RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ATG101Q9BSB4 218 aa9.23□□□□□ -0.93
USF1-206ENST00000491629 BIN3Q9NQY0 253 aa9.23□□□□□ -0.93
USF1-206ENST00000491629 GOLT1BQ9Y3E0 138 aa9.23□□□□□ -0.93
USF1-206ENST00000491629 TRAV6A0A075B6T7 132 aa9.22□□□□□ -0.93
USF1-206ENST00000491629 ZNF705GA8MUZ8 300 aaPredicted RBP9.22□□□□□ -0.93
USF1-206ENST00000491629 CRXO43186 299 aaPredicted RBP9.22□□□□□ -0.93
USF1-206ENST00000491629 GSTZ1O43708 216 aaPredicted RBP9.22□□□□□ -0.93
USF1-206ENST00000491629 CDS2O95674 445 aa9.22□□□□□ -0.93
USF1-206ENST00000491629 SMIM6P0DI80 62 aa9.22□□□□□ -0.93
USF1-206ENST00000491629 ANXA3P12429 323 aa9.22□□□□□ -0.93
USF1-206ENST00000491629 SLC24A4Q8NFF2 622 aa9.22□□□□□ -0.93
USF1-206ENST00000491629 GLYATL2Q8WU03 294 aa9.22□□□□□ -0.93
USF1-206ENST00000491629 RRNAD1Q96FB5 475 aaKnown RBP9.22□□□□□ -0.93
USF1-206ENST00000491629 C7orf50Q9BRJ6 194 aaKnown RBP9.22□□□□□ -0.93
USF1-206ENST00000491629 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.22□□□□□ -0.93
USF1-206ENST00000491629 FABP12A6NFH5 140 aa9.21□□□□□ -0.94
USF1-206ENST00000491629 INMT-MINDY4F8WBC2 141 aa9.21□□□□□ -0.94
USF1-206ENST00000491629 NUDT3O95989 172 aa9.21□□□□□ -0.94
USF1-206ENST00000491629 CD3DP04234 171 aa9.21□□□□□ -0.94
USF1-206ENST00000491629 AZU1P20160 251 aa9.21□□□□□ -0.94
USF1-206ENST00000491629 ZNF90Q03938 601 aa9.21□□□□□ -0.94
USF1-206ENST00000491629 MEF2DQ14814 521 aa9.21□□□□□ -0.94
USF1-206ENST00000491629 RNASE12Q5GAN4 147 aaKnown RBP9.21□□□□□ -0.94
USF1-206ENST00000491629 NMSQ5H8A3 153 aa9.21□□□□□ -0.94
USF1-206ENST00000491629 SELENOHQ8IZQ5 122 aaKnown RBP9.21□□□□□ -0.94
USF1-206ENST00000491629 ARL6IP6Q8N6S5 226 aa9.21□□□□□ -0.94
USF1-206ENST00000491629 OR13C8Q8NGS7 320 aa9.21□□□□□ -0.94
USF1-206ENST00000491629 AP3S1Q92572 193 aa9.21□□□□□ -0.94
USF1-206ENST00000491629 TMEM222Q9H0R3 208 aa9.21□□□□□ -0.94
USF1-206ENST00000491629 COMMD3Q9UBI1 195 aa9.21□□□□□ -0.94
USF1-206ENST00000491629 CACNG5Q9UF02 275 aa9.21□□□□□ -0.94
USF1-206ENST00000491629 FAM240BA0A1B0GVZ2 78 aa9.2□□□□□ -0.94
USF1-206ENST00000491629 ATG12O94817 140 aa9.2□□□□□ -0.94
USF1-206ENST00000491629 S100A8P05109 93 aa9.2□□□□□ -0.94
USF1-206ENST00000491629 OR5AC1P0C628 307 aa9.2□□□□□ -0.94
USF1-206ENST00000491629 ID1P41134 155 aa9.2□□□□□ -0.94
USF1-206ENST00000491629 FGL1Q08830 312 aa9.2□□□□□ -0.94
USF1-206ENST00000491629 TRIQKQ629K1 86 aa9.2□□□□□ -0.94
USF1-206ENST00000491629 COQ8AQ8NI60 647 aa9.2□□□□□ -0.94
USF1-206ENST00000491629 MARCH1Q8TCQ1 289 aa9.2□□□□□ -0.94
USF1-206ENST00000491629 RNF141Q8WVD5 230 aa9.2□□□□□ -0.94
USF1-206ENST00000491629 IGF2BP2-AS1Q96M15 143 aa9.2□□□□□ -0.94
USF1-206ENST00000491629 PBDC1Q9BVG4 233 aa9.2□□□□□ -0.94
USF1-206ENST00000491629 MAGT1Q9H0U3 335 aa9.2□□□□□ -0.94
USF1-206ENST00000491629 MED28Q9H204 178 aa9.2□□□□□ -0.94
USF1-206ENST00000491629 LYRM9A8MSI8 78 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 CEBPZOSA8MTT3 80 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 F5H768 121 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 M0R2Z0 102 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 WRBO00258 174 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 ISLRO14498 428 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 LYRM1O43325 122 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 HPGDSO60760 199 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 DEFB130BP0DP73 79 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 DEFB130AP0DP74 79 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 SUPT4H1P63272 117 aaKnown RBP9.19□□□□□ -0.94
USF1-206ENST00000491629 SPATA31B1PQ5VZV4 182 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 OR8G2PQ6IF36 304 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 FAM219AQ8IW50 185 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 ARRDC1Q8N5I2 433 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 OR52I2Q8NH67 350 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 RNASE11Q8TAA1 199 aaKnown RBP9.19□□□□□ -0.94
USF1-206ENST00000491629 RTBDNQ9BSG5 229 aaPredicted RBP9.19□□□□□ -0.94
USF1-206ENST00000491629 MIXL1Q9H2W2 232 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 DOK5Q9P104 306 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 COPZ2Q9P299 210 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 PFDN2Q9UHV9 154 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 SCP2D1Q9UJQ7 156 aa9.19□□□□□ -0.94
USF1-206ENST00000491629 S100PP25815 95 aa9.18□□□□□ -0.94
USF1-206ENST00000491629 GAMTQ14353 236 aa9.18□□□□□ -0.94
USF1-206ENST00000491629 RNASE10Q5GAN6 216 aaKnown RBP9.18□□□□□ -0.94
USF1-206ENST00000491629 ETFRF1Q6IPR1 90 aa9.18□□□□□ -0.94
USF1-206ENST00000491629 EBLN2Q6P2I7 272 aa9.18□□□□□ -0.94
USF1-206ENST00000491629 SSX7Q7RTT5 188 aa9.18□□□□□ -0.94
USF1-206ENST00000491629 STX12Q86Y82 276 aa9.18□□□□□ -0.94
USF1-206ENST00000491629 OR11H7Q8NGC8 314 aa9.18□□□□□ -0.94
USF1-206ENST00000491629 TERB2Q8NHR7 220 aa9.18□□□□□ -0.94
USF1-206ENST00000491629 SEC22CQ9BRL7 303 aa9.18□□□□□ -0.94
USF1-206ENST00000491629 Q9H8V8 135 aa9.18□□□□□ -0.94
USF1-206ENST00000491629 IGKV1OR2-108A0A075B7D4 117 aa9.17□□□□□ -0.94
USF1-206ENST00000491629 TEX13DA0A0J9YY54 714 aaPredicted RBP9.17□□□□□ -0.94
USF1-206ENST00000491629 EPM2AB3EWF7 344 aa9.17□□□□□ -0.94
USF1-206ENST00000491629 TSC22D2O75157 780 aa9.17□□□□□ -0.94
USF1-206ENST00000491629 MPC2O95563 127 aa9.17□□□□□ -0.94
USF1-206ENST00000491629 FABP1P07148 127 aa9.17□□□□□ -0.94
USF1-206ENST00000491629 CCL18P55774 89 aa9.17□□□□□ -0.94
USF1-206ENST00000491629 KLF9Q13886 244 aaPredicted RBP9.17□□□□□ -0.94
USF1-206ENST00000491629 SPINK13Q1W4C9 94 aa9.17□□□□□ -0.94
USF1-206ENST00000491629 LGALSLQ3ZCW2 172 aaPredicted RBP9.17□□□□□ -0.94
USF1-206ENST00000491629 PYDC2Q56P42 97 aa9.17□□□□□ -0.94
USF1-206ENST00000491629 C1orf194Q5T5A4 169 aa9.17□□□□□ -0.94
USF1-206ENST00000491629 IGFL4Q6B9Z1 124 aa9.17□□□□□ -0.94
USF1-206ENST00000491629 BAP18Q8IXM2 172 aa9.17□□□□□ -0.94
USF1-206ENST00000491629 CCDC71LQ8N9Z2 235 aa9.17□□□□□ -0.94
USF1-206ENST00000491629 TCEAL7Q9BRU2 100 aa9.17□□□□□ -0.94
USF1-206ENST00000491629 TMEM208Q9BTX3 173 aa9.17□□□□□ -0.94
USF1-206ENST00000491629 MTFP1Q9UDX5 166 aa9.17□□□□□ -0.94
USF1-206ENST00000491629 LINC00587B1AMM8 73 aa9.16□□□□□ -0.94
USF1-206ENST00000491629 SULT1A3P0DMM9 295 aa9.16□□□□□ -0.94
USF1-206ENST00000491629 SULT1A4P0DMN0 295 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms