RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 SHANK2-AS3Q9BTD1 123 aa16.61■□□□□ 0.25
CUL4A-209ENST00000488558 SCRT1Q9BWW7 348 aa16.61■□□□□ 0.25
CUL4A-209ENST00000488558 SLC25A39Q9BZJ4 359 aaPredicted RBP16.61■□□□□ 0.25
CUL4A-209ENST00000488558 NPVFQ9HCQ7 196 aa16.61■□□□□ 0.25
CUL4A-209ENST00000488558 HIGD1AQ9Y241 93 aa16.61■□□□□ 0.25
CUL4A-209ENST00000488558 HYPMO75409 117 aa16.6■□□□□ 0.25
CUL4A-209ENST00000488558 CCNKO75909 580 aa16.6■□□□□ 0.25
CUL4A-209ENST00000488558 C12orf74Q32Q52 190 aa16.6■□□□□ 0.25
CUL4A-209ENST00000488558 S100A7AQ86SG5 101 aa16.6■□□□□ 0.25
CUL4A-209ENST00000488558 C20orf173Q96LM9 149 aa16.6■□□□□ 0.25
CUL4A-209ENST00000488558 SLC35B3Q9H1N7 401 aa16.6■□□□□ 0.25
CUL4A-209ENST00000488558 DOK5Q9P104 306 aa16.6■□□□□ 0.25
CUL4A-209ENST00000488558 MGAT4CQ9UBM8 478 aa16.6■□□□□ 0.25
CUL4A-209ENST00000488558 F6UB75 175 aa16.59■□□□□ 0.25
CUL4A-209ENST00000488558 DEDDO75618 318 aa16.59■□□□□ 0.25
CUL4A-209ENST00000488558 RPL7P18124 248 aaKnown RBP16.59■□□□□ 0.25
CUL4A-209ENST00000488558 RRAS2P62070 204 aaPredicted RBP16.59■□□□□ 0.25
CUL4A-209ENST00000488558 TEPPQ6URK8 271 aa16.59■□□□□ 0.25
CUL4A-209ENST00000488558 CCDC32Q9BV29 185 aa16.59■□□□□ 0.25
CUL4A-209ENST00000488558 RNF126Q9BV68 326 aa16.59■□□□□ 0.25
CUL4A-209ENST00000488558 GGACTQ9BVM4 153 aa16.59■□□□□ 0.25
CUL4A-209ENST00000488558 GSKIPQ9P0R6 139 aa16.59■□□□□ 0.25
CUL4A-209ENST00000488558 AMBPP02760 352 aa16.58■□□□□ 0.24
CUL4A-209ENST00000488558 TCRBP04435 133 aa16.58■□□□□ 0.24
CUL4A-209ENST00000488558 FXYD7P58549 80 aa16.58■□□□□ 0.24
CUL4A-209ENST00000488558 GSG1LQ6UXU4 331 aa16.58■□□□□ 0.24
CUL4A-209ENST00000488558 LINC00299Q6ZSB3 139 aa16.58■□□□□ 0.24
CUL4A-209ENST00000488558 RNF24Q9Y225 148 aa16.58■□□□□ 0.24
CUL4A-209ENST00000488558 GOLT1BQ9Y3E0 138 aa16.58■□□□□ 0.24
CUL4A-209ENST00000488558 RFNGQ9Y644 331 aa16.58■□□□□ 0.24
CUL4A-209ENST00000488558 IGHV4-4A0A075B6R2 117 aa16.57■□□□□ 0.24
CUL4A-209ENST00000488558 TEX48A0A1B0GUV7 120 aa16.57■□□□□ 0.24
CUL4A-209ENST00000488558 C7orf66A4D0T2 115 aa16.57■□□□□ 0.24
CUL4A-209ENST00000488558 MBPP02686 304 aaPredicted RBP16.57■□□□□ 0.24
CUL4A-209ENST00000488558 PXDC1Q5TGL8 231 aa16.57■□□□□ 0.24
CUL4A-209ENST00000488558 DNAH6Q9C0G6 4158 aa16.56■□□□□ 0.24
CUL4A-209ENST00000488558 DEFB131BA0A096LNP1 70 aa16.56■□□□□ 0.24
CUL4A-209ENST00000488558 DUSP14O95147 198 aaKnown RBP16.56■□□□□ 0.24
CUL4A-209ENST00000488558 OR5G3P0C626 314 aa16.56■□□□□ 0.24
CUL4A-209ENST00000488558 SPART-AS1P0CW21 52 aa16.56■□□□□ 0.24
CUL4A-209ENST00000488558 ZNF846Q147U1 533 aa16.56■□□□□ 0.24
CUL4A-209ENST00000488558 AMTNQ6UX39 209 aa16.56■□□□□ 0.24
CUL4A-209ENST00000488558 ZNF546Q86UE3 836 aa16.56■□□□□ 0.24
CUL4A-209ENST00000488558 NUDT15Q9NV35 164 aa16.56■□□□□ 0.24
CUL4A-209ENST00000488558 IGHV3OR16-12A0A075B7B8 117 aa16.55■□□□□ 0.24
CUL4A-209ENST00000488558 A0A087X0K7 114 aa16.55■□□□□ 0.24
CUL4A-209ENST00000488558 TRAV8-2A0A0B4J237 113 aa16.55■□□□□ 0.24
CUL4A-209ENST00000488558 SLC38A11Q08AI6 406 aa16.55■□□□□ 0.24
CUL4A-209ENST00000488558 ZNF431Q8TF32 576 aaPredicted RBP16.55■□□□□ 0.24
CUL4A-209ENST00000488558 TRAV6A0A075B6T7 132 aa16.54■□□□□ 0.24
CUL4A-209ENST00000488558 CCSO14618 274 aa16.54■□□□□ 0.24
CUL4A-209ENST00000488558 PRR20EP86478 221 aa16.54■□□□□ 0.24
CUL4A-209ENST00000488558 PRR20CP86479 221 aa16.54■□□□□ 0.24
CUL4A-209ENST00000488558 PRR20DP86480 221 aa16.54■□□□□ 0.24
CUL4A-209ENST00000488558 PRR20BP86481 221 aa16.54■□□□□ 0.24
CUL4A-209ENST00000488558 PRR20AP86496 221 aa16.54■□□□□ 0.24
CUL4A-209ENST00000488558 ARL16Q0P5N6 197 aa16.54■□□□□ 0.24
CUL4A-209ENST00000488558 ZNF767PQ75MW2 155 aa16.54■□□□□ 0.24
CUL4A-209ENST00000488558 C1orf158Q8N1D5 194 aa16.54■□□□□ 0.24
CUL4A-209ENST00000488558 IGF2BP2-AS1Q96M15 143 aa16.54■□□□□ 0.24
CUL4A-209ENST00000488558 UHRF2Q96PU4 802 aa16.54■□□□□ 0.24
CUL4A-209ENST00000488558 ARL6Q9H0F7 186 aa16.54■□□□□ 0.24
CUL4A-209ENST00000488558 FRAS1Q86XX4 4008 aa16.54■□□□□ 0.24
CUL4A-209ENST00000488558 DNAH10Q8IVF4 4471 aa16.53■□□□□ 0.24
CUL4A-209ENST00000488558 L7N2F9 121 aa16.53■□□□□ 0.24
CUL4A-209ENST00000488558 HBE1P02100 147 aa16.53■□□□□ 0.24
CUL4A-209ENST00000488558 CNN1P51911 297 aaKnown RBP16.53■□□□□ 0.24
CUL4A-209ENST00000488558 VAMP2P63027 116 aa16.53■□□□□ 0.24
CUL4A-209ENST00000488558 ARV1Q9H2C2 271 aa16.53■□□□□ 0.24
CUL4A-209ENST00000488558 GOSR2O14653 212 aa16.52■□□□□ 0.24
CUL4A-209ENST00000488558 AGPAT2O15120 278 aa16.52■□□□□ 0.24
CUL4A-209ENST00000488558 FGL1Q08830 312 aa16.52■□□□□ 0.24
CUL4A-209ENST00000488558 PATE2Q6UY27 113 aa16.52■□□□□ 0.24
CUL4A-209ENST00000488558 OR11H7Q8NGC8 314 aa16.52■□□□□ 0.24
CUL4A-209ENST00000488558 SEC22CQ9BRL7 303 aa16.52■□□□□ 0.24
CUL4A-209ENST00000488558 DKK2Q9UBU2 259 aa16.52■□□□□ 0.24
CUL4A-209ENST00000488558 CXCL2P19875 107 aa16.51■□□□□ 0.23
CUL4A-209ENST00000488558 C12orf45Q8N5I9 185 aaPredicted RBP16.51■□□□□ 0.23
CUL4A-209ENST00000488558 RNF182Q8N6D2 247 aa16.51■□□□□ 0.23
CUL4A-209ENST00000488558 ZNF738Q8NE65 137 aa16.51■□□□□ 0.23
CUL4A-209ENST00000488558 C11orf1Q9H5F2 150 aa16.51■□□□□ 0.23
CUL4A-209ENST00000488558 LOC102723971A0A1B0GUV8 181 aa16.5■□□□□ 0.23
CUL4A-209ENST00000488558 FAM25EA8MYX2 175 aa16.5■□□□□ 0.23
CUL4A-209ENST00000488558 MRPS12O15235 138 aaKnown RBP16.5■□□□□ 0.23
CUL4A-209ENST00000488558 H2AFB2P0C5Z0 115 aa16.5■□□□□ 0.23
CUL4A-209ENST00000488558 CXCL3P19876 107 aa16.5■□□□□ 0.23
CUL4A-209ENST00000488558 EMP1P54849 157 aa16.5■□□□□ 0.23
CUL4A-209ENST00000488558 OXA1LQ15070 435 aa16.5■□□□□ 0.23
CUL4A-209ENST00000488558 RRN3P1Q2M238 152 aa16.5■□□□□ 0.23
CUL4A-209ENST00000488558 IGFL4Q6B9Z1 124 aa16.5■□□□□ 0.23
CUL4A-209ENST00000488558 C2orf50Q96LR7 162 aa16.5■□□□□ 0.23
CUL4A-209ENST00000488558 NDUFAF3Q9BU61 184 aa16.5■□□□□ 0.23
CUL4A-209ENST00000488558 C5orf51A6NDU8 294 aa16.49■□□□□ 0.23
CUL4A-209ENST00000488558 INSP01308 110 aa16.49■□□□□ 0.23
CUL4A-209ENST00000488558 FAM222AQ5U5X8 452 aa16.49■□□□□ 0.23
CUL4A-209ENST00000488558 S100ZQ8WXG8 99 aa16.49■□□□□ 0.23
CUL4A-209ENST00000488558 FAM210BQ96KR6 192 aa16.49■□□□□ 0.23
CUL4A-209ENST00000488558 MGST2Q99735 147 aa16.49■□□□□ 0.23
CUL4A-209ENST00000488558 LSM5Q9Y4Y9 91 aaKnown RBP16.49■□□□□ 0.23
CUL4A-209ENST00000488558 FAM240BA0A1B0GVZ2 78 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms