A22Q9H936 323 aa5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 NPVFQ9HCQ7 196 aa5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 PSENENQ9NZ42 101 aa5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 PTTG2Q9NZH5 202 aa5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 PLA2G2EQ9NZK7 142 aa5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 PAIP2BQ9ULR5 123 aaKnown RBP5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 RCL1Q9Y2P8 373 aaKnown RBP5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 YTHDF2Q9Y5A9 579 aaKnown RBP5.93□□□□□ -1.46
SMARCB1-207ENST00000491967 DNAH2Q9P225 4427 aa5.92□□□□□ -1.46
SMARCB1-207ENST00000491967 IFNA21P01568 189 aa5.92□□□□□ -1.46
SMARCB1-207ENST00000491967 IL5P05113 134 aa5.92□□□□□ -1.46
SMARCB1-207ENST00000491967 LINC00869P0C866 280 aa5.92□□□□□ -1.46
SMARCB1-207ENST00000491967 EMP1P54849 157 aa5.92□□□□□ -1.46
SMARCB1-207ENST00000491967 ARL16Q0P5N6 197 aa5.92□□□□□ -1.46
SMARCB1-207ENST00000491967 IL15RAQ13261 267 aa5.92□□□□□ -1.46
SMARCB1-207ENST00000491967 RRN3P1Q2M238 152 aa5.92□□□□□ -1.46
SMARCB1-207ENST00000491967 PXDC1Q5TGL8 231 aa5.92□□□□□ -1.46
SMARCB1-207ENST00000491967 C11orf1Q9H5F2 150 aa5.92□□□□□ -1.46
SMARCB1-207ENST00000491967 HIGD1AQ9Y241 93 aa5.92□□□□□ -1.46
SMARCB1-207ENST00000491967 PKHD1P08F94 4074 aa5.92□□□□□ -1.46
SMARCB1-207ENST00000491967 IGHV3OR16-12A0A075B7B8 117 aa5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 C7orf66A4D0T2 115 aa5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 LYRM9A8MSI8 78 aa5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 SSSCA1O60232 199 aa5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 MBPP02686 304 aaPredicted RBP5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 METTL15P1P0C7V9 234 aa5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 IL7P13232 177 aa5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 CXCL2P19875 107 aa5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 ANXA7P20073 488 aaKnown RBP5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 FAM3BP58499 235 aaPredicted RBP5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 RAP2BP61225 183 aa5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 PSG3Q16557 428 aa5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 IGFL4Q6B9Z1 124 aa5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 TEPPQ6URK8 271 aa5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 RNF182Q8N6D2 247 aa5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 ZBTB8BQ8NAP8 495 aaPredicted RBP5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 OR10P1Q8NGE3 313 aa5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 OR8A1Q8NGG7 326 aa5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 CHAC2Q8WUX2 184 aa5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 UHRF2Q96PU4 802 aa5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 RNF24Q9Y225 148 aa5.91□□□□□ -1.46
SMARCB1-207ENST00000491967 CENPXA8MT69 81 aa5.9□□□□□ -1.46
SMARCB1-207ENST00000491967 ZNF705GA8MUZ8 300 aaPredicted RBP5.9□□□□□ -1.46
SMARCB1-207ENST00000491967 BOLA2-SMG1P6H3BVE0 249 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms