RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 TRAV5A0A0B4J249 113 aa10.58□□□□□ -0.72
CHD1L-208ENST00000488864 IGHV4-31P0DP07 118 aa10.58□□□□□ -0.72
CHD1L-208ENST00000488864 IGLL1P15814 213 aa10.58□□□□□ -0.72
CHD1L-208ENST00000488864 MORN5Q5VZ52 161 aa10.58□□□□□ -0.72
CHD1L-208ENST00000488864 C1orf122Q6ZSJ8 110 aa10.58□□□□□ -0.72
CHD1L-208ENST00000488864 BET1LQ9NYM9 111 aa10.58□□□□□ -0.72
CHD1L-208ENST00000488864 FOXA2Q9Y261 457 aaPredicted RBP10.58□□□□□ -0.72
CHD1L-208ENST00000488864 FAM181BA6NEQ2 426 aa10.57□□□□□ -0.72
CHD1L-208ENST00000488864 OR4F17Q8NGA8 305 aa10.57□□□□□ -0.72
CHD1L-208ENST00000488864 OR4S2Q8NH73 311 aa10.57□□□□□ -0.72
CHD1L-208ENST00000488864 MRPL20Q9BYC9 149 aaKnown RBP10.57□□□□□ -0.72
CHD1L-208ENST00000488864 MRPL27Q9P0M9 148 aaKnown RBP10.57□□□□□ -0.72
CHD1L-208ENST00000488864 HILPDAQ9Y5L2 63 aa10.57□□□□□ -0.72
CHD1L-208ENST00000488864 TRAV9-2A0A087WT02 112 aa10.57□□□□□ -0.72
CHD1L-208ENST00000488864 BUB1B-PAK6H3BSN5 160 aa10.57□□□□□ -0.72
CHD1L-208ENST00000488864 AVPP01185 164 aa10.57□□□□□ -0.72
CHD1L-208ENST00000488864 RPL8P62917 257 aaKnown RBP10.57□□□□□ -0.72
CHD1L-208ENST00000488864 LINC00311Q8N616 119 aa10.57□□□□□ -0.72
CHD1L-208ENST00000488864 ZNF738Q8NE65 137 aa10.57□□□□□ -0.72
CHD1L-208ENST00000488864 ZNF596Q8TC21 504 aa10.57□□□□□ -0.72
CHD1L-208ENST00000488864 OR51B2Q9Y5P1 312 aa10.57□□□□□ -0.72
CHD1L-208ENST00000488864 IGHV3-72A0A0B4J1Y9 119 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 A0A1W2PN81 502 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 IGLC7A0M8Q6 106 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 CT45A6P0DMU7 189 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 CT45A5P0DMU8 189 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 CT45A7P0DMV0 189 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 PMCHL1Q16048 86 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 ERASQ7Z444 233 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 OR11H6Q8NGC7 330 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 ST6GALNAC6Q969X2 333 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 SSBP4Q9BWG4 385 aaPredicted RBP10.56□□□□□ -0.72
CHD1L-208ENST00000488864 ZNF355PQ9NSJ1 428 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 TRAV40A0A0B4J280 105 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 M0R2Z0 102 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 HSBP1O75506 76 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 KIR2DS2P43631 304 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 MFAP2P55001 183 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 ZNF833PQ6ZTB9 187 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 C8orf31Q8N9H6 132 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 C22orf15Q8WYQ4 148 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 TNFRSF19Q9NS68 423 aa10.56□□□□□ -0.72
CHD1L-208ENST00000488864 CENPVL3A0A0U1RRI6 287 aa10.55□□□□□ -0.72
CHD1L-208ENST00000488864 C2orf70A6NJV1 201 aa10.55□□□□□ -0.72
CHD1L-208ENST00000488864 H0YJW9 148 aa10.55□□□□□ -0.72
CHD1L-208ENST00000488864 K7EP13 123 aa10.55□□□□□ -0.72
CHD1L-208ENST00000488864 HTR1DP28221 377 aa10.55□□□□□ -0.72
CHD1L-208ENST00000488864 RUSC1-AS1Q66K80 236 aa10.55□□□□□ -0.72
CHD1L-208ENST00000488864 RNASEKQ6P5S7 137 aaKnown RBP10.55□□□□□ -0.72
CHD1L-208ENST00000488864 BRD3OSQ6XYD6 125 aa10.55□□□□□ -0.72
CHD1L-208ENST00000488864 NUP35Q8NFH5 326 aa10.55□□□□□ -0.72
CHD1L-208ENST00000488864 RPEQ96AT9 228 aa10.55□□□□□ -0.72
CHD1L-208ENST00000488864 ALKBH7Q9BT30 221 aaPredicted RBP10.55□□□□□ -0.72
CHD1L-208ENST00000488864 A0A1W2PRE2 83 aa10.55□□□□□ -0.72
CHD1L-208ENST00000488864 ODF3BA8MYP8 253 aa10.55□□□□□ -0.72
CHD1L-208ENST00000488864 FBLN7Q53RD9 439 aa10.55□□□□□ -0.72
CHD1L-208ENST00000488864 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.55□□□□□ -0.72
CHD1L-208ENST00000488864 OR5B3Q8NH48 314 aa10.55□□□□□ -0.72
CHD1L-208ENST00000488864 WIPF2Q8TF74 440 aaPredicted RBP10.55□□□□□ -0.72
CHD1L-208ENST00000488864 FAM167A-AS1Q96KT0 104 aa10.55□□□□□ -0.72
CHD1L-208ENST00000488864 SLC25A33Q9BSK2 321 aa10.55□□□□□ -0.72
CHD1L-208ENST00000488864 SLC25A2Q9BXI2 301 aa10.55□□□□□ -0.72
CHD1L-208ENST00000488864 CLEC5AQ9NY25 188 aa10.55□□□□□ -0.72
CHD1L-208ENST00000488864 SH2D7A6NKC9 451 aaPredicted RBP10.54□□□□□ -0.72
CHD1L-208ENST00000488864 FNDC10F2Z333 226 aa10.54□□□□□ -0.72
CHD1L-208ENST00000488864 CORTO00230 105 aa10.54□□□□□ -0.72
CHD1L-208ENST00000488864 IGKV1-16P04430 117 aa10.54□□□□□ -0.72
CHD1L-208ENST00000488864 C8orf88P0DMB2 117 aa10.54□□□□□ -0.72
CHD1L-208ENST00000488864 IGHV4-38-2P0DP08 117 aa10.54□□□□□ -0.72
CHD1L-208ENST00000488864 UBE2G1P62253 170 aa10.54□□□□□ -0.72
CHD1L-208ENST00000488864 KLF5Q13887 457 aaPredicted RBP10.54□□□□□ -0.72
CHD1L-208ENST00000488864 PIP4P2Q8N4L2 257 aa10.54□□□□□ -0.72
CHD1L-208ENST00000488864 NUDT10Q8NFP7 164 aa10.54□□□□□ -0.72
CHD1L-208ENST00000488864 NUDT11Q96G61 164 aa10.54□□□□□ -0.72
CHD1L-208ENST00000488864 URB1-AS1Q96HZ7 61 aa10.54□□□□□ -0.72
CHD1L-208ENST00000488864 COMMD5Q9GZQ3 224 aa10.54□□□□□ -0.72
CHD1L-208ENST00000488864 SAA4P35542 130 aa10.54□□□□□ -0.72
CHD1L-208ENST00000488864 UBE2E1P51965 193 aa10.54□□□□□ -0.72
CHD1L-208ENST00000488864 ZNF137PP52743 207 aa10.54□□□□□ -0.72
CHD1L-208ENST00000488864 DYNAPQ8N1N2 210 aa10.54□□□□□ -0.72
CHD1L-208ENST00000488864 DPM3Q9P2X0 92 aa10.54□□□□□ -0.72
CHD1L-208ENST00000488864 TNCP24821 2201 aa10.54□□□□□ -0.72
CHD1L-208ENST00000488864 PYYP10082 97 aa10.53□□□□□ -0.72
CHD1L-208ENST00000488864 CD24P25063 80 aa10.53□□□□□ -0.72
CHD1L-208ENST00000488864 CAMPP49913 170 aa10.53□□□□□ -0.72
CHD1L-208ENST00000488864 TAS2R45P59539 299 aa10.53□□□□□ -0.72
CHD1L-208ENST00000488864 AMMECR1Q9Y4X0 333 aaPredicted RBP10.53□□□□□ -0.72
CHD1L-208ENST00000488864 SOX21Q9Y651 276 aaPredicted RBP10.53□□□□□ -0.72
CHD1L-208ENST00000488864 SRRM4A7MD48 611 aaKnown RBP10.53□□□□□ -0.72
CHD1L-208ENST00000488864 LY6LH3BQJ8 138 aa10.53□□□□□ -0.72
CHD1L-208ENST00000488864 M0QZ24 198 aa10.53□□□□□ -0.72
CHD1L-208ENST00000488864 CDKN1BP46527 198 aa10.53□□□□□ -0.72
CHD1L-208ENST00000488864 UBE2L3P68036 154 aaKnown RBP10.53□□□□□ -0.72
CHD1L-208ENST00000488864 SSBP2P81877 361 aaPredicted RBP10.53□□□□□ -0.72
CHD1L-208ENST00000488864 PRR27Q6MZM9 219 aa10.53□□□□□ -0.72
CHD1L-208ENST00000488864 OR10W1Q8NGF6 305 aa10.53□□□□□ -0.72
CHD1L-208ENST00000488864 GRAMD2BQ96HH9 432 aa10.53□□□□□ -0.72
CHD1L-208ENST00000488864 IGHV1-3A0A0C4DH29 117 aa10.52□□□□□ -0.73
CHD1L-208ENST00000488864 TEX50A0A1B0GTY4 177 aa10.52□□□□□ -0.73
CHD1L-208ENST00000488864 PSMB11A5LHX3 300 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms