RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 RABAC1Q9UI14 185 aa2.91□□□□□ -1.94
BRCA1-217ENST00000487825 H3BMM0 161 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 SNAI2O43623 268 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 TMEM50AO95807 157 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 CRYZL1O95825 349 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 EIF4EP06730 217 aaKnown RBP2.9□□□□□ -1.95
BRCA1-217ENST00000487825 RAB3AP20336 220 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 CEACAM6P40199 344 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 MEOX2P50222 304 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 MNAT1P51948 309 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 AP3S2P59780 193 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 TPBGQ13641 420 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 RRN3P1Q2M238 152 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 CNPY1Q3B7I2 92 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 C22orf42Q6IC83 251 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 ZNF880Q6PDB4 577 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 UQCC3Q6UW78 93 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 FAM220AQ7Z4H9 259 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 ZNF546Q86UE3 836 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 INO80EQ8NBZ0 244 aaPredicted RBP2.9□□□□□ -1.95
BRCA1-217ENST00000487825 BEST4Q8NFU0 473 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 STXBP6Q8NFX7 210 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 OR10G2Q8NGC3 310 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 LGALS14Q8TCE9 139 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 RXFP4Q8TDU9 374 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 GNPNAT1Q96EK6 184 aaPredicted RBP2.9□□□□□ -1.95
BRCA1-217ENST00000487825 THTPAQ9BU02 230 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 CHAC1Q9BUX1 264 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 ZNF446Q9NWS9 450 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 SDHAF2Q9NX18 166 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 GNG8Q9UK08 70 aa2.9□□□□□ -1.95
BRCA1-217ENST00000487825 OR4C45A6NMZ5 311 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 H3BNG1 76 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 SMLR1H3BR10 107 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 PRKYO43930 277 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 PDCD6O75340 191 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 RAB3DO95716 219 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 NAPSAO96009 420 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 CTSGP08311 255 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 DEFB130BP0DP73 79 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 DEFB130AP0DP74 79 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 HLA-DRB4P13762 266 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 IGFBP3P17936 291 aaPredicted RBP2.89□□□□□ -1.95
BRCA1-217ENST00000487825 ZNF93P35789 620 aaPredicted RBP2.89□□□□□ -1.95
BRCA1-217ENST00000487825 RPL13AP40429 203 aaKnown RBP2.89□□□□□ -1.95
BRCA1-217ENST00000487825 SNRPGP62308 76 aaKnown RBP2.89□□□□□ -1.95
BRCA1-217ENST00000487825 VSNL1P62760 191 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 ASAH1Q13510 395 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 ARFRP1Q13795 201 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 TP53I3Q53FA7 332 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 TMEM236Q5W0B7 351 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 TMEM17Q86X19 198 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 C1orf158Q8N1D5 194 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 JAGN1Q8N5M9 183 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 ZNF709Q8N972 641 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 CCDC197Q8NCU1 140 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 CIRBP-AS1Q8TBR5 109 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 S100A13Q99584 98 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 HOPXQ9BPY8 73 aaPredicted RBP2.89□□□□□ -1.95
BRCA1-217ENST00000487825 OR2D2Q9H210 308 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 OR51E2Q9H255 320 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 C21orf62Q9NYP8 219 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 GOLT1BQ9Y3E0 138 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 HLA-DRB4X5D2U9 266 aa2.89□□□□□ -1.95
BRCA1-217ENST00000487825 IGHV3-66A0A0C4DH42 116 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 IGLC7A0M8Q6 106 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 CCSO14618 274 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 YIF1AO95070 293 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 HTR1AP08908 422 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 RAB4AP20338 218 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 PMCHP20382 165 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 M6PRP20645 277 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 FXYD7P58549 80 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 HLA-DRB3P79483 266 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 ZNF85Q03923 595 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 ACOT6Q3I5F7 207 aaPredicted RBP2.88□□□□□ -1.95
BRCA1-217ENST00000487825 YIF1BQ5BJH7 314 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 PSMG4Q5JS54 123 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 C9orf129Q5T035 196 aaKnown RBP2.88□□□□□ -1.95
BRCA1-217ENST00000487825 DDI2Q5TDH0 399 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 ZNF773Q6PK81 442 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 MOB1BQ7L9L4 216 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 PUSL1Q8N0Z8 303 aaKnown RBP2.88□□□□□ -1.95
BRCA1-217ENST00000487825 UBAC2Q8NBM4 344 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 OR4C16Q8NGL9 310 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 OR52E5Q8NH55 327 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 VSTM2AQ8TAG5 236 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 TMEM167AQ8TBQ9 72 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 ADTRPQ96IZ2 230 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 GINS3Q9BRX5 216 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 REEP1Q9H902 201 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 TAS2R4Q9NYW5 299 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 TVP23BQ9NYZ1 205 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 GHRLQ9UBU3 117 aa2.88□□□□□ -1.95
BRCA1-217ENST00000487825 WARS2Q9UGM6 360 aaKnown RBP2.88□□□□□ -1.95
BRCA1-217ENST00000487825 A0A096LPF7 62 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 IGKV1-6A0A0C4DH72 117 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 A0A0G2JND7 137 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 PLAC8L1A1L4L8 177 aa2.87□□□□□ -1.95
BRCA1-217ENST00000487825 CENPXA8MT69 81 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms