RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 MRPS25P82663 173 aaKnown RBP2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 HPCAP84074 193 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 PRB3Q04118 309 aaPredicted RBP2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 PPP1R1AQ13522 171 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 FAM201AQ5SY85 155 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 EBLN2Q6P2I7 272 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 TNFAIP8L2Q6P589 184 aaPredicted RBP2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 VMO1Q7Z5L0 202 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 Q8NAQ8 132 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 OR5K1Q8NHB7 308 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 MFSD8Q8NHS3 518 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 C10orf82Q8WW14 230 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 OR5P3Q8WZ94 311 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 ROPN1LQ96C74 230 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 OR51I1Q9H343 314 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 TMEM216Q9P0N5 145 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 PHLDA3Q9Y5J5 127 aa2.39□□□□□ -2.03
PRPF38A-203ENST00000487160 A0A096LPI6 279 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 LOC102725191A0A1B0GVB3 256 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 C5orf49A4QMS7 147 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 TMEM210A6NLX4 147 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 EVPLLA8MZ36 301 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 NPFFO15130 113 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 REG1AP05451 166 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 LINC00614P0C842 121 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 RPS4Y1P22090 263 aaKnown RBP2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 GADD45AP24522 165 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 REG1BP48304 166 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 COPZ1P61923 177 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 LSM6P62312 80 aaKnown RBP2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 ARF6P62330 175 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 KLRD1Q13241 179 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 PABPC1L2AQ5JQF8 200 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 SAPCD1Q5SSQ6 148 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 LCN8Q6JVE9 175 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 LYPD6Q86Y78 171 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 CLECL1Q8IZS7 167 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 LRRC18Q8N456 261 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 LY6G5BQ8NDX9 201 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 TESCQ96BS2 214 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 DPY30Q9C005 99 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 LINC00527Q9UJ94 153 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 SNX12Q9UMY4 172 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 FIS1Q9Y3D6 152 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 HECTD4Q9Y4D8 3996 aa2.38□□□□□ -2.03
PRPF38A-203ENST00000487160 DSCAML1Q8TD84 2053 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 TRAV36DV7A0A075B6V5 113 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 A0A087WUJ7 227 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 A0A1B0GU33 70 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 EXOC1LA0A1B0GW35 172 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 TMEM114B3SHH9 223 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 H3BSA7 217 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 HMGN4O00479 90 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 LECT2O14960 151 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 OR2T1O43869 369 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 SH2D1AO60880 128 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 C1QCP02747 245 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 DBIP07108 87 aaKnown RBP2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 LINC00032P0C843 101 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 NEFHP12036 1026 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 CFL1P23528 166 aaKnown RBP2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 PSMA1P25786 263 aaKnown RBP2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 PSMB3P49720 205 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 SULT1A2P50226 295 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 DAD1P61803 113 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 HOXC5Q00444 222 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 TMEM267Q0VDI3 215 aaPredicted RBP2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 GNA13Q14344 377 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 C10orf91Q5T1B1 145 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 SFXN4Q6P4A7 337 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 ZCCHC23Q6ZST2 131 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 CCDC121Q6ZUS5 278 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 OR5AS1Q8N127 324 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 SLC35F6Q8N357 371 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 OR1M1Q8NGA1 313 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 ACY3Q96HD9 319 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 OR52B2Q96RD2 323 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 GTSF1LQ9H1H1 148 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 ZNF286AQ9HBT8 521 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 GLTPQ9NZD2 209 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 CARHSP1Q9Y2V2 147 aaKnown RBP2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 LINC00588Q9Y4M8 146 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 KIAA1109Q2LD37 5005 aa2.37□□□□□ -2.03
PRPF38A-203ENST00000487160 HUWE1Q7Z6Z7 4374 aaKnown RBP2.36□□□□□ -2.03
PRPF38A-203ENST00000487160 IGKV1D-42A0A075B6H8 117 aa2.36□□□□□ -2.03
PRPF38A-203ENST00000487160 IGHV3OR15-7A0A075B7D8 119 aa2.36□□□□□ -2.03
PRPF38A-203ENST00000487160 TEX50A0A1B0GTY4 177 aa2.36□□□□□ -2.03
PRPF38A-203ENST00000487160 A0A1W2PQL4 384 aaPredicted RBP2.36□□□□□ -2.03
PRPF38A-203ENST00000487160 H3BQF6 201 aa2.36□□□□□ -2.03
PRPF38A-203ENST00000487160 IL6P05231 212 aa2.36□□□□□ -2.03
PRPF38A-203ENST00000487160 SRP9P49458 86 aaKnown RBP2.36□□□□□ -2.03
PRPF38A-203ENST00000487160 PSG4Q00888 419 aa2.36□□□□□ -2.03
PRPF38A-203ENST00000487160 APOFQ13790 326 aa2.36□□□□□ -2.03
PRPF38A-203ENST00000487160 ZNF181Q2M3W8 571 aa2.36□□□□□ -2.03
PRPF38A-203ENST00000487160 LRRC75BQ2VPJ9 315 aa2.36□□□□□ -2.03
PRPF38A-203ENST00000487160 LIN52Q52LA3 116 aa2.36□□□□□ -2.03
PRPF38A-203ENST00000487160 ACSM3Q53FZ2 586 aa2.36□□□□□ -2.03
PRPF38A-203ENST00000487160 OGFRL1Q5TC84 451 aaPredicted RBP2.36□□□□□ -2.03
PRPF38A-203ENST00000487160 HCP5Q6MZN7 132 aa2.36□□□□□ -2.03
PRPF38A-203ENST00000487160 C5orf46Q6UWT4 87 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms