RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 MSMBP08118 114 aa12.52□□□□□ -0.4
PKD1-220ENST00000487932 GNB1LQ9BYB4 327 aa12.52□□□□□ -0.4
PKD1-220ENST00000487932 SEC11AP67812 179 aa12.52□□□□□ -0.41
PKD1-220ENST00000487932 HEPN1Q6WQI6 88 aa12.52□□□□□ -0.41
PKD1-220ENST00000487932 MCRIP2Q9BUT9 160 aaKnown RBP12.52□□□□□ -0.41
PKD1-220ENST00000487932 ANKRD36A6QL64 1941 aa12.52□□□□□ -0.41
PKD1-220ENST00000487932 J3QKU1 62 aa12.52□□□□□ -0.41
PKD1-220ENST00000487932 IGFBP3P17936 291 aaPredicted RBP12.52□□□□□ -0.41
PKD1-220ENST00000487932 TAL2Q16559 108 aa12.52□□□□□ -0.41
PKD1-220ENST00000487932 BCL6BQ8N143 479 aaPredicted RBP12.52□□□□□ -0.41
PKD1-220ENST00000487932 GAFA1Q96PS6 74 aa12.52□□□□□ -0.41
PKD1-220ENST00000487932 hDV102S1A0JD36 115 aa12.52□□□□□ -0.41
PKD1-220ENST00000487932 UBE2BP63146 152 aa12.52□□□□□ -0.41
PKD1-220ENST00000487932 MGST2Q99735 147 aa12.52□□□□□ -0.41
PKD1-220ENST00000487932 CEP290O15078 2479 aa12.51□□□□□ -0.41
PKD1-220ENST00000487932 PSG3Q16557 428 aa12.51□□□□□ -0.41
PKD1-220ENST00000487932 DAZ1Q9NQZ3 744 aaKnown RBP12.51□□□□□ -0.41
PKD1-220ENST00000487932 DKK4Q9UBT3 224 aa12.51□□□□□ -0.41
PKD1-220ENST00000487932 A0A087WWC5 75 aa12.51□□□□□ -0.41
PKD1-220ENST00000487932 A6NNC1 897 aa12.51□□□□□ -0.41
PKD1-220ENST00000487932 GAGE2BQ13066 116 aa12.51□□□□□ -0.41
PKD1-220ENST00000487932 IGKV1D-8A0A087WSZ0 117 aa12.51□□□□□ -0.41
PKD1-220ENST00000487932 APOC4P55056 127 aa12.51□□□□□ -0.41
PKD1-220ENST00000487932 KLF5Q13887 457 aaPredicted RBP12.51□□□□□ -0.41
PKD1-220ENST00000487932 FAM90A2PQ658T7 463 aa12.51□□□□□ -0.41
PKD1-220ENST00000487932 TRBV25-1A0A075B6N4 114 aa12.51□□□□□ -0.41
PKD1-220ENST00000487932 COX11Q9Y6N1 276 aa12.51□□□□□ -0.41
PKD1-220ENST00000487932 CD5LO43866 347 aa12.51□□□□□ -0.41
PKD1-220ENST00000487932 IGKV1-5P01602 117 aa12.51□□□□□ -0.41
PKD1-220ENST00000487932 IGLV3-19P01714 112 aa12.51□□□□□ -0.41
PKD1-220ENST00000487932 HSD52Q0P140 79 aa12.51□□□□□ -0.41
PKD1-220ENST00000487932 FBLIM1Q8WUP2 373 aa12.51□□□□□ -0.41
PKD1-220ENST00000487932 IGLV2-23P01705 113 aa12.5□□□□□ -0.41
PKD1-220ENST00000487932 PRB1P04280 392 aa12.5□□□□□ -0.41
PKD1-220ENST00000487932 ZFAND6Q6FIF0 208 aa12.5□□□□□ -0.41
PKD1-220ENST00000487932 IGF2BP2-AS1Q96M15 143 aa12.5□□□□□ -0.41
PKD1-220ENST00000487932 RNF126Q9BV68 326 aa12.5□□□□□ -0.41
PKD1-220ENST00000487932 COL11A1P12107 1806 aaPredicted RBP12.5□□□□□ -0.41
PKD1-220ENST00000487932 MDS2Q8NDY4 140 aa12.5□□□□□ -0.41
PKD1-220ENST00000487932 DEFB105AQ8NG35 78 aa12.5□□□□□ -0.41
PKD1-220ENST00000487932 PDCD11Q14690 1871 aaKnown RBP12.5□□□□□ -0.41
PKD1-220ENST00000487932 CLPSL1A2RUU4 121 aa12.5□□□□□ -0.41
PKD1-220ENST00000487932 RNF222A6NCQ9 220 aa12.5□□□□□ -0.41
PKD1-220ENST00000487932 GUSBP1Q15486 140 aa12.5□□□□□ -0.41
PKD1-220ENST00000487932 VWC2Q2TAL6 325 aa12.5□□□□□ -0.41
PKD1-220ENST00000487932 TRAV12-2A0A075B6T6 113 aa12.5□□□□□ -0.41
PKD1-220ENST00000487932 IGKV1OR2-108A0A075B7D4 117 aa12.5□□□□□ -0.41
PKD1-220ENST00000487932 LIME1Q9H400 295 aa12.5□□□□□ -0.41
PKD1-220ENST00000487932 ABCA7Q8IZY2 2146 aa12.49□□□□□ -0.41
PKD1-220ENST00000487932 THSD7AQ9UPZ6 1657 aa12.49□□□□□ -0.41
PKD1-220ENST00000487932 SRRM5B3KS81 715 aa12.49□□□□□ -0.41
PKD1-220ENST00000487932 GGNQ86UU5 652 aa12.49□□□□□ -0.41
PKD1-220ENST00000487932 Q9HAA7 133 aa12.49□□□□□ -0.41
PKD1-220ENST00000487932 CR1LQ2VPA4 569 aa12.49□□□□□ -0.41
PKD1-220ENST00000487932 ZNRD1Q9P1U0 126 aa12.49□□□□□ -0.41
PKD1-220ENST00000487932 IGLV3-12A0A075B6K2 115 aa12.49□□□□□ -0.41
PKD1-220ENST00000487932 EP300Q09472 2414 aaPredicted RBP12.49□□□□□ -0.41
PKD1-220ENST00000487932 TRGV9Q99603 122 aa12.49□□□□□ -0.41
PKD1-220ENST00000487932 GSN-AS1Q9NRJ2 163 aa12.49□□□□□ -0.41
PKD1-220ENST00000487932 SIGLEC9Q9Y336 463 aa12.49□□□□□ -0.41
PKD1-220ENST00000487932 NTN3O00634 580 aaPredicted RBP12.48□□□□□ -0.41
PKD1-220ENST00000487932 SUPT4H1P63272 117 aaKnown RBP12.48□□□□□ -0.41
PKD1-220ENST00000487932 LINC00114Q6XXX2 140 aa12.48□□□□□ -0.41
PKD1-220ENST00000487932 LY6G5BQ8NDX9 201 aa12.48□□□□□ -0.41
PKD1-220ENST00000487932 AKAP6Q13023 2319 aa12.48□□□□□ -0.41
PKD1-220ENST00000487932 hADV29S1A0JD25 119 aa12.48□□□□□ -0.41
PKD1-220ENST00000487932 MMP23AO75900 390 aa12.48□□□□□ -0.41
PKD1-220ENST00000487932 CARHSP1Q9Y2V2 147 aaKnown RBP12.48□□□□□ -0.41
PKD1-220ENST00000487932 IGKV1-12A0A0C4DH73 117 aa12.48□□□□□ -0.41
PKD1-220ENST00000487932 IGKV1D-12P01611 117 aa12.48□□□□□ -0.41
PKD1-220ENST00000487932 A0A087X0K7 114 aa12.48□□□□□ -0.41
PKD1-220ENST00000487932 A0A0J9YY99 117 aa12.48□□□□□ -0.41
PKD1-220ENST00000487932 MST1LQ2TV78 715 aa12.48□□□□□ -0.41
PKD1-220ENST00000487932 IGKV2D-24A0A075B6R9 120 aa12.48□□□□□ -0.41
PKD1-220ENST00000487932 E7EQL1 145 aa12.48□□□□□ -0.41
PKD1-220ENST00000487932 SMPXQ9UHP9 88 aa12.48□□□□□ -0.41
PKD1-220ENST00000487932 MARF1Q9Y4F3 1742 aaKnown RBP12.47□□□□□ -0.41
PKD1-220ENST00000487932 IFITM2Q01629 132 aa12.47□□□□□ -0.41
PKD1-220ENST00000487932 MLANAQ16655 118 aa12.47□□□□□ -0.41
PKD1-220ENST00000487932 OVOL2Q9BRP0 275 aa12.47□□□□□ -0.41
PKD1-220ENST00000487932 DOPEY2Q9Y3R5 2298 aa12.47□□□□□ -0.41
PKD1-220ENST00000487932 FAM90A9PA6NNJ1 464 aa12.47□□□□□ -0.41
PKD1-220ENST00000487932 ATP6V0E1O15342 81 aa12.47□□□□□ -0.41
PKD1-220ENST00000487932 TMEM256Q8N2U0 113 aa12.47□□□□□ -0.41
PKD1-220ENST00000487932 OOSP1A8MZH6 123 aa12.47□□□□□ -0.41
PKD1-220ENST00000487932 AMN1Q8IY45 258 aa12.47□□□□□ -0.41
PKD1-220ENST00000487932 PRSS29PA6NIE9 313 aa12.47□□□□□ -0.41
PKD1-220ENST00000487932 HGFACQ04756 655 aa12.47□□□□□ -0.41
PKD1-220ENST00000487932 SCRT2Q9NQ03 307 aa12.47□□□□□ -0.41
PKD1-220ENST00000487932 TRAV12-1A0A0B4J245 112 aa12.47□□□□□ -0.41
PKD1-220ENST00000487932 MST1P26927 711 aa12.46□□□□□ -0.41
PKD1-220ENST00000487932 ZNRF2Q8NHG8 242 aa12.46□□□□□ -0.41
PKD1-220ENST00000487932 RMI2Q96E14 147 aa12.46□□□□□ -0.41
PKD1-220ENST00000487932 WDR83OSQ9Y284 106 aa12.46□□□□□ -0.41
PKD1-220ENST00000487932 TRPT1Q86TN4 253 aaKnown RBP12.46□□□□□ -0.41
PKD1-220ENST00000487932 DLEC1Q9Y238 1755 aa12.46□□□□□ -0.41
PKD1-220ENST00000487932 EFNA2O43921 213 aa12.46□□□□□ -0.42
PKD1-220ENST00000487932 ANGP03950 147 aaKnown RBP12.46□□□□□ -0.42
PKD1-220ENST00000487932 ARMS2P0C7Q2 107 aa12.46□□□□□ -0.42
PKD1-220ENST00000487932 ATRAIDQ6UW56 229 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms