RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 RNF125Q96EQ8 232 aa8.93□□□□□ -0.98
SDC3-204ENST00000487984 NRN1Q9NPD7 142 aa8.93□□□□□ -0.98
SDC3-204ENST00000487984 CLEC5AQ9NY25 188 aa8.93□□□□□ -0.98
SDC3-204ENST00000487984 HSPB11Q9Y547 144 aa8.93□□□□□ -0.98
SDC3-204ENST00000487984 IGKV1D-37A0A075B6S9 117 aa8.92□□□□□ -0.98
SDC3-204ENST00000487984 ZNF705EA8MWA4 302 aaPredicted RBP8.92□□□□□ -0.98
SDC3-204ENST00000487984 RBMY1A1P0DJD3 496 aaKnown RBP8.92□□□□□ -0.98
SDC3-204ENST00000487984 RBMY1CP0DJD4 496 aa8.92□□□□□ -0.98
SDC3-204ENST00000487984 S100A11P31949 105 aa8.92□□□□□ -0.98
SDC3-204ENST00000487984 GPX4P36969 197 aaPredicted RBP8.92□□□□□ -0.98
SDC3-204ENST00000487984 SULT1A1P50225 295 aa8.92□□□□□ -0.98
SDC3-204ENST00000487984 NKX2-5P52952 324 aaPredicted RBP8.92□□□□□ -0.98
SDC3-204ENST00000487984 SNRPD3P62318 126 aaKnown RBP8.92□□□□□ -0.98
SDC3-204ENST00000487984 EIF5AP63241 154 aaKnown RBP8.92□□□□□ -0.98
SDC3-204ENST00000487984 GAMTQ14353 236 aa8.92□□□□□ -0.98
SDC3-204ENST00000487984 RBMY1FQ15415 496 aaKnown RBP8.92□□□□□ -0.98
SDC3-204ENST00000487984 C9orf62Q8N4C0 152 aa8.92□□□□□ -0.98
SDC3-204ENST00000487984 KCNRGQ8N5I3 272 aa8.92□□□□□ -0.98
SDC3-204ENST00000487984 TMEM252Q8N6L7 170 aa8.92□□□□□ -0.98
SDC3-204ENST00000487984 PBDC1Q9BVG4 233 aa8.92□□□□□ -0.98
SDC3-204ENST00000487984 ARL6Q9H0F7 186 aa8.92□□□□□ -0.98
SDC3-204ENST00000487984 C11orf1Q9H5F2 150 aa8.92□□□□□ -0.98
SDC3-204ENST00000487984 PAIP2BQ9ULR5 123 aaKnown RBP8.92□□□□□ -0.98
SDC3-204ENST00000487984 X6R8D5 127 aa8.92□□□□□ -0.98
SDC3-204ENST00000487984 FRAS1Q86XX4 4008 aa8.92□□□□□ -0.98
SDC3-204ENST00000487984 AGRNO00468 2067 aa8.92□□□□□ -0.98
SDC3-204ENST00000487984 FAM24AA6NFZ4 105 aa8.91□□□□□ -0.98
SDC3-204ENST00000487984 ZFP92A6NM28 416 aa8.91□□□□□ -0.98
SDC3-204ENST00000487984 MIFP14174 115 aa8.91□□□□□ -0.98
SDC3-204ENST00000487984 PAX9P55771 341 aa8.91□□□□□ -0.98
SDC3-204ENST00000487984 ZNF90Q03938 601 aa8.91□□□□□ -0.98
SDC3-204ENST00000487984 LGALSLQ3ZCW2 172 aaPredicted RBP8.91□□□□□ -0.98
SDC3-204ENST00000487984 LGALS9CQ6DKI2 356 aa8.91□□□□□ -0.98
SDC3-204ENST00000487984 TMUB2Q71RG4 321 aa8.91□□□□□ -0.98
SDC3-204ENST00000487984 CSNK1G2-AS1Q8NCQ2 148 aa8.91□□□□□ -0.98
SDC3-204ENST00000487984 OR10P1Q8NGE3 313 aa8.91□□□□□ -0.98
SDC3-204ENST00000487984 SLC35E1Q96K37 410 aa8.91□□□□□ -0.98
SDC3-204ENST00000487984 ARPC5LQ9BPX5 153 aa8.91□□□□□ -0.98
SDC3-204ENST00000487984 HRH4Q9H3N8 390 aa8.91□□□□□ -0.98
SDC3-204ENST00000487984 SEPSECSQ9HD40 501 aaKnown RBP8.91□□□□□ -0.98
SDC3-204ENST00000487984 BORCS7-ASMTA0A0B4J1R7 106 aa8.9□□□□□ -0.98
SDC3-204ENST00000487984 RNF222A6NCQ9 220 aa8.9□□□□□ -0.98
SDC3-204ENST00000487984 H3BP45 60 aa8.9□□□□□ -0.98
SDC3-204ENST00000487984 CXCL2P19875 107 aa8.9□□□□□ -0.98
SDC3-204ENST00000487984 ATP6V1FQ16864 119 aa8.9□□□□□ -0.98
SDC3-204ENST00000487984 OR8G2PQ6IF36 304 aa8.9□□□□□ -0.98
SDC3-204ENST00000487984 TMEM14EPQ6UXP3 125 aa8.9□□□□□ -0.98
SDC3-204ENST00000487984 C2CD4CQ8TF44 421 aa8.9□□□□□ -0.98
SDC3-204ENST00000487984 ELOA3CA0A087WX78 387 aaPredicted RBP8.89□□□□□ -0.99
SDC3-204ENST00000487984 IGSF23A1L1A6 192 aa8.89□□□□□ -0.99
SDC3-204ENST00000487984 H3BMM0 161 aa8.89□□□□□ -0.99
SDC3-204ENST00000487984 BCL2L11O43521 198 aa8.89□□□□□ -0.99
SDC3-204ENST00000487984 LYZP61626 148 aa8.89□□□□□ -0.99
SDC3-204ENST00000487984 ZNF266Q14584 549 aa8.89□□□□□ -0.99
SDC3-204ENST00000487984 OPCMLQ14982 345 aa8.89□□□□□ -0.99
SDC3-204ENST00000487984 PFDN2Q9UHV9 154 aa8.89□□□□□ -0.99
SDC3-204ENST00000487984 IGKV1OR2-108A0A075B7D4 117 aa8.88□□□□□ -0.99
SDC3-204ENST00000487984 IGLL5B9A064 214 aa8.88□□□□□ -0.99
SDC3-204ENST00000487984 C11orf94C9JXX5 98 aa8.88□□□□□ -0.99
SDC3-204ENST00000487984 CST7O76096 145 aa8.88□□□□□ -0.99
SDC3-204ENST00000487984 IFNA5P01569 189 aa8.88□□□□□ -0.99
SDC3-204ENST00000487984 FABP1P07148 127 aa8.88□□□□□ -0.99
SDC3-204ENST00000487984 METTL15P1P0C7V9 234 aa8.88□□□□□ -0.99
SDC3-204ENST00000487984 HLA-DRB4P13762 266 aa8.88□□□□□ -0.99
SDC3-204ENST00000487984 HLA-DMBP28068 263 aa8.88□□□□□ -0.99
SDC3-204ENST00000487984 DEFB1P60022 68 aa8.88□□□□□ -0.99
SDC3-204ENST00000487984 NUTF2P61970 127 aaKnown RBP8.88□□□□□ -0.99
SDC3-204ENST00000487984 Q6ZTC4 211 aa8.88□□□□□ -0.99
SDC3-204ENST00000487984 SLC51BQ86UW2 128 aa8.88□□□□□ -0.99
SDC3-204ENST00000487984 TRGV9Q99603 122 aa8.88□□□□□ -0.99
SDC3-204ENST00000487984 GGACTQ9BVM4 153 aa8.88□□□□□ -0.99
SDC3-204ENST00000487984 XCL2Q9UBD3 114 aa8.88□□□□□ -0.99
SDC3-204ENST00000487984 HLA-DRB4X5D2U9 266 aa8.88□□□□□ -0.99
SDC3-204ENST00000487984 PRSS46E5RG02 174 aa8.87□□□□□ -0.99
SDC3-204ENST00000487984 SOCS3O14543 225 aa8.87□□□□□ -0.99
SDC3-204ENST00000487984 TCTAP57738 103 aa8.87□□□□□ -0.99
SDC3-204ENST00000487984 PRR20EP86478 221 aa8.87□□□□□ -0.99
SDC3-204ENST00000487984 PRR20CP86479 221 aa8.87□□□□□ -0.99
SDC3-204ENST00000487984 PRR20DP86480 221 aa8.87□□□□□ -0.99
SDC3-204ENST00000487984 PRR20BP86481 221 aa8.87□□□□□ -0.99
SDC3-204ENST00000487984 PRR20AP86496 221 aa8.87□□□□□ -0.99
SDC3-204ENST00000487984 NHLH2Q02577 135 aa8.87□□□□□ -0.99
SDC3-204ENST00000487984 SLC38A11Q08AI6 406 aa8.87□□□□□ -0.99
SDC3-204ENST00000487984 C1orf194Q5T5A4 169 aa8.87□□□□□ -0.99
SDC3-204ENST00000487984 GDF5OSQ5U4N7 250 aa8.87□□□□□ -0.99
SDC3-204ENST00000487984 EIF5AL1Q6IS14 154 aaKnown RBP8.87□□□□□ -0.99
SDC3-204ENST00000487984 THAP8Q8NA92 274 aa8.87□□□□□ -0.99
SDC3-204ENST00000487984 OR5C1Q8NGR4 320 aa8.87□□□□□ -0.99
SDC3-204ENST00000487984 ATP5SQ99766 215 aa8.87□□□□□ -0.99
SDC3-204ENST00000487984 ZNF471Q9BX82 626 aaPredicted RBP8.87□□□□□ -0.99
SDC3-204ENST00000487984 C1QTNF4Q9BXJ3 329 aa8.87□□□□□ -0.99
SDC3-204ENST00000487984 APLNQ9ULZ1 77 aa8.87□□□□□ -0.99
SDC3-204ENST00000487984 CELA1Q9UNI1 258 aa8.87□□□□□ -0.99
SDC3-204ENST00000487984 FNDC10F2Z333 226 aa8.86□□□□□ -0.99
SDC3-204ENST00000487984 TPT1P13693 172 aaKnown RBP8.86□□□□□ -0.99
SDC3-204ENST00000487984 PSMB3P49720 205 aa8.86□□□□□ -0.99
SDC3-204ENST00000487984 DLK1P80370 383 aa8.86□□□□□ -0.99
SDC3-204ENST00000487984 SCGB1C1Q8TD33 95 aa8.86□□□□□ -0.99
SDC3-204ENST00000487984 LINC00052Q96N35 136 aa8.86□□□□□ -0.99
SDC3-204ENST00000487984 TMEM147Q9BVK8 224 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms