RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 SUPT4H1P63272 117 aaKnown RBP5.12□□□□□ -1.59
COL9A1-209ENST00000489861 DLK1P80370 383 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 ICAM4Q14773 271 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 EBLN2Q6P2I7 272 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 NPIPB3Q92617 1050 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 PPP1R14BQ96C90 147 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 CLUHP3Q96NS8 147 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 GPR82Q96P67 336 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 C7orf50Q9BRJ6 194 aaKnown RBP5.12□□□□□ -1.59
COL9A1-209ENST00000489861 KRTAP1-5Q9BYS1 174 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 RBKSQ9H477 322 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 NDUFA13Q9P0J0 144 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 SLC45A2Q9UMX9 530 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 RFNGQ9Y644 331 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 HLA-DRB4X5D2U9 266 aa5.12□□□□□ -1.59
COL9A1-209ENST00000489861 SFT2D2O95562 160 aa5.11□□□□□ -1.59
COL9A1-209ENST00000489861 HBE1P02100 147 aa5.11□□□□□ -1.59
COL9A1-209ENST00000489861 APOHP02749 345 aaPredicted RBP5.11□□□□□ -1.59
COL9A1-209ENST00000489861 GALR1P47211 349 aa5.11□□□□□ -1.59
COL9A1-209ENST00000489861 FAM3BP58499 235 aaPredicted RBP5.11□□□□□ -1.59
COL9A1-209ENST00000489861 FOXI2Q6ZQN5 318 aa5.11□□□□□ -1.59
COL9A1-209ENST00000489861 LYZL2Q7Z4W2 148 aa5.11□□□□□ -1.59
COL9A1-209ENST00000489861 GLMPQ8WWB7 406 aa5.11□□□□□ -1.59
COL9A1-209ENST00000489861 TRIM63Q969Q1 353 aa5.11□□□□□ -1.59
COL9A1-209ENST00000489861 RNF125Q96EQ8 232 aa5.11□□□□□ -1.59
COL9A1-209ENST00000489861 RAB40CQ96S21 281 aa5.11□□□□□ -1.59
COL9A1-209ENST00000489861 TRGV9Q99603 122 aa5.11□□□□□ -1.59
COL9A1-209ENST00000489861 RPRMQ9NS64 109 aa5.11□□□□□ -1.59
COL9A1-209ENST00000489861 PAIP2BQ9ULR5 123 aaKnown RBP5.11□□□□□ -1.59
COL9A1-209ENST00000489861 U3KQE9 123 aa5.11□□□□□ -1.59
COL9A1-209ENST00000489861 KNCNA6PVL3 124 aa5.1□□□□□ -1.59
COL9A1-209ENST00000489861 ISLRO14498 428 aa5.1□□□□□ -1.59
COL9A1-209ENST00000489861 BUB3O43684 328 aa5.1□□□□□ -1.59
COL9A1-209ENST00000489861 SYNGR2O43760 224 aa5.1□□□□□ -1.59
COL9A1-209ENST00000489861 PITX3O75364 302 aa5.1□□□□□ -1.59
COL9A1-209ENST00000489861 DUSP14O95147 198 aaKnown RBP5.1□□□□□ -1.59
COL9A1-209ENST00000489861 NXPH3O95157 252 aa5.1□□□□□ -1.59
COL9A1-209ENST00000489861 PSG1P11464 419 aa5.1□□□□□ -1.59
COL9A1-209ENST00000489861 OXA1LQ15070 435 aa5.1□□□□□ -1.59
COL9A1-209ENST00000489861 MLANAQ16655 118 aa5.1□□□□□ -1.59
COL9A1-209ENST00000489861 CCDC190Q86UF4 302 aa5.1□□□□□ -1.59
COL9A1-209ENST00000489861 OR8I2Q8N0Y5 310 aa5.1□□□□□ -1.59
COL9A1-209ENST00000489861 C15orf53Q8NAA6 179 aa5.1□□□□□ -1.59
COL9A1-209ENST00000489861 BPIFCQ8NFQ6 507 aa5.1□□□□□ -1.59
COL9A1-209ENST00000489861 NIPSNAP3BQ9BS92 247 aa5.1□□□□□ -1.59
COL9A1-209ENST00000489861 TMEM208Q9BTX3 173 aa5.1□□□□□ -1.59
COL9A1-209ENST00000489861 PBDC1Q9BVG4 233 aa5.1□□□□□ -1.59
COL9A1-209ENST00000489861 PTTG2Q9NZH5 202 aa5.1□□□□□ -1.59
COL9A1-209ENST00000489861 STRAPQ9Y3F4 350 aaKnown RBP5.1□□□□□ -1.59
COL9A1-209ENST00000489861 V9GYH0 126 aa5.1□□□□□ -1.59
COL9A1-209ENST00000489861 MUC2Q02817 5179 aa5.09□□□□□ -1.59
COL9A1-209ENST00000489861 FNDC10F2Z333 226 aa5.09□□□□□ -1.59
COL9A1-209ENST00000489861 H3BMM0 161 aa5.09□□□□□ -1.59
COL9A1-209ENST00000489861 C4BPBP20851 252 aa5.09□□□□□ -1.59
COL9A1-209ENST00000489861 LYZP61626 148 aa5.09□□□□□ -1.59
COL9A1-209ENST00000489861 SELENOTP62341 195 aa5.09□□□□□ -1.59
COL9A1-209ENST00000489861 PSG9Q00887 426 aa5.09□□□□□ -1.59
COL9A1-209ENST00000489861 AKR1C1Q04828 323 aa5.09□□□□□ -1.59
COL9A1-209ENST00000489861 GAMTQ14353 236 aa5.09□□□□□ -1.59
COL9A1-209ENST00000489861 USF2Q15853 346 aaPredicted RBP5.09□□□□□ -1.59
COL9A1-209ENST00000489861 RRN3P1Q2M238 152 aa5.09□□□□□ -1.59
COL9A1-209ENST00000489861 FAM24BQ8N5W8 94 aa5.09□□□□□ -1.59
COL9A1-209ENST00000489861 CSNK1G2-AS1Q8NCQ2 148 aa5.09□□□□□ -1.59
COL9A1-209ENST00000489861 OR4D5Q8NGN0 318 aa5.09□□□□□ -1.59
COL9A1-209ENST00000489861 OR1B1Q8NGR6 318 aa5.09□□□□□ -1.59
COL9A1-209ENST00000489861 DEFB104AQ8WTQ1 72 aa5.09□□□□□ -1.59
COL9A1-209ENST00000489861 LINC00052Q96N35 136 aa5.09□□□□□ -1.59
COL9A1-209ENST00000489861 TMEM147Q9BVK8 224 aa5.09□□□□□ -1.59
COL9A1-209ENST00000489861 MAGT1Q9H0U3 335 aa5.09□□□□□ -1.59
COL9A1-209ENST00000489861 SAV1Q9H4B6 383 aaPredicted RBP5.09□□□□□ -1.59
COL9A1-209ENST00000489861 MRPL36Q9P0J6 103 aaKnown RBP5.09□□□□□ -1.59
COL9A1-209ENST00000489861 XCL2Q9UBD3 114 aa5.09□□□□□ -1.59
COL9A1-209ENST00000489861 C9orf170A2RU37 121 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 NDUFB6O95139 128 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 HOXB5P09067 269 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 IAPPP10997 89 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 PAX9P55771 341 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 TAS2R30P59541 319 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 RAP2BP61225 183 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 PPP1R1AQ13522 171 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 ZNF846Q147U1 533 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 ZNF79Q15937 498 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 C4orf46Q504U0 113 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 SPANXN5Q5MJ07 72 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 PXDC1Q5TGL8 231 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 TMEM88Q6PEY1 159 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 ZNF705AQ6ZN79 300 aaPredicted RBP5.08□□□□□ -1.6
COL9A1-209ENST00000489861 LILRB2Q8N423 598 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 THAP8Q8NA92 274 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 OR4B1Q8NGF8 309 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 C16orf92Q96LL3 132 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 ATG101Q9BSB4 218 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 SRRQ9GZT4 340 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 CLEC5AQ9NY25 188 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 MGAT4CQ9UBM8 478 aa5.08□□□□□ -1.6
COL9A1-209ENST00000489861 IGHV3OR16-12A0A075B7B8 117 aa5.07□□□□□ -1.6
COL9A1-209ENST00000489861 ZNF705FA8MVS1 300 aaPredicted RBP5.07□□□□□ -1.6
COL9A1-209ENST00000489861 ADAP1O75689 374 aa5.07□□□□□ -1.6
COL9A1-209ENST00000489861 OXTP01178 125 aa5.07□□□□□ -1.6
COL9A1-209ENST00000489861 INSP01308 110 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms