RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 FAM25GB3EWG6 89 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 H7BYZ3 331 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 CD3DP04234 171 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 AKR1C4P17516 323 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 AZU1P20160 251 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 CDKN1BP46527 198 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 CCR6P51684 374 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 XGP55808 180 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 FGL1Q08830 312 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 OR2F1Q13607 317 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 SURF2Q15527 256 aaPredicted RBP4.5□□□□□ -1.69
PTCH1-211ENST00000488809 ESRGQ1W209 222 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 Q6ZSN1 163 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 SELENOHQ8IZQ5 122 aaKnown RBP4.5□□□□□ -1.69
PTCH1-211ENST00000488809 BPIFCQ8NFQ6 507 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 MARCH1Q8TCQ1 289 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 GLYATL2Q8WU03 294 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 TMEM170AQ8WVE7 144 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 IL22RA2Q969J5 263 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 C17orf77Q96MU5 243 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 TMEM147Q9BVK8 224 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 SLC25A32Q9H2D1 315 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 VCX3AQ9NNX9 186 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 RNF24Q9Y225 148 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 KCNIP3Q9Y2W7 256 aa4.5□□□□□ -1.69
PTCH1-211ENST00000488809 FLG2Q5D862 2391 aaPredicted RBP4.49□□□□□ -1.69
PTCH1-211ENST00000488809 IGKV1D-37A0A075B6S9 117 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 TRAV9-2A0A087WT02 112 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 A0A0J9YY99 117 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 DISC1C4P0D8 188 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 ZNF701M0R085 212 aaPredicted RBP4.49□□□□□ -1.69
PTCH1-211ENST00000488809 SIVA1O15304 175 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 RAB3DO95716 219 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 PRM2P04554 102 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 RPL7P18124 248 aaKnown RBP4.49□□□□□ -1.69
PTCH1-211ENST00000488809 ELK1P19419 428 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 RAP2BP61225 183 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 RPP30P78346 268 aaKnown RBP4.49□□□□□ -1.69
PTCH1-211ENST00000488809 HIST1H1AQ02539 215 aaPredicted RBP4.49□□□□□ -1.69
PTCH1-211ENST00000488809 SMCO1Q147U7 214 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 MEF2DQ14814 521 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 STEAP1BQ6NZ63 245 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 MZT2AQ6P582 158 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 TMEM229BQ8NBD8 167 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 OR8A1Q8NGG7 326 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 OR1S1Q8NH92 325 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 LHFPL5Q8TAF8 219 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 LRRC20Q8TCA0 184 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 RNASE8Q8TDE3 154 aaKnown RBP4.49□□□□□ -1.69
PTCH1-211ENST00000488809 AP3S1Q92572 193 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 SLC25A39Q9BZJ4 359 aaPredicted RBP4.49□□□□□ -1.69
PTCH1-211ENST00000488809 HSPB7Q9UBY9 170 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 MTFP1Q9UDX5 166 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 TMEM56-RWDD3S4R434 201 aa4.49□□□□□ -1.69
PTCH1-211ENST00000488809 A0A0B4J2A0 478 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 GAGE12BA1L429 117 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 CRYM-AS1A6NIL9 109 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 K7EP13 123 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 HPGDSO60760 199 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 GAGE7O76087 117 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 GAGE12FP0CL80 117 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 GAGE12GP0CL81 117 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 GAGE12IP0CL82 117 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 ANXA3P12429 323 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 ORM2P19652 201 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 TGFBR1P36897 503 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 LSM3P62310 102 aaKnown RBP4.48□□□□□ -1.69
PTCH1-211ENST00000488809 SRPXP78539 464 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 SSBP1Q04837 148 aaKnown RBP4.48□□□□□ -1.69
PTCH1-211ENST00000488809 Q6ZRN7 208 aaPredicted RBP4.48□□□□□ -1.69
PTCH1-211ENST00000488809 THAP8Q8NA92 274 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 SYT8Q8NBV8 401 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 OR52I2Q8NH67 350 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 SCGB3A2Q96PL1 93 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 RBKSQ9H477 322 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 SHPKQ9UHJ6 478 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 PAIP2BQ9ULR5 123 aaKnown RBP4.48□□□□□ -1.69
PTCH1-211ENST00000488809 FAT1Q14517 4588 aa4.48□□□□□ -1.69
PTCH1-211ENST00000488809 SRRM2Q9UQ35 2752 aaKnown RBP4.47□□□□□ -1.69
PTCH1-211ENST00000488809 A0A087WTM6 91 aa4.47□□□□□ -1.69
PTCH1-211ENST00000488809 A0A096LPF7 62 aa4.47□□□□□ -1.69
PTCH1-211ENST00000488809 ANKRD65E5RJM6 399 aa4.47□□□□□ -1.69
PTCH1-211ENST00000488809 MED6O75586 246 aa4.47□□□□□ -1.69
PTCH1-211ENST00000488809 SMR3BP02814 79 aaPredicted RBP4.47□□□□□ -1.69
PTCH1-211ENST00000488809 GCSHP23434 173 aa4.47□□□□□ -1.69
PTCH1-211ENST00000488809 MRPS10P82664 201 aaKnown RBP4.47□□□□□ -1.69
PTCH1-211ENST00000488809 AKR1C1Q04828 323 aa4.47□□□□□ -1.69
PTCH1-211ENST00000488809 PSG3Q16557 428 aa4.47□□□□□ -1.69
PTCH1-211ENST00000488809 SERTAD4-AS1Q5TG53 156 aa4.47□□□□□ -1.69
PTCH1-211ENST00000488809 RNF182Q8N6D2 247 aa4.47□□□□□ -1.69
PTCH1-211ENST00000488809 LINC00612Q8N6U2 182 aa4.47□□□□□ -1.69
PTCH1-211ENST00000488809 OR4D10Q8NGI6 311 aa4.47□□□□□ -1.69
PTCH1-211ENST00000488809 CIB3Q96Q77 187 aaPredicted RBP4.47□□□□□ -1.69
PTCH1-211ENST00000488809 PRRT1Q99946 306 aa4.47□□□□□ -1.69
PTCH1-211ENST00000488809 RTBDNQ9BSG5 229 aaPredicted RBP4.47□□□□□ -1.69
PTCH1-211ENST00000488809 EXTL2Q9UBQ6 330 aa4.47□□□□□ -1.69
PTCH1-211ENST00000488809 TRGV2A0A075B6R0 118 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 IGKV1OR2-108A0A075B7D4 117 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 A0A087X0K7 114 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms