RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 AMTNQ6UX39 209 aa9.47□□□□□ -0.89
LINC00173-204ENST00000489452 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.47□□□□□ -0.89
LINC00173-204ENST00000489452 Q6ZR54 194 aa9.47□□□□□ -0.89
LINC00173-204ENST00000489452 TOMM5Q8N4H5 51 aa9.47□□□□□ -0.89
LINC00173-204ENST00000489452 CIB3Q96Q77 187 aaPredicted RBP9.47□□□□□ -0.89
LINC00173-204ENST00000489452 TMEM147Q9BVK8 224 aa9.47□□□□□ -0.89
LINC00173-204ENST00000489452 PIGBOS1A0A0B4J2F0 54 aa9.46□□□□□ -0.9
LINC00173-204ENST00000489452 SMCO3A2RU48 225 aa9.46□□□□□ -0.9
LINC00173-204ENST00000489452 H3BMQ9 156 aa9.46□□□□□ -0.9
LINC00173-204ENST00000489452 SFT2D2O95562 160 aa9.46□□□□□ -0.9
LINC00173-204ENST00000489452 DEFB130BP0DP73 79 aa9.46□□□□□ -0.9
LINC00173-204ENST00000489452 DEFB130AP0DP74 79 aa9.46□□□□□ -0.9
LINC00173-204ENST00000489452 AP3S2P59780 193 aa9.46□□□□□ -0.9
LINC00173-204ENST00000489452 FCN2Q15485 313 aa9.46□□□□□ -0.9
LINC00173-204ENST00000489452 RNF212Q495C1 297 aa9.46□□□□□ -0.9
LINC00173-204ENST00000489452 SAMD13Q5VXD3 122 aa9.46□□□□□ -0.9
LINC00173-204ENST00000489452 LRTM2Q8N967 370 aa9.46□□□□□ -0.9
LINC00173-204ENST00000489452 STRAPQ9Y3F4 350 aaKnown RBP9.46□□□□□ -0.9
LINC00173-204ENST00000489452 TMED3Q9Y3Q3 217 aa9.46□□□□□ -0.9
LINC00173-204ENST00000489452 ABCA13Q86UQ4 5058 aa9.45□□□□□ -0.9
LINC00173-204ENST00000489452 TRAV12-2A0A075B6T6 113 aa9.45□□□□□ -0.9
LINC00173-204ENST00000489452 TRAV8-2A0A0B4J237 113 aa9.45□□□□□ -0.9
LINC00173-204ENST00000489452 PRSS46E5RG02 174 aa9.45□□□□□ -0.9
LINC00173-204ENST00000489452 DUSP14O95147 198 aaKnown RBP9.45□□□□□ -0.9
LINC00173-204ENST00000489452 SLC25A6P12236 298 aa9.45□□□□□ -0.9
LINC00173-204ENST00000489452 SOHLH1Q5JUK2 328 aa9.45□□□□□ -0.9
LINC00173-204ENST00000489452 C1orf134Q5TEV5 83 aa9.45□□□□□ -0.9
LINC00173-204ENST00000489452 ZNF575Q86XF7 245 aa9.45□□□□□ -0.9
LINC00173-204ENST00000489452 ZNF738Q8NE65 137 aa9.45□□□□□ -0.9
LINC00173-204ENST00000489452 OR11H7Q8NGC8 314 aa9.45□□□□□ -0.9
LINC00173-204ENST00000489452 OR4D5Q8NGN0 318 aa9.45□□□□□ -0.9
LINC00173-204ENST00000489452 BCL7BQ9BQE9 202 aa9.45□□□□□ -0.9
LINC00173-204ENST00000489452 ATG101Q9BSB4 218 aa9.45□□□□□ -0.9
LINC00173-204ENST00000489452 SLC25A39Q9BZJ4 359 aaPredicted RBP9.45□□□□□ -0.9
LINC00173-204ENST00000489452 SLC45A2Q9UMX9 530 aa9.45□□□□□ -0.9
LINC00173-204ENST00000489452 CRXO43186 299 aaPredicted RBP9.44□□□□□ -0.9
LINC00173-204ENST00000489452 INSP01308 110 aa9.44□□□□□ -0.9
LINC00173-204ENST00000489452 IL5P05113 134 aa9.44□□□□□ -0.9
LINC00173-204ENST00000489452 HTN1P15515 57 aa9.44□□□□□ -0.9
LINC00173-204ENST00000489452 AZU1P20160 251 aa9.44□□□□□ -0.9
LINC00173-204ENST00000489452 RHOBP62745 196 aa9.44□□□□□ -0.9
LINC00173-204ENST00000489452 ACOT7LQ6ZUV0 252 aa9.44□□□□□ -0.9
LINC00173-204ENST00000489452 BAP18Q8IXM2 172 aa9.44□□□□□ -0.9
LINC00173-204ENST00000489452 TRIM63Q969Q1 353 aa9.44□□□□□ -0.9
LINC00173-204ENST00000489452 GPR82Q96P67 336 aa9.44□□□□□ -0.9
LINC00173-204ENST00000489452 LINC01587Q99440 93 aa9.44□□□□□ -0.9
LINC00173-204ENST00000489452 SLC25A21Q9BQT8 299 aaPredicted RBP9.44□□□□□ -0.9
LINC00173-204ENST00000489452 PPP1R14DQ9NXH3 145 aa9.44□□□□□ -0.9
LINC00173-204ENST00000489452 A8MTW9 85 aa9.43□□□□□ -0.9
LINC00173-204ENST00000489452 F5H768 121 aa9.43□□□□□ -0.9
LINC00173-204ENST00000489452 HYPMO75409 117 aa9.43□□□□□ -0.9
LINC00173-204ENST00000489452 ADAP1O75689 374 aa9.43□□□□□ -0.9
LINC00173-204ENST00000489452 NUDT3O95989 172 aa9.43□□□□□ -0.9
LINC00173-204ENST00000489452 OR5G3P0C626 314 aa9.43□□□□□ -0.9
LINC00173-204ENST00000489452 S100A7P31151 101 aa9.43□□□□□ -0.9
LINC00173-204ENST00000489452 RAP2BP61225 183 aa9.43□□□□□ -0.9
LINC00173-204ENST00000489452 POLR2GP62487 172 aaKnown RBP eCLIP9.43□□□□□ -0.9
LINC00173-204ENST00000489452 HIST1H1AQ02539 215 aaPredicted RBP9.43□□□□□ -0.9
LINC00173-204ENST00000489452 CYP2G1PQ6ZSU1 146 aa9.43□□□□□ -0.9
LINC00173-204ENST00000489452 LRRC20Q8TCA0 184 aa9.43□□□□□ -0.9
LINC00173-204ENST00000489452 PSENENQ9NZ42 101 aa9.43□□□□□ -0.9
LINC00173-204ENST00000489452 HIGD1AQ9Y241 93 aa9.43□□□□□ -0.9
LINC00173-204ENST00000489452 LYRM9A8MSI8 78 aa9.42□□□□□ -0.9
LINC00173-204ENST00000489452 SNRPCP09234 159 aaKnown RBP9.42□□□□□ -0.9
LINC00173-204ENST00000489452 RRAS2P62070 204 aaPredicted RBP9.42□□□□□ -0.9
LINC00173-204ENST00000489452 TMEM144Q7Z5S9 345 aa9.42□□□□□ -0.9
LINC00173-204ENST00000489452 C15orf53Q8NAA6 179 aa9.42□□□□□ -0.9
LINC00173-204ENST00000489452 UHRF2Q96PU4 802 aa9.42□□□□□ -0.9
LINC00173-204ENST00000489452 SHANK2-AS3Q9BTD1 123 aa9.42□□□□□ -0.9
LINC00173-204ENST00000489452 V9GYH0 126 aa9.42□□□□□ -0.9
LINC00173-204ENST00000489452 NACAE9PAV3 2078 aa9.42□□□□□ -0.9
LINC00173-204ENST00000489452 H3BRN7 92 aa9.41□□□□□ -0.9
LINC00173-204ENST00000489452 SSSCA1O60232 199 aa9.41□□□□□ -0.9
LINC00173-204ENST00000489452 CCNKO75909 580 aa9.41□□□□□ -0.9
LINC00173-204ENST00000489452 LINC00869P0C866 280 aa9.41□□□□□ -0.9
LINC00173-204ENST00000489452 RPL7P18124 248 aaKnown RBP9.41□□□□□ -0.9
LINC00173-204ENST00000489452 ID3Q02535 119 aa9.41□□□□□ -0.9
LINC00173-204ENST00000489452 OR8A1Q8NGG7 326 aa9.41□□□□□ -0.9
LINC00173-204ENST00000489452 ARL6Q9H0F7 186 aa9.41□□□□□ -0.9
LINC00173-204ENST00000489452 LINC00854A0A1B0GVQ3 168 aa9.4□□□□□ -0.9
LINC00173-204ENST00000489452 C9orf170A2RU37 121 aa9.4□□□□□ -0.9
LINC00173-204ENST00000489452 CCDC160A6NGH7 325 aa9.4□□□□□ -0.9
LINC00173-204ENST00000489452 BOLA2-SMG1P6H3BVE0 249 aa9.4□□□□□ -0.9
LINC00173-204ENST00000489452 ANXA7P20073 488 aaKnown RBP9.4□□□□□ -0.9
LINC00173-204ENST00000489452 S100A5P33763 92 aa9.4□□□□□ -0.9
LINC00173-204ENST00000489452 PSG3Q16557 428 aa9.4□□□□□ -0.9
LINC00173-204ENST00000489452 FLVCR2Q9UPI3 526 aa9.4□□□□□ -0.9
LINC00173-204ENST00000489452 METTL15P1P0C7V9 234 aa9.39□□□□□ -0.91
LINC00173-204ENST00000489452 CXCL3P19876 107 aa9.39□□□□□ -0.91
LINC00173-204ENST00000489452 B2MP61769 119 aa9.39□□□□□ -0.91
LINC00173-204ENST00000489452 TNP2Q05952 138 aa9.39□□□□□ -0.91
LINC00173-204ENST00000489452 PATE2Q6UY27 113 aa9.39□□□□□ -0.91
LINC00173-204ENST00000489452 KRTAP4-5Q9BYR2 181 aa9.39□□□□□ -0.91
LINC00173-204ENST00000489452 HSPG2P98160 4391 aa9.38□□□□□ -0.91
LINC00173-204ENST00000489452 LRP1BQ9NZR2 4599 aa9.38□□□□□ -0.91
LINC00173-204ENST00000489452 PLAC8L1A1L4L8 177 aa9.38□□□□□ -0.91
LINC00173-204ENST00000489452 CBY3A6NI87 242 aa9.38□□□□□ -0.91
LINC00173-204ENST00000489452 PMS2P5A8MQ11 134 aa9.38□□□□□ -0.91
LINC00173-204ENST00000489452 SCGB1D2O95969 90 aa9.38□□□□□ -0.91
LINC00173-204ENST00000489452 ATP5G1P05496 136 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms