RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 E7EUB6 86 aa17.99■□□□□ 0.47
USF3-203ENST00000491165 M0R143 59 aa17.99■□□□□ 0.47
USF3-203ENST00000491165 CEACAM3P40198 252 aa17.99■□□□□ 0.47
USF3-203ENST00000491165 PDPNQ86YL7 162 aa17.99■□□□□ 0.47
USF3-203ENST00000491165 CDC42EP3Q9UKI2 254 aa17.99■□□□□ 0.47
USF3-203ENST00000491165 COX7A2P2O60397 106 aa17.99■□□□□ 0.47
USF3-203ENST00000491165 AMY1AP04745 511 aa17.99■□□□□ 0.47
USF3-203ENST00000491165 OR1L4Q8NGR5 311 aa17.99■□□□□ 0.47
USF3-203ENST00000491165 RITA1Q96K30 269 aa17.99■□□□□ 0.47
USF3-203ENST00000491165 ZNF430Q9H8G1 570 aaPredicted RBP17.99■□□□□ 0.47
USF3-203ENST00000491165 SERTAD4Q9NUC0 356 aa17.99■□□□□ 0.47
USF3-203ENST00000491165 BRS3P32247 399 aa17.98■□□□□ 0.47
USF3-203ENST00000491165 SUB1P53999 127 aaKnown RBP eCLIP17.98■□□□□ 0.47
USF3-203ENST00000491165 SLC35B1P78383 322 aa17.98■□□□□ 0.47
USF3-203ENST00000491165 OR10J3Q5JRS4 329 aa17.98■□□□□ 0.47
USF3-203ENST00000491165 SIGLECL1Q8N7X8 197 aa17.98■□□□□ 0.47
USF3-203ENST00000491165 SSBP2P81877 361 aaPredicted RBP17.98■□□□□ 0.47
USF3-203ENST00000491165 WT1-ASQ06250 92 aa17.98■□□□□ 0.47
USF3-203ENST00000491165 C10orf113Q5VZT2 155 aa17.98■□□□□ 0.47
USF3-203ENST00000491165 C20orf144Q9BQM9 153 aa17.98■□□□□ 0.47
USF3-203ENST00000491165 HLA-DQA1P01909 254 aa17.97■□□□□ 0.47
USF3-203ENST00000491165 BPIFB3P59826 476 aa17.97■□□□□ 0.47
USF3-203ENST00000491165 TMEM183BQ1AE95 376 aa17.97■□□□□ 0.47
USF3-203ENST00000491165 ZNF355PQ9NSJ1 428 aa17.97■□□□□ 0.47
USF3-203ENST00000491165 RAB4AP20338 218 aa17.96■□□□□ 0.47
USF3-203ENST00000491165 PAXXQ9BUH6 204 aa17.96■□□□□ 0.47
USF3-203ENST00000491165 FNDC4Q9H6D8 234 aaPredicted RBP17.96■□□□□ 0.47
USF3-203ENST00000491165 TCRBV4S1A1TA0A5B7 111 aa17.96■□□□□ 0.47
USF3-203ENST00000491165 CGB1A6NKQ9 187 aa17.96■□□□□ 0.47
USF3-203ENST00000491165 GPX1P07203 203 aa17.96■□□□□ 0.47
USF3-203ENST00000491165 C10orf55Q5SWW7 151 aa17.96■□□□□ 0.47
USF3-203ENST00000491165 MRPL54Q6P161 138 aaKnown RBP17.96■□□□□ 0.47
USF3-203ENST00000491165 VN1R17PQ8TDU5 208 aa17.96■□□□□ 0.47
USF3-203ENST00000491165 NPIPB3Q92617 1050 aa17.96■□□□□ 0.47
USF3-203ENST00000491165 WASHC3Q9Y3C0 194 aa17.96■□□□□ 0.47
USF3-203ENST00000491165 IZUMO1RA6ND01 250 aa17.95■□□□□ 0.46
USF3-203ENST00000491165 TCAPO15273 167 aa17.95■□□□□ 0.46
USF3-203ENST00000491165 PYYP10082 97 aa17.95■□□□□ 0.46
USF3-203ENST00000491165 FOSL1P15407 271 aa17.95■□□□□ 0.46
USF3-203ENST00000491165 DEFB112Q30KQ8 113 aa17.95■□□□□ 0.46
USF3-203ENST00000491165 KIAA1644Q3SXP7 199 aa17.95■□□□□ 0.46
USF3-203ENST00000491165 NHLRC2Q8NBF2 726 aa17.95■□□□□ 0.46
USF3-203ENST00000491165 ZNF586Q9NXT0 402 aa17.95■□□□□ 0.46
USF3-203ENST00000491165 TDRG1Q3Y452 100 aa17.95■□□□□ 0.46
USF3-203ENST00000491165 KCNS1Q96KK3 526 aa17.95■□□□□ 0.46
USF3-203ENST00000491165 ZNF48Q96MX3 618 aaPredicted RBP17.95■□□□□ 0.46
USF3-203ENST00000491165 VAMP8Q9BV40 100 aa17.95■□□□□ 0.46
USF3-203ENST00000491165 IGLV2-23P01705 113 aa17.94■□□□□ 0.46
USF3-203ENST00000491165 ZNF705AQ6ZN79 300 aaPredicted RBP17.94■□□□□ 0.46
USF3-203ENST00000491165 ZNF329Q86UD4 541 aa17.94■□□□□ 0.46
USF3-203ENST00000491165 THAP8Q8NA92 274 aa17.94■□□□□ 0.46
USF3-203ENST00000491165 PIFOQ8TCI5 191 aa17.94■□□□□ 0.46
USF3-203ENST00000491165 LINC00479Q96M42 142 aa17.94■□□□□ 0.46
USF3-203ENST00000491165 FAM103A1Q9BTL3 118 aaKnown RBP17.94■□□□□ 0.46
USF3-203ENST00000491165 FN1P02751 2386 aaKnown RBP17.93■□□□□ 0.46
USF3-203ENST00000491165 TEP1Q99973 2627 aaKnown RBP17.93■□□□□ 0.46
USF3-203ENST00000491165 OOSP1A8MZH6 123 aa17.93■□□□□ 0.46
USF3-203ENST00000491165 BMPR1BO00238 502 aa17.93■□□□□ 0.46
USF3-203ENST00000491165 PATE2Q6UY27 113 aa17.93■□□□□ 0.46
USF3-203ENST00000491165 MIEN1Q9BRT3 115 aa17.93■□□□□ 0.46
USF3-203ENST00000491165 MEGF9Q9H1U4 602 aa17.93■□□□□ 0.46
USF3-203ENST00000491165 FBXL7Q9UJT9 491 aa17.93■□□□□ 0.46
USF3-203ENST00000491165 NF1P21359 2839 aa17.93■□□□□ 0.46
USF3-203ENST00000491165 IGKV1D-37A0A075B6S9 117 aa17.93■□□□□ 0.46
USF3-203ENST00000491165 PEX7O00628 323 aa17.93■□□□□ 0.46
USF3-203ENST00000491165 PLXNB1O43157 2135 aa17.93■□□□□ 0.46
USF3-203ENST00000491165 ZNF253O75346 499 aa17.93■□□□□ 0.46
USF3-203ENST00000491165 CA1P00915 261 aaPredicted RBP17.93■□□□□ 0.46
USF3-203ENST00000491165 CNTFRP26992 372 aa17.93■□□□□ 0.46
USF3-203ENST00000491165 SRIP30626 198 aa17.93■□□□□ 0.46
USF3-203ENST00000491165 CCDC144NLQ6NUI1 221 aa17.93■□□□□ 0.46
USF3-203ENST00000491165 C9orf139Q6ZV77 190 aa17.93■□□□□ 0.46
USF3-203ENST00000491165 FAM231DQ6ZW35 169 aa17.93■□□□□ 0.46
USF3-203ENST00000491165 MRPL52Q86TS9 123 aaKnown RBP17.93■□□□□ 0.46
USF3-203ENST00000491165 NEU1Q99519 415 aa17.93■□□□□ 0.46
USF3-203ENST00000491165 PAM16Q9Y3D7 125 aa17.93■□□□□ 0.46
USF3-203ENST00000491165 COMPP49747 757 aaPredicted RBP17.92■□□□□ 0.46
USF3-203ENST00000491165 VMA21Q3ZAQ7 101 aa17.92■□□□□ 0.46
USF3-203ENST00000491165 ATG101Q9BSB4 218 aa17.92■□□□□ 0.46
USF3-203ENST00000491165 ZNF331Q9NQX6 463 aaPredicted RBP17.92■□□□□ 0.46
USF3-203ENST00000491165 IGHV3-48P01763 117 aa17.92■□□□□ 0.46
USF3-203ENST00000491165 APCSP02743 223 aa17.92■□□□□ 0.46
USF3-203ENST00000491165 AMTP48728 403 aa17.92■□□□□ 0.46
USF3-203ENST00000491165 RCHY1Q96PM5 261 aa17.92■□□□□ 0.46
USF3-203ENST00000491165 M0QZK8 103 aa17.91■□□□□ 0.46
USF3-203ENST00000491165 KRTDAPP60985 99 aa17.91■□□□□ 0.46
USF3-203ENST00000491165 FXYD5Q96DB9 178 aa17.91■□□□□ 0.46
USF3-203ENST00000491165 NIPBLQ6KC79 2804 aaeCLIP17.91■□□□□ 0.46
USF3-203ENST00000491165 A0A1W2PS18 150 aa17.9■□□□□ 0.46
USF3-203ENST00000491165 SLC25A17O43808 307 aa17.9■□□□□ 0.46
USF3-203ENST00000491165 MC5RP33032 325 aa17.9■□□□□ 0.46
USF3-203ENST00000491165 RASL11AQ6T310 242 aa17.9■□□□□ 0.46
USF3-203ENST00000491165 WIPF2Q8TF74 440 aaPredicted RBP17.9■□□□□ 0.46
USF3-203ENST00000491165 NRN1Q9NPD7 142 aa17.9■□□□□ 0.46
USF3-203ENST00000491165 RNF114Q9Y508 228 aa17.9■□□□□ 0.46
USF3-203ENST00000491165 INAFM1C9JVW0 142 aa17.9■□□□□ 0.46
USF3-203ENST00000491165 LINC00305Q7Z4B0 112 aa17.9■□□□□ 0.46
USF3-203ENST00000491165 TMEM160Q9NX00 188 aa17.9■□□□□ 0.46
USF3-203ENST00000491165 MRPL36Q9P0J6 103 aaKnown RBP17.9■□□□□ 0.46
USF3-203ENST00000491165 PMCHP20382 165 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms