RNA–Protein interactions for RNA: ENST00000489638.5

LTA-216, Transcript of lymphotoxin alpha, humanhuman

TSL 5

Gene LTA, Length 1,377 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-216ENST00000489638 SMIM18P0DKX4 95 aa9.05□□□□□ -0.96
LTA-216ENST00000489638 CCL18P55774 89 aa9.05□□□□□ -0.96
LTA-216ENST00000489638 B2MP61769 119 aa9.05□□□□□ -0.96
LTA-216ENST00000489638 GGNBP1Q5YKI7 109 aa9.05□□□□□ -0.96
LTA-216ENST00000489638 RNF182Q8N6D2 247 aa9.05□□□□□ -0.96
LTA-216ENST00000489638 RNF141Q8WVD5 230 aa9.05□□□□□ -0.96
LTA-216ENST00000489638 SCRT2Q9NQ03 307 aa9.05□□□□□ -0.96
LTA-216ENST00000489638 MCUBQ9NWR8 336 aa9.05□□□□□ -0.96
LTA-216ENST00000489638 TRAV12-2A0A075B6T6 113 aa9.04□□□□□ -0.96
LTA-216ENST00000489638 BOLA2-SMG1P6H3BVE0 249 aa9.04□□□□□ -0.96
LTA-216ENST00000489638 PITX3O75364 302 aa9.04□□□□□ -0.96
LTA-216ENST00000489638 ATP5G1P05496 136 aa9.04□□□□□ -0.96
LTA-216ENST00000489638 ORM2P19652 201 aa9.04□□□□□ -0.96
LTA-216ENST00000489638 AZU1P20160 251 aa9.04□□□□□ -0.96
LTA-216ENST00000489638 GATA2P23769 480 aaPredicted RBP9.04□□□□□ -0.96
LTA-216ENST00000489638 ATP5G3P48201 142 aa9.04□□□□□ -0.96
LTA-216ENST00000489638 FGL1Q08830 312 aa9.04□□□□□ -0.96
LTA-216ENST00000489638 FCN2Q15485 313 aa9.04□□□□□ -0.96
LTA-216ENST00000489638 GPR141Q7Z602 305 aa9.04□□□□□ -0.96
LTA-216ENST00000489638 BPIFCQ8NFQ6 507 aa9.04□□□□□ -0.96
LTA-216ENST00000489638 OR4D5Q8NGN0 318 aa9.04□□□□□ -0.96
LTA-216ENST00000489638 OR1B1Q8NGR6 318 aa9.04□□□□□ -0.96
LTA-216ENST00000489638 DIRAS2Q96HU8 199 aa9.04□□□□□ -0.96
LTA-216ENST00000489638 GPR82Q96P67 336 aa9.04□□□□□ -0.96
LTA-216ENST00000489638 TMEM147Q9BVK8 224 aa9.04□□□□□ -0.96
LTA-216ENST00000489638 KRTAP1-5Q9BYS1 174 aa9.04□□□□□ -0.96
LTA-216ENST00000489638 SLC25A39Q9BZJ4 359 aaPredicted RBP9.04□□□□□ -0.96
LTA-216ENST00000489638 DUXBA0A1W2PPF3 345 aa9.03□□□□□ -0.96
LTA-216ENST00000489638 PRSS46E5RG02 174 aa9.03□□□□□ -0.96
LTA-216ENST00000489638 SSX7Q7RTT5 188 aa9.03□□□□□ -0.96
LTA-216ENST00000489638 ZNF738Q8NE65 137 aa9.03□□□□□ -0.96
LTA-216ENST00000489638 PIGBOS1A0A0B4J2F0 54 aa9.02□□□□□ -0.97
LTA-216ENST00000489638 CBY3A6NI87 242 aa9.02□□□□□ -0.97
LTA-216ENST00000489638 AKR1C1Q04828 323 aa9.02□□□□□ -0.97
LTA-216ENST00000489638 CLINT1Q14677 625 aa9.02□□□□□ -0.97
LTA-216ENST00000489638 SPCS2Q15005 226 aa9.02□□□□□ -0.97
LTA-216ENST00000489638 TMEM182Q6ZP80 229 aaPredicted RBP9.02□□□□□ -0.97
LTA-216ENST00000489638 LINC01587Q99440 93 aa9.02□□□□□ -0.97
LTA-216ENST00000489638 RABL2AQ9UBK7 228 aaPredicted RBP9.02□□□□□ -0.97
LTA-216ENST00000489638 RABL2BQ9UNT1 228 aa9.02□□□□□ -0.97
LTA-216ENST00000489638 HERC1Q15751 4861 aa9.02□□□□□ -0.97
LTA-216ENST00000489638 H3BRN7 92 aa9.01□□□□□ -0.97
LTA-216ENST00000489638 MED6O75586 246 aa9.01□□□□□ -0.97
LTA-216ENST00000489638 S100A7P31151 101 aa9.01□□□□□ -0.97
LTA-216ENST00000489638 TAS2R60P59551 318 aa9.01□□□□□ -0.97
LTA-216ENST00000489638 KRTAP10-2P60368 255 aa9.01□□□□□ -0.97
LTA-216ENST00000489638 HIST1H1AQ02539 215 aaPredicted RBP9.01□□□□□ -0.97
LTA-216ENST00000489638 ACOT7LQ6ZUV0 252 aa9.01□□□□□ -0.97
LTA-216ENST00000489638 TMED4Q7Z7H5 227 aa9.01□□□□□ -0.97
LTA-216ENST00000489638 C16orf74Q96GX8 76 aa9.01□□□□□ -0.97
LTA-216ENST00000489638 CIB3Q96Q77 187 aaPredicted RBP9.01□□□□□ -0.97
LTA-216ENST00000489638 H3BP45 60 aa9□□□□□ -0.97
LTA-216ENST00000489638 WRBO00258 174 aa9□□□□□ -0.97
LTA-216ENST00000489638 SLC25A6P12236 298 aa9□□□□□ -0.97
LTA-216ENST00000489638 HTN1P15515 57 aa9□□□□□ -0.97
LTA-216ENST00000489638 VAMP1P23763 118 aa9□□□□□ -0.97
LTA-216ENST00000489638 RHOBP62745 196 aa9□□□□□ -0.97
LTA-216ENST00000489638 RPP30P78346 268 aaKnown RBP9□□□□□ -0.97
LTA-216ENST00000489638 TMEM256Q8N2U0 113 aa9□□□□□ -0.97
LTA-216ENST00000489638 OR8A1Q8NGG7 326 aa9□□□□□ -0.97
LTA-216ENST00000489638 SHANK2-AS3Q9BTD1 123 aa9□□□□□ -0.97
LTA-216ENST00000489638 Q9H8V8 135 aa9□□□□□ -0.97
LTA-216ENST00000489638 PPP1R14DQ9NXH3 145 aa9□□□□□ -0.97
LTA-216ENST00000489638 SYNGR2O43760 224 aa8.99□□□□□ -0.97
LTA-216ENST00000489638 PRB4P10163 310 aaPredicted RBP8.99□□□□□ -0.97
LTA-216ENST00000489638 RPL7P18124 248 aaKnown RBP8.99□□□□□ -0.97
LTA-216ENST00000489638 RAP2BP61225 183 aa8.99□□□□□ -0.97
LTA-216ENST00000489638 TTC32Q5I0X7 151 aa8.99□□□□□ -0.97
LTA-216ENST00000489638 SPANXN5Q5MJ07 72 aa8.99□□□□□ -0.97
LTA-216ENST00000489638 RNASE8Q8TDE3 154 aaKnown RBP8.99□□□□□ -0.97
LTA-216ENST00000489638 Q9H3A6 140 aa8.99□□□□□ -0.97
LTA-216ENST00000489638 NOP10Q9NPE3 64 aaKnown RBP8.99□□□□□ -0.97
LTA-216ENST00000489638 CCDC59Q9P031 241 aaKnown RBP8.99□□□□□ -0.97
LTA-216ENST00000489638 RSL24D1Q9UHA3 163 aaKnown RBP8.99□□□□□ -0.97
LTA-216ENST00000489638 HIGD1AQ9Y241 93 aa8.99□□□□□ -0.97
LTA-216ENST00000489638 TIMM8BQ9Y5J9 83 aaPredicted RBP8.99□□□□□ -0.97
LTA-216ENST00000489638 SMCO3A2RU48 225 aa8.99□□□□□ -0.97
LTA-216ENST00000489638 IL5P05113 134 aa8.99□□□□□ -0.97
LTA-216ENST00000489638 CXCL3P19876 107 aa8.99□□□□□ -0.97
LTA-216ENST00000489638 BTF3P20290 206 aaKnown RBP8.99□□□□□ -0.97
LTA-216ENST00000489638 TMEM128Q5BJH2 165 aa8.99□□□□□ -0.97
LTA-216ENST00000489638 CYP2G1PQ6ZSU1 146 aa8.99□□□□□ -0.97
LTA-216ENST00000489638 TMEM144Q7Z5S9 345 aa8.99□□□□□ -0.97
LTA-216ENST00000489638 LRTM2Q8N967 370 aa8.99□□□□□ -0.97
LTA-216ENST00000489638 TMEM263Q8WUH6 116 aaKnown RBP8.99□□□□□ -0.97
LTA-216ENST00000489638 TRAV26-1A0A087WT03 109 aa8.98□□□□□ -0.97
LTA-216ENST00000489638 A0A087X0K7 114 aa8.98□□□□□ -0.97
LTA-216ENST00000489638 LINC00869P0C866 280 aa8.98□□□□□ -0.97
LTA-216ENST00000489638 FAUP35544 74 aaKnown RBP8.98□□□□□ -0.97
LTA-216ENST00000489638 OR5I1Q13606 314 aa8.98□□□□□ -0.97
LTA-216ENST00000489638 PSG3Q16557 428 aa8.98□□□□□ -0.97
LTA-216ENST00000489638 ZNF493Q6ZR52 646 aa8.98□□□□□ -0.97
LTA-216ENST00000489638 LINC00612Q8N6U2 182 aa8.98□□□□□ -0.97
LTA-216ENST00000489638 OR10J6PQ8NGY7 276 aa8.98□□□□□ -0.97
LTA-216ENST00000489638 DYNC2LI1Q8TCX1 351 aa8.98□□□□□ -0.97
LTA-216ENST00000489638 GNPNAT1Q96EK6 184 aaPredicted RBP8.98□□□□□ -0.97
LTA-216ENST00000489638 UHRF2Q96PU4 802 aa8.98□□□□□ -0.97
LTA-216ENST00000489638 UPK3BQ9BT76 320 aa8.98□□□□□ -0.97
LTA-216ENST00000489638 STRAPQ9Y3F4 350 aaKnown RBP8.98□□□□□ -0.97
LTA-216ENST00000489638 A0A1W2PPQ1 181 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms