RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 SMCO3A2RU48 225 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 A8MTW9 85 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 HYPMO75409 117 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 INSP01308 110 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 EMP1P54849 157 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 PLP1P60201 277 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 DLK1P80370 383 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 RNF212Q495C1 297 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 GDF5OSQ5U4N7 250 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 CYP2G1PQ6ZSU1 146 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 ACOT7LQ6ZUV0 252 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 SMIM8Q96KF7 97 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 IGF2BP2-AS1Q96M15 143 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 GGACTQ9BVM4 153 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 SRRQ9GZT4 340 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 SLC25A32Q9H2D1 315 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 NPVFQ9HCQ7 196 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 MGAT4CQ9UBM8 478 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 DKK2Q9UBU2 259 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 HIGD1AQ9Y241 93 aa6.27□□□□□ -1.41
NUP50-217ENST00000491860 A0A087X0K7 114 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 LOC102723971A0A1B0GUV8 181 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 K7EPK0 472 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 TSC22D2O75157 780 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 OR4E1P0C645 316 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 CXCL2P19875 107 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 FAM3BP58499 235 aaPredicted RBP6.26□□□□□ -1.41
NUP50-217ENST00000491860 FXYD7P58549 80 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 LGALS9BQ3B8N2 356 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 C4orf46Q504U0 113 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 SOHLH1Q5JUK2 328 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 FAM222AQ5U5X8 452 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 TEPPQ6URK8 271 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 UBE2DNLQ8IWF7 75 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 TMEM256Q8N2U0 113 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 C15orf53Q8NAA6 179 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 OR10P1Q8NGE3 313 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 LRRC20Q8TCA0 184 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 SHANK2-AS3Q9BTD1 123 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 SLC25A39Q9BZJ4 359 aaPredicted RBP6.26□□□□□ -1.41
NUP50-217ENST00000491860 SLC35B3Q9H1N7 401 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 PPP1R14DQ9NXH3 145 aa6.26□□□□□ -1.41
NUP50-217ENST00000491860 LYRM9A8MSI8 78 aa6.25□□□□□ -1.41
NUP50-217ENST00000491860 H3BP45 60 aa6.25□□□□□ -1.41
NUP50-217ENST00000491860 H3BRN7 92 aa6.25□□□□□ -1.41
NUP50-217ENST00000491860 SSSCA1O60232 199 aa6.25□□□□□ -1.41
NUP50-217ENST00000491860 LINC00869P0C866 280 aa6.25□□□□□ -1.41
NUP50-217ENST00000491860 TSPOP30536 169 aa6.25□□□□□ -1.41
NUP50-217ENST00000491860 CNN1P51911 297 aaKnown RBP6.25□□□□□ -1.41
NUP50-217ENST00000491860 DAD1P61803 113 aa6.25□□□□□ -1.41
NUP50-217ENST00000491860 POLR2GP62487 172 aaKnown RBP eCLIP6.25□□□□□ -1.41
NUP50-217ENST00000491860 TMEM14EPQ6UXP3 125 aa6.25□□□□□ -1.41
NUP50-217ENST00000491860 GSG1LQ6UXU4 331 aa6.25□□□□□ -1.41
NUP50-217ENST00000491860 ZNF767PQ75MW2 155 aa6.25□□□□□ -1.41
NUP50-217ENST00000491860 ZNF546Q86UE3 836 aa6.25□□□□□ -1.41
NUP50-217ENST00000491860 ABCA13Q86UQ4 5058 aa6.25□□□□□ -1.41
NUP50-217ENST00000491860 FAT2Q9NYQ8 4349 aa6.24□□□□□ -1.41
NUP50-217ENST00000491860 F6UB75 175 aa6.24□□□□□ -1.41
NUP50-217ENST00000491860 ADAP1O75689 374 aa6.24□□□□□ -1.41
NUP50-217ENST00000491860 OR5G3P0C626 314 aa6.24□□□□□ -1.41
NUP50-217ENST00000491860 MED14OSP0DP75 135 aa6.24□□□□□ -1.41
NUP50-217ENST00000491860 FGL1Q08830 312 aa6.24□□□□□ -1.41
NUP50-217ENST00000491860 RAB31Q13636 194 aa6.24□□□□□ -1.41
NUP50-217ENST00000491860 ZNF846Q147U1 533 aa6.24□□□□□ -1.41
NUP50-217ENST00000491860 IAH1Q2TAA2 248 aaPredicted RBP6.24□□□□□ -1.41
NUP50-217ENST00000491860 LCN15Q6UWW0 184 aa6.24□□□□□ -1.41
NUP50-217ENST00000491860 AMTNQ6UX39 209 aa6.24□□□□□ -1.41
NUP50-217ENST00000491860 C1orf158Q8N1D5 194 aa6.24□□□□□ -1.41
NUP50-217ENST00000491860 ZNF738Q8NE65 137 aa6.24□□□□□ -1.41
NUP50-217ENST00000491860 OR11H7Q8NGC8 314 aa6.24□□□□□ -1.41
NUP50-217ENST00000491860 C20orf144Q9BQM9 153 aa6.24□□□□□ -1.41
NUP50-217ENST00000491860 SLC50A1Q9BRV3 221 aa6.24□□□□□ -1.41
NUP50-217ENST00000491860 SCRT1Q9BWW7 348 aa6.24□□□□□ -1.41
NUP50-217ENST00000491860 RBM38Q9H0Z9 239 aaKnown RBP6.24□□□□□ -1.41
NUP50-217ENST00000491860 YTHDF2Q9Y5A9 579 aaKnown RBP6.24□□□□□ -1.41
NUP50-217ENST00000491860 BOLA2-SMG1P6H3BVE0 249 aa6.23□□□□□ -1.41
NUP50-217ENST00000491860 L7N2F9 121 aa6.23□□□□□ -1.41
NUP50-217ENST00000491860 GOSR2O14653 212 aa6.23□□□□□ -1.41
NUP50-217ENST00000491860 ANXA7P20073 488 aaKnown RBP6.23□□□□□ -1.41
NUP50-217ENST00000491860 GATA2P23769 480 aaPredicted RBP6.23□□□□□ -1.41
NUP50-217ENST00000491860 TAS2R60P59551 318 aa6.23□□□□□ -1.41
NUP50-217ENST00000491860 DEFB1P60022 68 aa6.23□□□□□ -1.41
NUP50-217ENST00000491860 VAMP2P63027 116 aa6.23□□□□□ -1.41
NUP50-217ENST00000491860 ZNF493Q6ZR52 646 aa6.23□□□□□ -1.41
NUP50-217ENST00000491860 BPIFA4PQ86YQ2 179 aa6.23□□□□□ -1.41
NUP50-217ENST00000491860 MITD1Q8WV92 249 aa6.23□□□□□ -1.41
NUP50-217ENST00000491860 C16orf74Q96GX8 76 aa6.23□□□□□ -1.41
NUP50-217ENST00000491860 C20orf173Q96LM9 149 aa6.23□□□□□ -1.41
NUP50-217ENST00000491860 ARV1Q9H2C2 271 aa6.23□□□□□ -1.41
NUP50-217ENST00000491860 NDUFA13Q9P0J0 144 aa6.23□□□□□ -1.41
NUP50-217ENST00000491860 TRAV8-2A0A0B4J237 113 aa6.22□□□□□ -1.41
NUP50-217ENST00000491860 PMS2P5A8MQ11 134 aa6.22□□□□□ -1.41
NUP50-217ENST00000491860 COX7A2P2O60397 106 aa6.22□□□□□ -1.41
NUP50-217ENST00000491860 SCGB1D2O95969 90 aa6.22□□□□□ -1.41
NUP50-217ENST00000491860 METTL15P1P0C7V9 234 aa6.22□□□□□ -1.41
NUP50-217ENST00000491860 HTN3P15516 51 aa6.22□□□□□ -1.41
NUP50-217ENST00000491860 CXCL3P19876 107 aa6.22□□□□□ -1.41
NUP50-217ENST00000491860 PVALBP20472 110 aaPredicted RBP6.22□□□□□ -1.41
NUP50-217ENST00000491860 RHOBP62745 196 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms