RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 RNF2Q99496 336 aa10.31□□□□□ -0.76
CDK9-204ENST00000491521 ACTR3CQ9C0K3 210 aaPredicted RBP10.31□□□□□ -0.76
CDK9-204ENST00000491521 RPRMQ9NS64 109 aa10.31□□□□□ -0.76
CDK9-204ENST00000491521 MRPL27Q9P0M9 148 aaKnown RBP10.31□□□□□ -0.76
CDK9-204ENST00000491521 IGHV3OR16-13A0A075B7E8 117 aa10.3□□□□□ -0.76
CDK9-204ENST00000491521 IGHV3-74A0A0B4J1X5 117 aa10.3□□□□□ -0.76
CDK9-204ENST00000491521 IGHV3-66A0A0C4DH42 116 aa10.3□□□□□ -0.76
CDK9-204ENST00000491521 IFNA7P01567 189 aa10.3□□□□□ -0.76
CDK9-204ENST00000491521 ZNF680Q8NEM1 530 aa10.3□□□□□ -0.76
CDK9-204ENST00000491521 FAM213BQ8TBF2 198 aa10.3□□□□□ -0.76
CDK9-204ENST00000491521 RCHY1Q96PM5 261 aa10.3□□□□□ -0.76
CDK9-204ENST00000491521 SLC25A22Q9H936 323 aa10.3□□□□□ -0.76
CDK9-204ENST00000491521 DAZ1Q9NQZ3 744 aaKnown RBP10.3□□□□□ -0.76
CDK9-204ENST00000491521 PLA2G2EQ9NZK7 142 aa10.3□□□□□ -0.76
CDK9-204ENST00000491521 SELENOKQ9Y6D0 94 aa10.3□□□□□ -0.76
CDK9-204ENST00000491521 APOHP02749 345 aaPredicted RBP10.29□□□□□ -0.76
CDK9-204ENST00000491521 CSN3P07498 182 aa10.29□□□□□ -0.76
CDK9-204ENST00000491521 IGHV4-30-4P0DP06 118 aa10.29□□□□□ -0.76
CDK9-204ENST00000491521 CRYBB3P26998 211 aa10.29□□□□□ -0.76
CDK9-204ENST00000491521 SULT1A2P50226 295 aa10.29□□□□□ -0.76
CDK9-204ENST00000491521 RAB5CP51148 216 aa10.29□□□□□ -0.76
CDK9-204ENST00000491521 MIR17HGQ75NE6 70 aa10.29□□□□□ -0.76
CDK9-204ENST00000491521 RPP25LQ8N5L8 163 aaKnown RBP10.29□□□□□ -0.76
CDK9-204ENST00000491521 GRAMD2BQ96HH9 432 aa10.29□□□□□ -0.76
CDK9-204ENST00000491521 SLC25A39Q9BZJ4 359 aaPredicted RBP10.29□□□□□ -0.76
CDK9-204ENST00000491521 SEPSECSQ9HD40 501 aaKnown RBP10.29□□□□□ -0.76
CDK9-204ENST00000491521 UBQLN2Q9UHD9 624 aa10.29□□□□□ -0.76
CDK9-204ENST00000491521 FUT9Q9Y231 359 aa10.29□□□□□ -0.76
CDK9-204ENST00000491521 TRAV5A0A0B4J249 113 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 IGHV7-4-1A0A0J9YVY3 117 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 A0A1W2PS18 150 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 IZUMO1RA6ND01 250 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 ZNF98A6NK75 572 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 HMGB3O15347 200 aaKnown RBP10.28□□□□□ -0.76
CDK9-204ENST00000491521 EIF3GO75821 320 aaKnown RBP eCLIP10.28□□□□□ -0.76
CDK9-204ENST00000491521 CBLN1P23435 193 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 BMI1P35226 326 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 CDC34P49427 236 aaPredicted RBP10.28□□□□□ -0.76
CDK9-204ENST00000491521 FHITP49789 147 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 SPATA31B1PQ5VZV4 182 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 LEMD1Q68G75 181 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 Q8N1Y9 231 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 DYNLRB2Q8TF09 96 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 RNF141Q8WVD5 230 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 RAB24Q969Q5 203 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 SHANK2-AS3Q9BTD1 123 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 RHPN1-AS1Q9BWJ2 59 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 SCRT1Q9BWW7 348 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 MRPL32Q9BYC8 188 aaKnown RBP10.28□□□□□ -0.76
CDK9-204ENST00000491521 TMEM231Q9H6L2 316 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 ZMAT4Q9H898 229 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 SMPXQ9UHP9 88 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 RNF24Q9Y225 148 aa10.28□□□□□ -0.76
CDK9-204ENST00000491521 TMEM213A2RRL7 107 aa10.27□□□□□ -0.77
CDK9-204ENST00000491521 C2orf70A6NJV1 201 aa10.27□□□□□ -0.77
CDK9-204ENST00000491521 ZNF705EA8MWA4 302 aaPredicted RBP10.27□□□□□ -0.77
CDK9-204ENST00000491521 A8MWP6 167 aa10.27□□□□□ -0.77
CDK9-204ENST00000491521 H3BRN7 92 aa10.27□□□□□ -0.77
CDK9-204ENST00000491521 C8orf88P0DMB2 117 aa10.27□□□□□ -0.77
CDK9-204ENST00000491521 FOLR2P14207 255 aa10.27□□□□□ -0.77
CDK9-204ENST00000491521 EDN2P20800 178 aa10.27□□□□□ -0.77
CDK9-204ENST00000491521 TAS2R45P59539 299 aa10.27□□□□□ -0.77
CDK9-204ENST00000491521 MORN5Q5VZ52 161 aa10.27□□□□□ -0.77
CDK9-204ENST00000491521 LCN12Q6JVE5 192 aa10.27□□□□□ -0.77
CDK9-204ENST00000491521 DPPA3Q6W0C5 159 aa10.27□□□□□ -0.77
CDK9-204ENST00000491521 GTSCR1Q86UQ5 136 aa10.27□□□□□ -0.77
CDK9-204ENST00000491521 OR8I2Q8N0Y5 310 aa10.27□□□□□ -0.77
CDK9-204ENST00000491521 MARC2Q969Z3 335 aa10.27□□□□□ -0.77
CDK9-204ENST00000491521 TUBA4BQ9H853 241 aa10.27□□□□□ -0.77
CDK9-204ENST00000491521 TECRQ9NZ01 308 aaKnown RBP10.27□□□□□ -0.77
CDK9-204ENST00000491521 CTXND1A0A1B0GTU2 59 aa10.26□□□□□ -0.77
CDK9-204ENST00000491521 H2AFB1P0C5Y9 115 aa10.26□□□□□ -0.77
CDK9-204ENST00000491521 RPL11P62913 178 aaKnown RBP10.26□□□□□ -0.77
CDK9-204ENST00000491521 IFITM2Q01629 132 aa10.26□□□□□ -0.77
CDK9-204ENST00000491521 LCN15Q6UWW0 184 aa10.26□□□□□ -0.77
CDK9-204ENST00000491521 IQCF2Q8IXL9 164 aa10.26□□□□□ -0.77
CDK9-204ENST00000491521 SFT2D1Q8WV19 159 aa10.26□□□□□ -0.77
CDK9-204ENST00000491521 U3KQE9 123 aa10.26□□□□□ -0.77
CDK9-204ENST00000491521 A0A1B0GV50 99 aa10.25□□□□□ -0.77
CDK9-204ENST00000491521 CHEK1O14757 476 aa10.25□□□□□ -0.77
CDK9-204ENST00000491521 BUB3O43684 328 aa10.25□□□□□ -0.77
CDK9-204ENST00000491521 OR7C2O60412 319 aa10.25□□□□□ -0.77
CDK9-204ENST00000491521 RAB14P61106 215 aa10.25□□□□□ -0.77
CDK9-204ENST00000491521 BLOC1S1P78537 153 aa10.25□□□□□ -0.77
CDK9-204ENST00000491521 ZNF726P1Q15940 193 aa10.25□□□□□ -0.77
CDK9-204ENST00000491521 GUCA2BQ16661 112 aa10.25□□□□□ -0.77
CDK9-204ENST00000491521 CD300EQ496F6 205 aaPredicted RBP10.25□□□□□ -0.77
CDK9-204ENST00000491521 KHDC3LQ587J8 217 aa10.25□□□□□ -0.77
CDK9-204ENST00000491521 C1orf194Q5T5A4 169 aa10.25□□□□□ -0.77
CDK9-204ENST00000491521 C16orf54Q6UWD8 224 aa10.25□□□□□ -0.77
CDK9-204ENST00000491521 ZNF767PQ75MW2 155 aa10.25□□□□□ -0.77
CDK9-204ENST00000491521 LRRC20Q8TCA0 184 aa10.25□□□□□ -0.77
CDK9-204ENST00000491521 MAP1LC3B2A6NCE7 125 aa10.24□□□□□ -0.77
CDK9-204ENST00000491521 ZNF785A8K8V0 405 aa10.24□□□□□ -0.77
CDK9-204ENST00000491521 TEX46H3BTG2 121 aa10.24□□□□□ -0.77
CDK9-204ENST00000491521 CXorf1O96002 111 aa10.24□□□□□ -0.77
CDK9-204ENST00000491521 RPL7P18124 248 aaKnown RBP10.24□□□□□ -0.77
CDK9-204ENST00000491521 FGF8P55075 233 aaPredicted RBP10.24□□□□□ -0.77
CDK9-204ENST00000491521 CD81P60033 236 aa10.24□□□□□ -0.77
CDK9-204ENST00000491521 ADAMTSL5Q6ZMM2 481 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms