RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 FRMD6-AS1P0C7T7 363 aa8.22□□□□□ -1.09
UBE4B-210ENST00000488228 ZNF688P0C7X2 276 aa8.22□□□□□ -1.09
UBE4B-210ENST00000488228 PAFAH1B2P68402 229 aa8.22□□□□□ -1.09
UBE4B-210ENST00000488228 SPATA31B1PQ5VZV4 182 aa8.22□□□□□ -1.09
UBE4B-210ENST00000488228 Q6ZRG5 221 aa8.22□□□□□ -1.09
UBE4B-210ENST00000488228 APRG1Q8IVJ8 170 aa8.22□□□□□ -1.09
UBE4B-210ENST00000488228 HSD17B11Q8NBQ5 300 aa8.22□□□□□ -1.09
UBE4B-210ENST00000488228 SCGB1C1Q8TD33 95 aa8.22□□□□□ -1.09
UBE4B-210ENST00000488228 CITED4Q96RK1 184 aa8.22□□□□□ -1.09
UBE4B-210ENST00000488228 HUWE1Q7Z6Z7 4374 aaKnown RBP8.22□□□□□ -1.09
UBE4B-210ENST00000488228 TRAV2A0A0B4J234 112 aa8.21□□□□□ -1.1
UBE4B-210ENST00000488228 TRAV5A0A0B4J249 113 aa8.21□□□□□ -1.1
UBE4B-210ENST00000488228 C17orf112F2Z3M2 114 aa8.21□□□□□ -1.1
UBE4B-210ENST00000488228 GALR1P47211 349 aa8.21□□□□□ -1.1
UBE4B-210ENST00000488228 CD300CQ08708 224 aa8.21□□□□□ -1.1
UBE4B-210ENST00000488228 ZNF266Q14584 549 aa8.21□□□□□ -1.1
UBE4B-210ENST00000488228 FFAR4Q5NUL3 377 aa8.21□□□□□ -1.1
UBE4B-210ENST00000488228 RPL7L1Q6DKI1 246 aaKnown RBP8.21□□□□□ -1.1
UBE4B-210ENST00000488228 AKAP14Q86UN6 197 aa8.21□□□□□ -1.1
UBE4B-210ENST00000488228 OR1L4Q8NGR5 311 aa8.21□□□□□ -1.1
UBE4B-210ENST00000488228 C17orf77Q96MU5 243 aa8.21□□□□□ -1.1
UBE4B-210ENST00000488228 PFDN5Q99471 154 aa8.21□□□□□ -1.1
UBE4B-210ENST00000488228 PARD6GQ9BYG4 376 aaPredicted RBP8.21□□□□□ -1.1
UBE4B-210ENST00000488228 MFFQ9GZY8 342 aa8.21□□□□□ -1.1
UBE4B-210ENST00000488228 SH3BGRL3Q9H299 93 aa8.21□□□□□ -1.1
UBE4B-210ENST00000488228 STAB2Q8WWQ8 2551 aa8.2□□□□□ -1.1
UBE4B-210ENST00000488228 ELOA3CA0A087WX78 387 aaPredicted RBP8.2□□□□□ -1.1
UBE4B-210ENST00000488228 H3BTX0 84 aa8.2□□□□□ -1.1
UBE4B-210ENST00000488228 SOCS3O14543 225 aa8.2□□□□□ -1.1
UBE4B-210ENST00000488228 SNRPCP09234 159 aaKnown RBP8.2□□□□□ -1.1
UBE4B-210ENST00000488228 RPL7P18124 248 aaKnown RBP8.2□□□□□ -1.1
UBE4B-210ENST00000488228 ATF4P18848 351 aaPredicted RBP8.2□□□□□ -1.1
UBE4B-210ENST00000488228 S100A7P31151 101 aa8.2□□□□□ -1.1
UBE4B-210ENST00000488228 DEFB131AP59861 70 aa8.2□□□□□ -1.1
UBE4B-210ENST00000488228 PSMG4Q5JS54 123 aa8.2□□□□□ -1.1
UBE4B-210ENST00000488228 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.2□□□□□ -1.1
UBE4B-210ENST00000488228 TCTE3Q8IZS6 198 aa8.2□□□□□ -1.1
UBE4B-210ENST00000488228 ASCL2Q99929 193 aa8.2□□□□□ -1.1
UBE4B-210ENST00000488228 TUBA4BQ9H853 241 aa8.2□□□□□ -1.1
UBE4B-210ENST00000488228 DNAJC4Q9NNZ3 241 aa8.2□□□□□ -1.1
UBE4B-210ENST00000488228 NBEAL2Q6ZNJ1 2754 aa8.19□□□□□ -1.1
UBE4B-210ENST00000488228 RBMY1BA6NDE4 496 aaKnown RBP8.19□□□□□ -1.1
UBE4B-210ENST00000488228 RBMY1EA6NEQ0 496 aaKnown RBP8.19□□□□□ -1.1
UBE4B-210ENST00000488228 MRPS12O15235 138 aaKnown RBP8.19□□□□□ -1.1
UBE4B-210ENST00000488228 EIF3GO75821 320 aaKnown RBP eCLIP8.19□□□□□ -1.1
UBE4B-210ENST00000488228 RBMY1DP0C7P1 496 aaKnown RBP8.19□□□□□ -1.1
UBE4B-210ENST00000488228 CXCL2P19875 107 aa8.19□□□□□ -1.1
UBE4B-210ENST00000488228 ATP6V0CP27449 155 aa8.19□□□□□ -1.1
UBE4B-210ENST00000488228 DEFB1P60022 68 aa8.19□□□□□ -1.1
UBE4B-210ENST00000488228 RAB2AP61019 212 aa8.19□□□□□ -1.1
UBE4B-210ENST00000488228 ZNF345Q14585 488 aa8.19□□□□□ -1.1
UBE4B-210ENST00000488228 FAM78BQ5VT40 261 aa8.19□□□□□ -1.1
UBE4B-210ENST00000488228 MIR17HGQ75NE6 70 aa8.19□□□□□ -1.1
UBE4B-210ENST00000488228 S100A7AQ86SG5 101 aa8.19□□□□□ -1.1
UBE4B-210ENST00000488228 GATAD1Q8WUU5 269 aa8.19□□□□□ -1.1
UBE4B-210ENST00000488228 GPR82Q96P67 336 aa8.19□□□□□ -1.1
UBE4B-210ENST00000488228 B9D2Q9BPU9 175 aa8.19□□□□□ -1.1
UBE4B-210ENST00000488228 SEPSECSQ9HD40 501 aaKnown RBP8.19□□□□□ -1.1
UBE4B-210ENST00000488228 A0A087X0K7 114 aa8.18□□□□□ -1.1
UBE4B-210ENST00000488228 BORCS7-ASMTA0A0B4J1R7 106 aa8.18□□□□□ -1.1
UBE4B-210ENST00000488228 KNCNA6PVL3 124 aa8.18□□□□□ -1.1
UBE4B-210ENST00000488228 HMSDA8MTL9 139 aa8.18□□□□□ -1.1
UBE4B-210ENST00000488228 A8MZ25 164 aa8.18□□□□□ -1.1
UBE4B-210ENST00000488228 SLC17A3O00476 420 aa8.18□□□□□ -1.1
UBE4B-210ENST00000488228 RPL35AP18077 110 aaKnown RBP8.18□□□□□ -1.1
UBE4B-210ENST00000488228 PSMB3P49720 205 aa8.18□□□□□ -1.1
UBE4B-210ENST00000488228 IGFL4Q6B9Z1 124 aa8.18□□□□□ -1.1
UBE4B-210ENST00000488228 KCNRGQ8N5I3 272 aa8.18□□□□□ -1.1
UBE4B-210ENST00000488228 RNF182Q8N6D2 247 aa8.18□□□□□ -1.1
UBE4B-210ENST00000488228 C20orf173Q96LM9 149 aa8.18□□□□□ -1.1
UBE4B-210ENST00000488228 FAM110AQ9BQ89 295 aa8.18□□□□□ -1.1
UBE4B-210ENST00000488228 SLC25A2Q9BXI2 301 aa8.18□□□□□ -1.1
UBE4B-210ENST00000488228 CYTL1Q9NRR1 136 aa8.18□□□□□ -1.1
UBE4B-210ENST00000488228 TIMM9Q9Y5J7 89 aa8.18□□□□□ -1.1
UBE4B-210ENST00000488228 TRAV8-2A0A0B4J237 113 aa8.17□□□□□ -1.1
UBE4B-210ENST00000488228 H3BQ15 152 aa8.17□□□□□ -1.1
UBE4B-210ENST00000488228 BCL2L11O43521 198 aa8.17□□□□□ -1.1
UBE4B-210ENST00000488228 IGLC2P0DOY2 106 aa8.17□□□□□ -1.1
UBE4B-210ENST00000488228 PYYP10082 97 aa8.17□□□□□ -1.1
UBE4B-210ENST00000488228 PRB4P10163 310 aaPredicted RBP8.17□□□□□ -1.1
UBE4B-210ENST00000488228 MEOX2P50222 304 aa8.17□□□□□ -1.1
UBE4B-210ENST00000488228 SNRPD3P62318 126 aaKnown RBP8.17□□□□□ -1.1
UBE4B-210ENST00000488228 BPIFA4PQ86YQ2 179 aa8.17□□□□□ -1.1
UBE4B-210ENST00000488228 SBSPONQ8IVN8 264 aa8.17□□□□□ -1.1
UBE4B-210ENST00000488228 FAM167A-AS1Q96KT0 104 aa8.17□□□□□ -1.1
UBE4B-210ENST00000488228 C16orf92Q96LL3 132 aa8.17□□□□□ -1.1
UBE4B-210ENST00000488228 LINC00052Q96N35 136 aa8.17□□□□□ -1.1
UBE4B-210ENST00000488228 ARPC5LQ9BPX5 153 aa8.17□□□□□ -1.1
UBE4B-210ENST00000488228 PSMG3Q9BT73 122 aaPredicted RBP8.17□□□□□ -1.1
UBE4B-210ENST00000488228 MRPL32Q9BYC8 188 aaKnown RBP8.17□□□□□ -1.1
UBE4B-210ENST00000488228 FUT9Q9Y231 359 aa8.17□□□□□ -1.1
UBE4B-210ENST00000488228 ISLRO14498 428 aa8.16□□□□□ -1.1
UBE4B-210ENST00000488228 TAAR5O14804 337 aa8.16□□□□□ -1.1
UBE4B-210ENST00000488228 C1QBP02746 253 aa8.16□□□□□ -1.1
UBE4B-210ENST00000488228 HLA-DMBP28068 263 aa8.16□□□□□ -1.1
UBE4B-210ENST00000488228 ID1P41134 155 aa8.16□□□□□ -1.1
UBE4B-210ENST00000488228 HAGHQ16775 308 aa8.16□□□□□ -1.1
UBE4B-210ENST00000488228 ACTL10Q5JWF8 245 aa8.16□□□□□ -1.1
UBE4B-210ENST00000488228 FAM122CQ6P4D5 195 aa8.16□□□□□ -1.1
UBE4B-210ENST00000488228 LCN15Q6UWW0 184 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms