RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 LTBRP36941 435 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 C21orf62-AS1Q17RA5 79 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 ZNF672Q499Z4 452 aaPredicted RBP7.27□□□□□ -1.25
LSAMP-205ENST00000490035 H0YJW9 148 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 CD55P08174 381 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 RCHY1Q96PM5 261 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 A0A087WX48 190 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 IGHV3-66A0A0C4DH42 116 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 TCRAP04437 139 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 KLF12Q9Y4X4 402 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 GZMBP10144 247 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 CRIPAKQ8N1N5 446 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 ZNF837Q96EG3 531 aaPredicted RBP7.27□□□□□ -1.25
LSAMP-205ENST00000490035 TMEM141Q96I45 108 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 DMRTA2Q96SC8 542 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 AKIRIN1Q9H9L7 192 aaPredicted RBP7.27□□□□□ -1.25
LSAMP-205ENST00000490035 ST6GALNAC3Q8NDV1 305 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 IGHV3-35A0A0C4DH35 117 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 H0YIZ8 118 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 ERCC8Q13216 396 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 BCL6BQ8N143 479 aaPredicted RBP7.27□□□□□ -1.25
LSAMP-205ENST00000490035 TRAV2A0A0B4J234 112 aa7.26□□□□□ -1.25
LSAMP-205ENST00000490035 COLCA2A8K830 154 aa7.26□□□□□ -1.25
LSAMP-205ENST00000490035 PMS2P5A8MQ11 134 aa7.26□□□□□ -1.25
LSAMP-205ENST00000490035 TMEM95Q3KNT9 176 aa7.26□□□□□ -1.25
LSAMP-205ENST00000490035 CST9LQ9H4G1 147 aa7.26□□□□□ -1.25
LSAMP-205ENST00000490035 INAFM2P0DMQ5 153 aa7.26□□□□□ -1.25
LSAMP-205ENST00000490035 SIGLEC9Q9Y336 463 aa7.26□□□□□ -1.25
LSAMP-205ENST00000490035 NEUROG3Q9Y4Z2 214 aa7.26□□□□□ -1.25
LSAMP-205ENST00000490035 SS18Q15532 418 aa7.26□□□□□ -1.25
LSAMP-205ENST00000490035 CHCHD5Q9BSY4 110 aa7.26□□□□□ -1.25
LSAMP-205ENST00000490035 TDGF1P3P51864 188 aa7.26□□□□□ -1.25
LSAMP-205ENST00000490035 GNG5P63218 68 aa7.26□□□□□ -1.25
LSAMP-205ENST00000490035 SFTA2Q6UW10 78 aa7.26□□□□□ -1.25
LSAMP-205ENST00000490035 PNRC2Q9NPJ4 139 aaKnown RBP7.26□□□□□ -1.25
LSAMP-205ENST00000490035 ZNF492Q9P255 531 aa7.26□□□□□ -1.25
LSAMP-205ENST00000490035 NPIPB5A8MRT5 1133 aa7.26□□□□□ -1.25
LSAMP-205ENST00000490035 Q0VG73 95 aa7.26□□□□□ -1.25
LSAMP-205ENST00000490035 HCFC1P51610 2035 aa7.26□□□□□ -1.25
LSAMP-205ENST00000490035 IGHV3-49A0A0A0MS15 119 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 IGHG3P01860 377 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 PYYP10082 97 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 TRPT1Q86TN4 253 aaKnown RBP7.25□□□□□ -1.25
LSAMP-205ENST00000490035 NUP35Q8NFH5 326 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 VWCEQ96DN2 955 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 H3BMM0 161 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 IGHV4-39P01824 125 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 FNDC4Q9H6D8 234 aaPredicted RBP7.25□□□□□ -1.25
LSAMP-205ENST00000490035 THSD7BQ9C0I4 1608 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 LINC00158P58513 81 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 DAZ1Q9NQZ3 744 aaKnown RBP7.25□□□□□ -1.25
LSAMP-205ENST00000490035 QRFPP83859 136 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 LCN12Q6JVE5 192 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 ZNF562Q6V9R5 426 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 NCOA6Q14686 2063 aaPredicted RBP7.25□□□□□ -1.25
LSAMP-205ENST00000490035 D6R8Y8 96 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 SYS1-DBNDD2H3BUS1 97 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 Q6P435 159 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 GFI1Q99684 422 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 GATA2P23769 480 aaPredicted RBP7.25□□□□□ -1.25
LSAMP-205ENST00000490035 LMO1P25800 156 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 FOXF2Q12947 444 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 SSBP2P81877 361 aaPredicted RBP7.25□□□□□ -1.25
LSAMP-205ENST00000490035 SPACA3Q8IXA5 215 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 LY6G5BQ8NDX9 201 aa7.25□□□□□ -1.25
LSAMP-205ENST00000490035 ZNF106Q9H2Y7 1883 aaKnown RBP7.25□□□□□ -1.25
LSAMP-205ENST00000490035 LINC01356Q8N9X3 169 aa7.24□□□□□ -1.25
LSAMP-205ENST00000490035 MDS2Q8NDY4 140 aa7.24□□□□□ -1.25
LSAMP-205ENST00000490035 IGHV3OR16-13A0A075B7E8 117 aa7.24□□□□□ -1.25
LSAMP-205ENST00000490035 IGHV3-74A0A0B4J1X5 117 aa7.24□□□□□ -1.25
LSAMP-205ENST00000490035 GATA4P43694 442 aa7.24□□□□□ -1.25
LSAMP-205ENST00000490035 F8WEM9 126 aa7.24□□□□□ -1.25
LSAMP-205ENST00000490035 YPEL3P61236 119 aaPredicted RBP7.24□□□□□ -1.25
LSAMP-205ENST00000490035 MUC21Q5SSG8 566 aa7.24□□□□□ -1.25
LSAMP-205ENST00000490035 RPP25LQ8N5L8 163 aaKnown RBP7.24□□□□□ -1.25
LSAMP-205ENST00000490035 CYTL1Q9NRR1 136 aa7.24□□□□□ -1.25
LSAMP-205ENST00000490035 TRAV40A0A0B4J280 105 aa7.24□□□□□ -1.25
LSAMP-205ENST00000490035 CD5LO43866 347 aa7.24□□□□□ -1.25
LSAMP-205ENST00000490035 LINC01545Q5VT33 79 aa7.24□□□□□ -1.25
LSAMP-205ENST00000490035 ZNF474Q6S9Z5 364 aaPredicted RBP7.24□□□□□ -1.25
LSAMP-205ENST00000490035 DEPPQ9NTK1 212 aa7.24□□□□□ -1.25
LSAMP-205ENST00000490035 ZCCHC24Q8N2G6 241 aaKnown RBP7.23□□□□□ -1.25
LSAMP-205ENST00000490035 BMPERQ8N8U9 685 aa7.23□□□□□ -1.25
LSAMP-205ENST00000490035 WFDC1Q9HC57 220 aa7.23□□□□□ -1.25
LSAMP-205ENST00000490035 TMEM14BQ9NUH8 114 aa7.23□□□□□ -1.25
LSAMP-205ENST00000490035 FAM201AQ5SY85 155 aa7.23□□□□□ -1.25
LSAMP-205ENST00000490035 MEGF9Q9H1U4 602 aa7.23□□□□□ -1.25
LSAMP-205ENST00000490035 ZNF319Q9P2F9 582 aa7.23□□□□□ -1.25
LSAMP-205ENST00000490035 IGHV3OR16-10A0A075B7F0 116 aa7.23□□□□□ -1.25
LSAMP-205ENST00000490035 J3QLI3 93 aa7.23□□□□□ -1.25
LSAMP-205ENST00000490035 PRTN3P24158 256 aa7.23□□□□□ -1.25
LSAMP-205ENST00000490035 ATRAIDQ6UW56 229 aa7.23□□□□□ -1.25
LSAMP-205ENST00000490035 IGKV1-12A0A0C4DH73 117 aa7.23□□□□□ -1.25
LSAMP-205ENST00000490035 IGKV1D-12P01611 117 aa7.23□□□□□ -1.25
LSAMP-205ENST00000490035 SRRM4A7MD48 611 aaKnown RBP7.23□□□□□ -1.25
LSAMP-205ENST00000490035 SMAD7O15105 426 aaKnown RBP7.23□□□□□ -1.25
LSAMP-205ENST00000490035 CD59P13987 128 aa7.23□□□□□ -1.25
LSAMP-205ENST00000490035 LIME1Q9H400 295 aa7.23□□□□□ -1.25
LSAMP-205ENST00000490035 ALPK3Q96L96 1907 aa7.22□□□□□ -1.25
LSAMP-205ENST00000490035 H3BQ85 93 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms