RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CITED2Q99967 270 aaPredicted RBP15.03■□□□□ -0
CCM2-216ENST00000488727 LY96Q9Y6Y9 160 aa15.03■□□□□ -0
CCM2-216ENST00000488727 TCRBV4S1A1TA0A5B7 111 aa15.02□□□□□ -0.01
CCM2-216ENST00000488727 C9JCJ5 164 aa15.02□□□□□ -0.01
CCM2-216ENST00000488727 GGCTO75223 188 aaKnown RBP15.02□□□□□ -0.01
CCM2-216ENST00000488727 RPLP1P05386 114 aaKnown RBP15.02□□□□□ -0.01
CCM2-216ENST00000488727 REG1AP05451 166 aa15.02□□□□□ -0.01
CCM2-216ENST00000488727 CRYGCP07315 174 aa15.02□□□□□ -0.01
CCM2-216ENST00000488727 ELANEP08246 267 aa15.02□□□□□ -0.01
CCM2-216ENST00000488727 ETFRF1Q6IPR1 90 aa15.02□□□□□ -0.01
CCM2-216ENST00000488727 RNF152Q8N8N0 203 aa15.02□□□□□ -0.01
CCM2-216ENST00000488727 ZNF503Q96F45 646 aa15.02□□□□□ -0.01
CCM2-216ENST00000488727 ACY3Q96HD9 319 aa15.02□□□□□ -0.01
CCM2-216ENST00000488727 IMMP2LQ96T52 175 aa15.02□□□□□ -0.01
CCM2-216ENST00000488727 C8orf88P0DMB2 117 aa15.01□□□□□ -0.01
CCM2-216ENST00000488727 PF4V1P10720 104 aa15.01□□□□□ -0.01
CCM2-216ENST00000488727 GATA2P23769 480 aaPredicted RBP15.01□□□□□ -0.01
CCM2-216ENST00000488727 SELENOTP62341 195 aa15.01□□□□□ -0.01
CCM2-216ENST00000488727 TRBV20OR9-2A0A075B6H5 130 aa15□□□□□ -0.01
CCM2-216ENST00000488727 IGKV1D-37A0A075B6S9 117 aa15□□□□□ -0.01
CCM2-216ENST00000488727 NPIPB5A8MRT5 1133 aa15□□□□□ -0.01
CCM2-216ENST00000488727 TYMSP04818 313 aa15□□□□□ -0.01
CCM2-216ENST00000488727 SHISA2Q6UWI4 295 aa15□□□□□ -0.01
CCM2-216ENST00000488727 OR1L4Q8NGR5 311 aa15□□□□□ -0.01
CCM2-216ENST00000488727 TMEM37Q8WXS4 190 aa15□□□□□ -0.01
CCM2-216ENST00000488727 MS4A10Q96PG2 267 aa15□□□□□ -0.01
CCM2-216ENST00000488727 PFDN5Q99471 154 aa15□□□□□ -0.01
CCM2-216ENST00000488727 SRSF8Q9BRL6 282 aaKnown RBP15□□□□□ -0.01
CCM2-216ENST00000488727 CDX1P47902 265 aaPredicted RBP15□□□□□ -0.01
CCM2-216ENST00000488727 RAB9AP51151 201 aa15□□□□□ -0.01
CCM2-216ENST00000488727 KCNIP4Q6PIL6 250 aa15□□□□□ -0.01
CCM2-216ENST00000488727 NECAP1Q8NC96 275 aa15□□□□□ -0.01
CCM2-216ENST00000488727 SPATA3Q8NHX4 192 aa15□□□□□ -0.01
CCM2-216ENST00000488727 MYOZ3Q8TDC0 251 aa15□□□□□ -0.01
CCM2-216ENST00000488727 FRZBQ92765 325 aa15□□□□□ -0.01
CCM2-216ENST00000488727 BTF3L4Q96K17 158 aa15□□□□□ -0.01
CCM2-216ENST00000488727 ELOVL1Q9BW60 279 aa15□□□□□ -0.01
CCM2-216ENST00000488727 ADARB2-AS1A8MUL3 147 aa14.99□□□□□ -0.01
CCM2-216ENST00000488727 CORTO00230 105 aa14.99□□□□□ -0.01
CCM2-216ENST00000488727 TRGC1P0CF51 173 aa14.99□□□□□ -0.01
CCM2-216ENST00000488727 NDUFA6P56556 154 aa14.99□□□□□ -0.01
CCM2-216ENST00000488727 NPIPB3Q92617 1050 aa14.99□□□□□ -0.01
CCM2-216ENST00000488727 FAM167A-AS1Q96KT0 104 aa14.99□□□□□ -0.01
CCM2-216ENST00000488727 DNAJC4Q9NNZ3 241 aa14.99□□□□□ -0.01
CCM2-216ENST00000488727 ZNF355PQ9NSJ1 428 aa14.99□□□□□ -0.01
CCM2-216ENST00000488727 ELOA3CA0A087WX78 387 aaPredicted RBP14.98□□□□□ -0.01
CCM2-216ENST00000488727 A0A1W2PRE2 83 aa14.98□□□□□ -0.01
CCM2-216ENST00000488727 KHDC1LQ5JSQ8 128 aa14.98□□□□□ -0.01
CCM2-216ENST00000488727 OR1P1Q8NH06 330 aa14.98□□□□□ -0.01
CCM2-216ENST00000488727 SFRP2Q96HF1 295 aa14.98□□□□□ -0.01
CCM2-216ENST00000488727 SLC25A2Q9BXI2 301 aa14.98□□□□□ -0.01
CCM2-216ENST00000488727 ANK2Q01484 3957 aa14.98□□□□□ -0.01
CCM2-216ENST00000488727 PPP5D1E7EU14 171 aa14.97□□□□□ -0.01
CCM2-216ENST00000488727 H3BUA1 57 aa14.97□□□□□ -0.01
CCM2-216ENST00000488727 OR7C2O60412 319 aa14.97□□□□□ -0.01
CCM2-216ENST00000488727 S100A9P06702 114 aaKnown RBP14.97□□□□□ -0.01
CCM2-216ENST00000488727 FAM3BP58499 235 aaPredicted RBP14.97□□□□□ -0.01
CCM2-216ENST00000488727 C18orf65Q6ZTR6 163 aa14.97□□□□□ -0.01
CCM2-216ENST00000488727 TRGV9Q99603 122 aa14.97□□□□□ -0.01
CCM2-216ENST00000488727 DMRT1Q9Y5R6 373 aa14.97□□□□□ -0.01
CCM2-216ENST00000488727 A0A1W2PRX2 142 aa14.97□□□□□ -0.01
CCM2-216ENST00000488727 COX7A2P2O60397 106 aa14.97□□□□□ -0.01
CCM2-216ENST00000488727 BRI3O95415 125 aa14.97□□□□□ -0.01
CCM2-216ENST00000488727 TRGV3P03979 118 aa14.97□□□□□ -0.01
CCM2-216ENST00000488727 MFAP2P55001 183 aa14.97□□□□□ -0.01
CCM2-216ENST00000488727 TPPP2P59282 170 aa14.97□□□□□ -0.01
CCM2-216ENST00000488727 FANCD2OSQ96PS1 177 aa14.97□□□□□ -0.01
CCM2-216ENST00000488727 MRPL36Q9P0J6 103 aaKnown RBP14.97□□□□□ -0.01
CCM2-216ENST00000488727 TSSC4Q9Y5U2 329 aaPredicted RBP14.97□□□□□ -0.01
CCM2-216ENST00000488727 NDUFA11Q86Y39 141 aa14.96□□□□□ -0.01
CCM2-216ENST00000488727 ZNF491Q8N8L2 437 aa14.96□□□□□ -0.01
CCM2-216ENST00000488727 TMEM116Q8NCL8 245 aa14.96□□□□□ -0.01
CCM2-216ENST00000488727 OR4X1Q8NH49 305 aa14.96□□□□□ -0.01
CCM2-216ENST00000488727 OCC1Q8TAD7 63 aa14.96□□□□□ -0.01
CCM2-216ENST00000488727 F11RQ9Y624 299 aaKnown RBP14.96□□□□□ -0.01
CCM2-216ENST00000488727 DNHD1Q96M86 4753 aa14.96□□□□□ -0.01
CCM2-216ENST00000488727 TRBV9A0A0B4J1U6 114 aa14.95□□□□□ -0.02
CCM2-216ENST00000488727 A0A1W2PPQ1 181 aa14.95□□□□□ -0.02
CCM2-216ENST00000488727 PGPEP1LA6NFU8 196 aa14.95□□□□□ -0.02
CCM2-216ENST00000488727 NSUN5P1Q3KNT7 163 aa14.95□□□□□ -0.02
CCM2-216ENST00000488727 C10orf113Q5VZT2 155 aa14.95□□□□□ -0.02
CCM2-216ENST00000488727 IGLV11-55A0A075B6I3 123 aa14.95□□□□□ -0.02
CCM2-216ENST00000488727 KLK9Q2XQG4 91 aa14.95□□□□□ -0.02
CCM2-216ENST00000488727 PATE2Q6UY27 113 aa14.95□□□□□ -0.02
CCM2-216ENST00000488727 MISP3Q96FF7 219 aa14.95□□□□□ -0.02
CCM2-216ENST00000488727 GNB4Q9HAV0 340 aa14.95□□□□□ -0.02
CCM2-216ENST00000488727 KLK9Q9UKQ9 250 aa14.95□□□□□ -0.02
CCM2-216ENST00000488727 GGTLC3B5MD39 225 aa14.94□□□□□ -0.02
CCM2-216ENST00000488727 RHOGP84095 191 aa14.94□□□□□ -0.02
CCM2-216ENST00000488727 ZNF90Q03938 601 aa14.94□□□□□ -0.02
CCM2-216ENST00000488727 MORN5Q5VZ52 161 aa14.94□□□□□ -0.02
CCM2-216ENST00000488727 OR10G8Q8NGN5 311 aa14.94□□□□□ -0.02
CCM2-216ENST00000488727 UBE2E2Q96LR5 201 aa14.94□□□□□ -0.02
CCM2-216ENST00000488727 TRAV9-1A0A075B6T8 112 aa14.93□□□□□ -0.02
CCM2-216ENST00000488727 IFITM10A6NMD0 228 aa14.93□□□□□ -0.02
CCM2-216ENST00000488727 OR2J3O76001 311 aa14.93□□□□□ -0.02
CCM2-216ENST00000488727 UBE2L3P68036 154 aaKnown RBP14.93□□□□□ -0.02
CCM2-216ENST00000488727 ACTL10Q5JWF8 245 aa14.93□□□□□ -0.02
CCM2-216ENST00000488727 KLHL30-AS1Q8NEE0 82 aa14.93□□□□□ -0.02
CCM2-216ENST00000488727 AURKAIP1Q9NWT8 199 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms