RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 WDR61Q9GZS3 305 aaKnown RBP8.39□□□□□ -1.07
TRIM56-204ENST00000487252 RBFOX3A6NFN3 312 aa8.38□□□□□ -1.07
TRIM56-204ENST00000487252 MARCH11A6NNE9 402 aa8.38□□□□□ -1.07
TRIM56-204ENST00000487252 M0R1X1 148 aa8.38□□□□□ -1.07
TRIM56-204ENST00000487252 NUPL2O15504 423 aaKnown RBP8.38□□□□□ -1.07
TRIM56-204ENST00000487252 ATP5G2Q06055 141 aa8.38□□□□□ -1.07
TRIM56-204ENST00000487252 POU2AF1Q16633 256 aa8.38□□□□□ -1.07
TRIM56-204ENST00000487252 OR2B11Q5JQS5 317 aa8.38□□□□□ -1.07
TRIM56-204ENST00000487252 SPANXN5Q5MJ07 72 aa8.38□□□□□ -1.07
TRIM56-204ENST00000487252 DTD1Q8TEA8 209 aa8.38□□□□□ -1.07
TRIM56-204ENST00000487252 ADTRPQ96IZ2 230 aa8.38□□□□□ -1.07
TRIM56-204ENST00000487252 TMEM147Q9BVK8 224 aa8.38□□□□□ -1.07
TRIM56-204ENST00000487252 SLC35B3Q9H1N7 401 aa8.38□□□□□ -1.07
TRIM56-204ENST00000487252 WASHC3Q9Y3C0 194 aa8.38□□□□□ -1.07
TRIM56-204ENST00000487252 FCGR3BO75015 233 aa8.37□□□□□ -1.07
TRIM56-204ENST00000487252 OR9G9P0C7N8 305 aa8.37□□□□□ -1.07
TRIM56-204ENST00000487252 SPCS3P61009 180 aa8.37□□□□□ -1.07
TRIM56-204ENST00000487252 RPL39P5Q59GN2 51 aa8.37□□□□□ -1.07
TRIM56-204ENST00000487252 UBE2DNLQ8IWF7 75 aa8.37□□□□□ -1.07
TRIM56-204ENST00000487252 C6orf223Q8N319 242 aa8.37□□□□□ -1.07
TRIM56-204ENST00000487252 OR10G4Q8NGN3 311 aa8.37□□□□□ -1.07
TRIM56-204ENST00000487252 OR5B3Q8NH48 314 aa8.37□□□□□ -1.07
TRIM56-204ENST00000487252 PINX1Q96BK5 328 aaKnown RBP8.37□□□□□ -1.07
TRIM56-204ENST00000487252 CHRDL1Q9BU40 450 aa8.37□□□□□ -1.07
TRIM56-204ENST00000487252 PLA2G2DQ9UNK4 145 aa8.37□□□□□ -1.07
TRIM56-204ENST00000487252 PRELID3BQ9Y3B1 194 aa8.37□□□□□ -1.07
TRIM56-204ENST00000487252 ELOA3CA0A087WX78 387 aaPredicted RBP8.36□□□□□ -1.07
TRIM56-204ENST00000487252 IGHV4-28A0A0C4DH34 117 aa8.36□□□□□ -1.07
TRIM56-204ENST00000487252 LOC102723971A0A1B0GUV8 181 aa8.36□□□□□ -1.07
TRIM56-204ENST00000487252 C15orf62A8K5M9 175 aa8.36□□□□□ -1.07
TRIM56-204ENST00000487252 IGKV1-16P04430 117 aa8.36□□□□□ -1.07
TRIM56-204ENST00000487252 CRYGBP07316 175 aa8.36□□□□□ -1.07
TRIM56-204ENST00000487252 IL6RP08887 468 aaPredicted RBP8.36□□□□□ -1.07
TRIM56-204ENST00000487252 SRP19P09132 144 aaKnown RBP8.36□□□□□ -1.07
TRIM56-204ENST00000487252 NQO2P16083 231 aa8.36□□□□□ -1.07
TRIM56-204ENST00000487252 PPT1P50897 306 aa8.36□□□□□ -1.07
TRIM56-204ENST00000487252 RAB2AP61019 212 aa8.36□□□□□ -1.07
TRIM56-204ENST00000487252 ICAM4Q14773 271 aa8.36□□□□□ -1.07
TRIM56-204ENST00000487252 C12orf74Q32Q52 190 aa8.36□□□□□ -1.07
TRIM56-204ENST00000487252 TMEM41BQ5BJD5 291 aa8.36□□□□□ -1.07
TRIM56-204ENST00000487252 LCE2AQ5TA79 106 aaPredicted RBP8.36□□□□□ -1.07
TRIM56-204ENST00000487252 OR4A47Q6IF82 309 aa8.36□□□□□ -1.07
TRIM56-204ENST00000487252 LILRB2Q8N423 598 aa8.36□□□□□ -1.07
TRIM56-204ENST00000487252 OR4S2Q8NH73 311 aa8.36□□□□□ -1.07
TRIM56-204ENST00000487252 RSG1Q9BU20 258 aa8.36□□□□□ -1.07
TRIM56-204ENST00000487252 QTRT1Q9BXR0 403 aaKnown RBP8.36□□□□□ -1.07
TRIM56-204ENST00000487252 EIF5A2Q9GZV4 153 aaKnown RBP8.36□□□□□ -1.07
TRIM56-204ENST00000487252 RPRMQ9NS64 109 aa8.36□□□□□ -1.07
TRIM56-204ENST00000487252 NDUFS6O75380 124 aaKnown RBP8.35□□□□□ -1.07
TRIM56-204ENST00000487252 ERVK-16P61578 105 aa8.35□□□□□ -1.07
TRIM56-204ENST00000487252 ZNF726P1Q15940 193 aa8.35□□□□□ -1.07
TRIM56-204ENST00000487252 KHDC3LQ587J8 217 aa8.35□□□□□ -1.07
TRIM56-204ENST00000487252 SLC25A24Q6NUK1 477 aa8.35□□□□□ -1.07
TRIM56-204ENST00000487252 CBLN2Q8IUK8 224 aa8.35□□□□□ -1.07
TRIM56-204ENST00000487252 APRG1Q8IVJ8 170 aa8.35□□□□□ -1.07
TRIM56-204ENST00000487252 ZNF383Q8NA42 475 aa8.35□□□□□ -1.07
TRIM56-204ENST00000487252 NECAP1Q8NC96 275 aa8.35□□□□□ -1.07
TRIM56-204ENST00000487252 OR10P1Q8NGE3 313 aa8.35□□□□□ -1.07
TRIM56-204ENST00000487252 SFT2D1Q8WV19 159 aa8.35□□□□□ -1.07
TRIM56-204ENST00000487252 SMCO4Q9NRQ5 59 aa8.35□□□□□ -1.07
TRIM56-204ENST00000487252 MRPL27Q9P0M9 148 aaKnown RBP8.35□□□□□ -1.07
TRIM56-204ENST00000487252 MDFICQ9P1T7 246 aa8.35□□□□□ -1.07
TRIM56-204ENST00000487252 COLCA2A8K830 154 aa8.34□□□□□ -1.07
TRIM56-204ENST00000487252 CEBPZOSA8MTT3 80 aa8.34□□□□□ -1.07
TRIM56-204ENST00000487252 PRSS46E5RG02 174 aa8.34□□□□□ -1.07
TRIM56-204ENST00000487252 H7C2Y5 167 aa8.34□□□□□ -1.07
TRIM56-204ENST00000487252 IGLV2-23P01705 113 aa8.34□□□□□ -1.07
TRIM56-204ENST00000487252 MIFP14174 115 aa8.34□□□□□ -1.07
TRIM56-204ENST00000487252 RPP30P78346 268 aaKnown RBP8.34□□□□□ -1.07
TRIM56-204ENST00000487252 RHEBQ15382 184 aa8.34□□□□□ -1.07
TRIM56-204ENST00000487252 C15orf32Q32M92 178 aa8.34□□□□□ -1.07
TRIM56-204ENST00000487252 FAM106AQ4KMX7 169 aa8.34□□□□□ -1.07
TRIM56-204ENST00000487252 OR8G2PQ6IF36 304 aa8.34□□□□□ -1.07
TRIM56-204ENST00000487252 TMEM88Q6PEY1 159 aa8.34□□□□□ -1.07
TRIM56-204ENST00000487252 GGACTQ9BVM4 153 aa8.34□□□□□ -1.07
TRIM56-204ENST00000487252 VSIRQ9H7M9 311 aa8.34□□□□□ -1.07
TRIM56-204ENST00000487252 TMEM140Q9NV12 185 aa8.34□□□□□ -1.07
TRIM56-204ENST00000487252 UBE2L5PA0A1B0GUS4 154 aa8.33□□□□□ -1.08
TRIM56-204ENST00000487252 ZNF320A2RRD8 509 aa8.33□□□□□ -1.08
TRIM56-204ENST00000487252 C7orf77A4D0Y5 90 aa8.33□□□□□ -1.08
TRIM56-204ENST00000487252 C15orf61A6NNL5 157 aa8.33□□□□□ -1.08
TRIM56-204ENST00000487252 MBP02144 154 aa8.33□□□□□ -1.08
TRIM56-204ENST00000487252 APELAP0DMC3 54 aa8.33□□□□□ -1.08
TRIM56-204ENST00000487252 MAS1LP35410 378 aa8.33□□□□□ -1.08
TRIM56-204ENST00000487252 FAM3BP58499 235 aaPredicted RBP8.33□□□□□ -1.08
TRIM56-204ENST00000487252 DLK1P80370 383 aa8.33□□□□□ -1.08
TRIM56-204ENST00000487252 ZNF124Q15973 351 aa8.33□□□□□ -1.08
TRIM56-204ENST00000487252 FAM122CQ6P4D5 195 aa8.33□□□□□ -1.08
TRIM56-204ENST00000487252 UNQ9165/PRO28630Q6UXU0 137 aa8.33□□□□□ -1.08
TRIM56-204ENST00000487252 SSX7Q7RTT5 188 aa8.33□□□□□ -1.08
TRIM56-204ENST00000487252 C15orf54Q8N8G6 183 aa8.33□□□□□ -1.08
TRIM56-204ENST00000487252 OR4A16Q8NH70 328 aa8.33□□□□□ -1.08
TRIM56-204ENST00000487252 FAM210BQ96KR6 192 aa8.33□□□□□ -1.08
TRIM56-204ENST00000487252 TMEM14BQ9NUH8 114 aa8.33□□□□□ -1.08
TRIM56-204ENST00000487252 CELA1Q9UNI1 258 aa8.33□□□□□ -1.08
TRIM56-204ENST00000487252 WDR83OSQ9Y284 106 aa8.33□□□□□ -1.08
TRIM56-204ENST00000487252 TRAV3A0A0B4J244 114 aa8.32□□□□□ -1.08
TRIM56-204ENST00000487252 NBDYA0A0U1RRE5 68 aa8.32□□□□□ -1.08
TRIM56-204ENST00000487252 A0A1B0GV50 99 aa8.32□□□□□ -1.08
TRIM56-204ENST00000487252 OR4C46A6NHA9 309 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms