RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 CA7P43166 264 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 CSN1S1P47710 185 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 CEBPDP49716 269 aaPredicted RBP1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 CCL11P51671 97 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 HNRNPA3P51991 378 aaKnown RBP1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 MFAP2P55001 183 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 CASP6P55212 293 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 RPL8P62917 257 aaKnown RBP1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 RHOGP84095 191 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 PAX2Q02962 417 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 RIGQ13278 110 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 KIAA1644Q3SXP7 199 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 VMA21Q3ZAQ7 101 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 RPL39P5Q59GN2 51 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 CENPWQ5EE01 88 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 GCSAMLQ5JQS6 135 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 TEX36Q5VZQ5 186 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 FAM71F2Q6NXP2 309 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 IGFL3Q6UXB1 125 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 PATE2Q6UY27 113 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 RBPMS2Q6ZRY4 209 aaKnown RBP1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF833PQ6ZTB9 187 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 MIR17HGQ75NE6 70 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 BHLHA15Q7RTS1 189 aaPredicted RBP1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 TRPT1Q86TN4 253 aaKnown RBP1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 GTSCR1Q86UQ5 136 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 PDPNQ86YL7 162 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 DOLPP1Q86YN1 238 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 VKORC1L1Q8N0U8 176 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 MUC15Q8N387 334 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 FAM19A2Q8N3H0 131 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 ZADH2Q8N4Q0 377 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 C11orf42Q8N5U0 333 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 Q8N976 141 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 THAP8Q8NA92 274 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNRF1Q8ND25 227 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 OR1N2Q8NGR9 330 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 UBALD1Q8TB05 177 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 PIFOQ8TCI5 191 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 TNFRSF14Q92956 283 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 C5orf30Q96GV9 206 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 FMC1Q96HJ9 113 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 FAM167A-AS1Q96KT0 104 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF714Q96N38 554 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 TRGV9Q99603 122 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 SRSF8Q9BRL6 282 aaKnown RBP1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 DCTN5Q9BTE1 182 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 FAM103A1Q9BTL3 118 aaKnown RBP1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 HINT2Q9BX68 163 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 HES7Q9BYE0 225 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM191AQ9H0A3 160 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 RNASE7Q9H1E1 156 aaKnown RBP1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 ARRDC1-AS1Q9H2J1 176 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 GAL3ST2Q9H3Q3 398 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 ST20Q9HBF5 79 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 LPAR2Q9HBW0 351 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 TNFRSF19Q9NS68 423 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 CBLN4Q9NTU7 201 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 CALYQ9NYX4 217 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF492Q9P255 531 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 SPRR3Q9UBC9 169 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 CLCF1Q9UBD9 225 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 KAAG1Q9UBP8 84 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 RPUSD1Q9UJJ7 312 aaKnown RBP1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 HSPB8Q9UJY1 196 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 PPIAL4AQ9Y536 164 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 SLC25A15Q9Y619 301 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 LINC00312Q9Y6C7 94 aa1.61□□□□□ -2.15
SNRNP40-207ENST00000491106 COL27A1Q8IZC6 1860 aaPredicted RBP1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 UTRNP46939 3433 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 PLXNB1O43157 2135 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 ARFGEF3Q5TH69 2177 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 IGKV1OR2-108A0A075B7D4 117 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 LOC102724200A0A096LPH7 203 aaPredicted RBP1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 TRAV5A0A0B4J249 113 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 IGHV2-70DA0A0C4DH43 119 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 IGHV1-69-2A0A0G2JMI3 117 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 A0A0J9YWU9 116 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 A0A1B0GUT8 65 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 SERTM2A0A1B0GWG4 89 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 NDUFAF8A1L188 74 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 C19orf71A6NCJ1 209 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 GAGE10A6NGK3 116 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 HIGD1CA8MV81 97 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 H3BRM9 83 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 K7EM74 188 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 K7ERU9 68 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 M0QZ24 198 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 PEX7O00628 323 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 CDX4O14627 284 aaPredicted RBP1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 CHEK1O14757 476 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 COX7A2P2O60397 106 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 MOSP00540 346 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 P01737 135 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 IGHV4-39P01824 125 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 HLA-DRB1P01911 266 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 PPBPP02775 128 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 SLC25A5P05141 298 aaKnown RBP1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 CRYGBP07316 175 aa1.6□□□□□ -2.15
SNRNP40-207ENST00000491106 FRMD6-AS1P0C7T7 363 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms