RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 SLC25A32Q9H2D1 315 aa7.55□□□□□ -1.2
NEK4-204ENST00000487068 OR5AC2Q9NZP5 309 aa7.55□□□□□ -1.2
NEK4-204ENST00000487068 SLC45A2Q9UMX9 530 aa7.55□□□□□ -1.2
NEK4-204ENST00000487068 ZNF98A6NK75 572 aa7.54□□□□□ -1.2
NEK4-204ENST00000487068 FGF7P21781 194 aa7.54□□□□□ -1.2
NEK4-204ENST00000487068 S100A11P31949 105 aa7.54□□□□□ -1.2
NEK4-204ENST00000487068 CAMLGP49069 296 aa7.54□□□□□ -1.2
NEK4-204ENST00000487068 MEOX2P50222 304 aa7.54□□□□□ -1.2
NEK4-204ENST00000487068 H2BFSP57053 126 aa7.54□□□□□ -1.2
NEK4-204ENST00000487068 MUC7Q8TAX7 377 aa7.54□□□□□ -1.2
NEK4-204ENST00000487068 C16orf92Q96LL3 132 aa7.54□□□□□ -1.2
NEK4-204ENST00000487068 GPR82Q96P67 336 aa7.54□□□□□ -1.2
NEK4-204ENST00000487068 MGST2Q99735 147 aa7.54□□□□□ -1.2
NEK4-204ENST00000487068 SLC25A39Q9BZJ4 359 aaPredicted RBP7.54□□□□□ -1.2
NEK4-204ENST00000487068 CSTL1Q9H114 145 aa7.54□□□□□ -1.2
NEK4-204ENST00000487068 ARV1Q9H2C2 271 aa7.54□□□□□ -1.2
NEK4-204ENST00000487068 HUWE1Q7Z6Z7 4374 aaKnown RBP7.53□□□□□ -1.2
NEK4-204ENST00000487068 H3BRN7 92 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 SPRY2O43597 315 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 PSMB3P49720 205 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 EWSR1Q01844 656 aaKnown RBP eCLIP7.53□□□□□ -1.2
NEK4-204ENST00000487068 IL15RAQ13261 267 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 CLINT1Q14677 625 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 ATP6V1FQ16864 119 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 RGS21Q2M5E4 152 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 ANKRD39Q53RE8 183 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 CASC10Q5T4H9 136 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 SAMD13Q5VXD3 122 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 C10orf113Q5VZT2 155 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 Q6ZRG5 221 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 Q6ZWC4 215 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 OR5C1Q8NGR4 320 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 THAP6Q8TBB0 222 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 LRRC20Q8TCA0 184 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 OVOL2Q9BRP0 275 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 RSG1Q9BU20 258 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 MED28Q9H204 178 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 C11orf1Q9H5F2 150 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 MBD2Q9UBB5 411 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 RNF24Q9Y225 148 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 WDR83OSQ9Y284 106 aa7.53□□□□□ -1.2
NEK4-204ENST00000487068 ISLRO14498 428 aa7.52□□□□□ -1.21
NEK4-204ENST00000487068 MPC2O95563 127 aa7.52□□□□□ -1.21
NEK4-204ENST00000487068 IGKV3-20P01619 116 aa7.52□□□□□ -1.21
NEK4-204ENST00000487068 LYL1P12980 280 aa7.52□□□□□ -1.21
NEK4-204ENST00000487068 RPL7P18124 248 aaKnown RBP7.52□□□□□ -1.21
NEK4-204ENST00000487068 B2MP61769 119 aa7.52□□□□□ -1.21
NEK4-204ENST00000487068 NHLH2Q02577 135 aa7.52□□□□□ -1.21
NEK4-204ENST00000487068 PXDC1Q5TGL8 231 aa7.52□□□□□ -1.21
NEK4-204ENST00000487068 MIC13Q5XKP0 118 aa7.52□□□□□ -1.21
NEK4-204ENST00000487068 ZFAND6Q6FIF0 208 aa7.52□□□□□ -1.21
NEK4-204ENST00000487068 LINC00305Q7Z4B0 112 aa7.52□□□□□ -1.21
NEK4-204ENST00000487068 SHANK2-AS3Q9BTD1 123 aa7.52□□□□□ -1.21
NEK4-204ENST00000487068 BIRC6Q9NR09 4857 aa7.51□□□□□ -1.21
NEK4-204ENST00000487068 STAB2Q8WWQ8 2551 aa7.51□□□□□ -1.21
NEK4-204ENST00000487068 SPP1P10451 314 aa7.51□□□□□ -1.21
NEK4-204ENST00000487068 PLP1P60201 277 aa7.51□□□□□ -1.21
NEK4-204ENST00000487068 NUTF2P61970 127 aaKnown RBP7.51□□□□□ -1.21
NEK4-204ENST00000487068 EBLN2Q6P2I7 272 aa7.51□□□□□ -1.21
NEK4-204ENST00000487068 TRPT1Q86TN4 253 aaKnown RBP7.51□□□□□ -1.21
NEK4-204ENST00000487068 ZNF709Q8N972 641 aa7.51□□□□□ -1.21
NEK4-204ENST00000487068 OR4B1Q8NGF8 309 aa7.51□□□□□ -1.21
NEK4-204ENST00000487068 OR1L4Q8NGR5 311 aa7.51□□□□□ -1.21
NEK4-204ENST00000487068 RNF183Q96D59 192 aa7.51□□□□□ -1.21
NEK4-204ENST00000487068 PFDN5Q99471 154 aa7.51□□□□□ -1.21
NEK4-204ENST00000487068 SMIM3Q9BZL3 60 aa7.51□□□□□ -1.21
NEK4-204ENST00000487068 EDA2RQ9HAV5 297 aa7.51□□□□□ -1.21
NEK4-204ENST00000487068 SEPSECSQ9HD40 501 aaKnown RBP7.51□□□□□ -1.21
NEK4-204ENST00000487068 KCNIP2Q9NS61 270 aa7.51□□□□□ -1.21
NEK4-204ENST00000487068 RPRMQ9NS64 109 aa7.51□□□□□ -1.21
NEK4-204ENST00000487068 TP53TG1Q9Y2A0 90 aa7.51□□□□□ -1.21
NEK4-204ENST00000487068 PXMP4Q9Y6I8 212 aa7.51□□□□□ -1.21
NEK4-204ENST00000487068 RYR2Q92736 4967 aa7.5□□□□□ -1.21
NEK4-204ENST00000487068 A0A0J9YWU9 116 aa7.5□□□□□ -1.21
NEK4-204ENST00000487068 C17orf112F2Z3M2 114 aa7.5□□□□□ -1.21
NEK4-204ENST00000487068 H0YIZ8 118 aa7.5□□□□□ -1.21
NEK4-204ENST00000487068 MPDU1O75352 247 aa7.5□□□□□ -1.21
NEK4-204ENST00000487068 HLA-DRB4P13762 266 aa7.5□□□□□ -1.21
NEK4-204ENST00000487068 C4BPBP20851 252 aa7.5□□□□□ -1.21
NEK4-204ENST00000487068 DEFB1P60022 68 aa7.5□□□□□ -1.21
NEK4-204ENST00000487068 VWC2Q2TAL6 325 aa7.5□□□□□ -1.21
NEK4-204ENST00000487068 MORN3Q6PF18 240 aaPredicted RBP7.5□□□□□ -1.21
NEK4-204ENST00000487068 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.5□□□□□ -1.21
NEK4-204ENST00000487068 ZNF738Q8NE65 137 aa7.5□□□□□ -1.21
NEK4-204ENST00000487068 GATAD1Q8WUU5 269 aa7.5□□□□□ -1.21
NEK4-204ENST00000487068 RARRES2Q99969 163 aa7.5□□□□□ -1.21
NEK4-204ENST00000487068 NPCDR1Q9BY65 106 aa7.5□□□□□ -1.21
NEK4-204ENST00000487068 SLC39A9Q9NUM3 307 aa7.5□□□□□ -1.21
NEK4-204ENST00000487068 HLA-DRB4X5D2U9 266 aa7.5□□□□□ -1.21
NEK4-204ENST00000487068 EPPK1P58107 5090 aaKnown RBP7.5□□□□□ -1.21
NEK4-204ENST00000487068 SOCS3O14543 225 aa7.49□□□□□ -1.21
NEK4-204ENST00000487068 SNRPCP09234 159 aaKnown RBP7.49□□□□□ -1.21
NEK4-204ENST00000487068 CXCL3P19876 107 aa7.49□□□□□ -1.21
NEK4-204ENST00000487068 RPL12P30050 165 aaKnown RBP7.49□□□□□ -1.21
NEK4-204ENST00000487068 OPCMLQ14982 345 aa7.49□□□□□ -1.21
NEK4-204ENST00000487068 FCN2Q15485 313 aa7.49□□□□□ -1.21
NEK4-204ENST00000487068 TMEM41BQ5BJD5 291 aa7.49□□□□□ -1.21
NEK4-204ENST00000487068 GDF5OSQ5U4N7 250 aa7.49□□□□□ -1.21
NEK4-204ENST00000487068 PATE2Q6UY27 113 aa7.49□□□□□ -1.21
NEK4-204ENST00000487068 FOXI2Q6ZQN5 318 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms