RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 TM2D3Q9BRN9 247 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 PBDC1Q9BVG4 233 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 GABARAPL1Q9H0R8 117 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 TNFRSF19Q9NS68 423 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 ZNF355PQ9NSJ1 428 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 LINC00588Q9Y4M8 146 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 PCM1Q15154 2024 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 HEATR5BQ9P2D3 2071 aa2.02□□□□□ -2.09
DEPDC1-204ENST00000489862 FAM208BQ5VWN6 2430 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 IGKV1OR2-108A0A075B7D4 117 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 A0A1B0GV50 99 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 EFCAB10A6NFE3 127 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 RFPL4AA6NLU0 287 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 C9JCJ5 164 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 RFPL4AL1F8VTS6 287 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 OGNP20774 298 aaKnown RBP2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 OPRM1P35372 400 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 EVX1P49640 407 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 KLF3P57682 345 aaPredicted RBP2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 HBA1P69905 142 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 SPANXN3Q5MJ09 141 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 DNLZQ5SXM8 178 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 FAM104BQ5XKR9 115 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 TOMM20LQ6UXN7 152 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 AMN1Q8IY45 258 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 H1FOOQ8IZA3 346 aaPredicted RBP2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 ZFAND2AQ8N6M9 145 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 CYB561D1Q8N8Q1 229 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 ZNF709Q8N972 641 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 OR4D11Q8NGI4 311 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 RPS4Y2Q8TD47 263 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 RTN4IP1Q8WWV3 396 aaPredicted RBP2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 SLC25A46Q96AG3 418 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 MS4A6EQ96DS6 147 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 L3HYPDHQ96EM0 354 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 IMMP1LQ96LU5 166 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 ZNF285Q96NJ3 590 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 TSC22D3Q99576 134 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 CCDC32Q9BV29 185 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 C1QTNF6Q9BXI9 259 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 CHST6Q9GZX3 395 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 ZNRD1Q9P1U0 126 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 PCTPQ9UKL6 214 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 UBR5O95071 2799 aaPredicted RBP2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 NUP214P35658 2090 aaPredicted RBP2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 MDC1Q14676 2089 aaKnown RBP2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 CNTRLQ7Z7A1 2325 aa2.01□□□□□ -2.09
DEPDC1-204ENST00000489862 SPTA1P02549 2419 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 USP9XQ93008 2570 aaPredicted RBP2□□□□□ -2.09
DEPDC1-204ENST00000489862 SETXQ7Z333 2677 aaKnown RBP2□□□□□ -2.09
DEPDC1-204ENST00000489862 IGHV3OR15-7A0A075B7D8 119 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 TMEM269A0A1B0GVZ9 245 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 A0A1B0GW64 132 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 C19orf71A6NCJ1 209 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 DPRXA6NFQ7 191 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 ZNF98A6NK75 572 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 RIIAD1A6NNX1 92 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 I3L521 148 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 K7EM74 188 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 DEGS1O15121 323 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 TNFSF15O95150 251 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 STATHP02808 62 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 BPGMP07738 259 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 IFI30P13284 250 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 ZNF19P17023 458 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 FKBP2P26885 142 aaKnown RBP2□□□□□ -2.09
DEPDC1-204ENST00000489862 G6PCP35575 357 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 POLR2HP52434 150 aaKnown RBP2□□□□□ -2.09
DEPDC1-204ENST00000489862 PIGPP57054 158 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 RPS11P62280 158 aaKnown RBP eCLIP2□□□□□ -2.09
DEPDC1-204ENST00000489862 CENPEQ02224 2701 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 SLC38A11Q08AI6 406 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 OR8G1Q15617 311 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 DEFB116Q30KQ4 102 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 DEFB110Q30KQ9 67 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 Q6Q795 121 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 C16orf47Q6ZP98 133 aaPredicted RBP2□□□□□ -2.09
DEPDC1-204ENST00000489862 RPS27LQ71UM5 84 aaKnown RBP2□□□□□ -2.09
DEPDC1-204ENST00000489862 ANGPTL5Q86XS5 388 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 IFT20Q8IY31 132 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 RNF175Q8N4F7 328 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 MIR7-3HGQ8N6C7 128 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 FER1L6-AS1Q8NA97 138 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 OR10G2Q8NGC3 310 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 STAG3L4Q8TBR4 150 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 ZNF675Q8TD23 568 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 LCN9Q8WX39 176 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 OR5P3Q8WZ94 311 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 H1FXQ92522 213 aaKnown RBP2□□□□□ -2.09
DEPDC1-204ENST00000489862 SLC7A6Q92536 515 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 PLEKHB2Q96CS7 222 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 SCN3AQ9NY46 2000 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 OR5V1Q9UGF6 321 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 U3KQK5 164 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 TACC2O95359 2948 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 DCHS2Q6V1P9 2916 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 MYO18BQ8IUG5 2567 aa2□□□□□ -2.09
DEPDC1-204ENST00000489862 CRYBG3Q68DQ2 2970 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 CELSR2Q9HCU4 2923 aa1.99□□□□□ -2.09
DEPDC1-204ENST00000489862 IGHV3-21A0A0B4J1V1 117 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms