RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 MXRA5Q9NR99 2828 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 NDUFB4O95168 129 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 LY6G6DO95868 133 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 RNASE1P07998 156 aaKnown RBP4.76□□□□□ -1.65
VAMP3-203ENST00000487194 CD99P14209 185 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 NPPCP23582 126 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 MEOX2P50222 304 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 SUMO1P63165 101 aaKnown RBP4.76□□□□□ -1.65
VAMP3-203ENST00000487194 PDE6HQ13956 83 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 KIAA0141Q14154 515 aaPredicted RBP4.76□□□□□ -1.65
VAMP3-203ENST00000487194 ZNF674Q2M3X9 581 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 TMEM95Q3KNT9 176 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 AWAT1Q58HT5 328 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 C1orf194Q5T5A4 169 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 LEMD1Q68G75 181 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 ZNF329Q86UD4 541 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 OR8I2Q8N0Y5 310 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 LYPD1Q8N2G4 141 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 RNF152Q8N8N0 203 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 BLNKQ8WV28 456 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 DUX5Q96PT3 197 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 PARLQ9H300 379 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 ZFAND3Q9H8U3 227 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 SDF2L1Q9HCN8 221 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 OTORQ9NRC9 128 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 SERTAD4Q9NUC0 356 aa4.76□□□□□ -1.65
VAMP3-203ENST00000487194 PEF1Q9UBV8 284 aaKnown RBP4.76□□□□□ -1.65
VAMP3-203ENST00000487194 TRBV19A0A075B6N1 114 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 A0A087WWC5 75 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 SCO2A0A1W2PP80 73 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 A0A1W2PS18 150 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 C7orf77A4D0Y5 90 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 FAM181BA6NEQ2 426 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 GGTLC3B5MD39 225 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 C9JCJ5 164 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 PPP5D1E7EU14 171 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 MRPS12O15235 138 aaKnown RBP4.75□□□□□ -1.65
VAMP3-203ENST00000487194 BUB3O43684 328 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 ZNF253O75346 499 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 SCO1O75880 301 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 IGHV3-11P01762 117 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 S100A9P06702 114 aaKnown RBP4.75□□□□□ -1.65
VAMP3-203ENST00000487194 IGLC2P0DOY2 106 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 ATF4P18848 351 aaPredicted RBP4.75□□□□□ -1.65
VAMP3-203ENST00000487194 CRYBB3P26998 211 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 MYCNOSP40205 109 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 TAS2R60P59551 318 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 HILS1P60008 231 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 RANP62826 216 aaKnown RBP4.75□□□□□ -1.65
VAMP3-203ENST00000487194 PSG9Q00887 426 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 FAM106AQ4KMX7 169 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 ATRAIDQ6UW56 229 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 Q6ZSV7 163 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 C5orf17Q8NAS9 161 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 MYOZ3Q8TDC0 251 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 GRAMD2BQ96HH9 432 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 UBE2E2Q96LR5 201 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 ELOVL1Q9BW60 279 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 RPS10P5Q9NQ39 176 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 ZNF586Q9NXT0 402 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 LY96Q9Y6Y9 160 aa4.75□□□□□ -1.65
VAMP3-203ENST00000487194 A0A087X0K7 114 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 IGHV3-35A0A0C4DH35 117 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 CLPSL1A2RUU4 121 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 PGPA6NDG6 321 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 HELTA6NFD8 242 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 K7EMT4 169 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 PEX7O00628 323 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 MT-ND4LP03901 98 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 SLC25A5P05141 298 aaKnown RBP4.74□□□□□ -1.65
VAMP3-203ENST00000487194 RPLP1P05386 114 aaKnown RBP4.74□□□□□ -1.65
VAMP3-203ENST00000487194 LGALS1P09382 135 aaKnown RBP4.74□□□□□ -1.65
VAMP3-203ENST00000487194 BMI1P35226 326 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 AKR1C3P42330 323 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 RPL35P42766 123 aaKnown RBP4.74□□□□□ -1.65
VAMP3-203ENST00000487194 GALR1P47211 349 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 CNN1P51911 297 aaKnown RBP4.74□□□□□ -1.65
VAMP3-203ENST00000487194 RPL23P62829 140 aaKnown RBP4.74□□□□□ -1.65
VAMP3-203ENST00000487194 BTN1A1Q13410 526 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 ADIRFQ15847 76 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 RPEL1Q2QD12 228 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 LCNL1Q6ZST4 164 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 GPHB5Q86YW7 130 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 ARL6IP6Q8N6S5 226 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 KLHDC1Q8N7A1 406 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 CMTM2Q8TAZ6 248 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 C2CD4CQ8TF44 421 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 WFDC12Q8WWY7 111 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 ZNF414Q96IQ9 312 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 SMR3AQ99954 134 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 ATG101Q9BSB4 218 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 C20orf24Q9BUV8 137 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 CTDSP1Q9GZU7 261 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 Q9H3A6 140 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 C16orf95Q9H693 158 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 AAMDCQ9H7C9 122 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 TUBA4BQ9H853 241 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 ESM1Q9NQ30 184 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 SMCO4Q9NRQ5 59 aa4.74□□□□□ -1.65
VAMP3-203ENST00000487194 TMEM242Q9NWH2 141 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms