RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 CBY3A6NI87 242 aa9.69□□□□□ -0.86
COL3A1-206ENST00000487010 TEX22C9J3V5 150 aa9.69□□□□□ -0.86
COL3A1-206ENST00000487010 CD5LO43866 347 aa9.69□□□□□ -0.86
COL3A1-206ENST00000487010 TOX4O94842 621 aa9.69□□□□□ -0.86
COL3A1-206ENST00000487010 ARMS2P0C7Q2 107 aa9.69□□□□□ -0.86
COL3A1-206ENST00000487010 TMEM133Q9H2Q1 129 aa9.69□□□□□ -0.86
COL3A1-206ENST00000487010 A0A087X0K7 114 aa9.68□□□□□ -0.86
COL3A1-206ENST00000487010 Q6ZS92 163 aa9.68□□□□□ -0.86
COL3A1-206ENST00000487010 PMCHL2Q9BQD1 86 aa9.68□□□□□ -0.86
COL3A1-206ENST00000487010 ZNF747Q9BV97 191 aa9.68□□□□□ -0.86
COL3A1-206ENST00000487010 AP5S1Q9NUS5 200 aa9.68□□□□□ -0.86
COL3A1-206ENST00000487010 KAAG1Q9UBP8 84 aa9.68□□□□□ -0.86
COL3A1-206ENST00000487010 TIMM8BQ9Y5J9 83 aaPredicted RBP9.68□□□□□ -0.86
COL3A1-206ENST00000487010 I3L2K1 104 aa9.68□□□□□ -0.86
COL3A1-206ENST00000487010 COX8AP10176 69 aa9.68□□□□□ -0.86
COL3A1-206ENST00000487010 GPR183P32249 361 aa9.68□□□□□ -0.86
COL3A1-206ENST00000487010 ARF6P62330 175 aa9.68□□□□□ -0.86
COL3A1-206ENST00000487010 RBPJQ06330 500 aa9.68□□□□□ -0.86
COL3A1-206ENST00000487010 BSPH1Q075Z2 132 aa9.68□□□□□ -0.86
COL3A1-206ENST00000487010 AMMECR1LQ6DCA0 310 aa9.68□□□□□ -0.86
COL3A1-206ENST00000487010 PPP1R27Q86WC6 154 aa9.68□□□□□ -0.86
COL3A1-206ENST00000487010 TMEM75Q8N9X5 138 aa9.68□□□□□ -0.86
COL3A1-206ENST00000487010 FAM57AQ8TBR7 257 aa9.68□□□□□ -0.86
COL3A1-206ENST00000487010 TMEM190Q8WZ59 177 aa9.68□□□□□ -0.86
COL3A1-206ENST00000487010 ZFHX4Q86UP3 3567 aa9.68□□□□□ -0.86
COL3A1-206ENST00000487010 TRBV19A0A075B6N1 114 aa9.67□□□□□ -0.86
COL3A1-206ENST00000487010 A0A1B0GW15 77 aa9.67□□□□□ -0.86
COL3A1-206ENST00000487010 C16orf97H3BN30 126 aa9.67□□□□□ -0.86
COL3A1-206ENST00000487010 RBP4P02753 201 aa9.67□□□□□ -0.86
COL3A1-206ENST00000487010 PRSS33Q8NF86 280 aa9.67□□□□□ -0.86
COL3A1-206ENST00000487010 TNFRSF14Q92956 283 aa9.67□□□□□ -0.86
COL3A1-206ENST00000487010 RASL11BQ9BPW5 248 aa9.67□□□□□ -0.86
COL3A1-206ENST00000487010 NGBQ9NPG2 151 aa9.67□□□□□ -0.86
COL3A1-206ENST00000487010 CSN1S1P47710 185 aa9.67□□□□□ -0.86
COL3A1-206ENST00000487010 RNF151Q2KHN1 245 aa9.67□□□□□ -0.86
COL3A1-206ENST00000487010 C2orf91Q6ZV80 131 aa9.67□□□□□ -0.86
COL3A1-206ENST00000487010 FA2HQ7L5A8 372 aa9.67□□□□□ -0.86
COL3A1-206ENST00000487010 OR10AG1Q8NH19 301 aa9.67□□□□□ -0.86
COL3A1-206ENST00000487010 PRSS3P2Q8NHM4 247 aa9.67□□□□□ -0.86
COL3A1-206ENST00000487010 C17orf77Q96MU5 243 aa9.67□□□□□ -0.86
COL3A1-206ENST00000487010 SCNM1Q9BWG6 230 aa9.67□□□□□ -0.86
COL3A1-206ENST00000487010 CST9LQ9H4G1 147 aa9.67□□□□□ -0.86
COL3A1-206ENST00000487010 PSG8Q9UQ74 426 aa9.67□□□□□ -0.86
COL3A1-206ENST00000487010 INSIG2Q9Y5U4 225 aa9.67□□□□□ -0.86
COL3A1-206ENST00000487010 IGHV1-3A0A0C4DH29 117 aa9.66□□□□□ -0.86
COL3A1-206ENST00000487010 NCR2O95944 276 aa9.66□□□□□ -0.86
COL3A1-206ENST00000487010 IGKV1-17P01599 117 aa9.66□□□□□ -0.86
COL3A1-206ENST00000487010 PPBPP02775 128 aa9.66□□□□□ -0.86
COL3A1-206ENST00000487010 THBDP07204 575 aa9.66□□□□□ -0.86
COL3A1-206ENST00000487010 CRIP1P50238 77 aa9.66□□□□□ -0.86
COL3A1-206ENST00000487010 PSG9Q00887 426 aa9.66□□□□□ -0.86
COL3A1-206ENST00000487010 BPIFA4PQ86YQ2 179 aa9.66□□□□□ -0.86
COL3A1-206ENST00000487010 ASCL2Q99929 193 aa9.66□□□□□ -0.86
COL3A1-206ENST00000487010 SHANK2-AS3Q9BTD1 123 aa9.66□□□□□ -0.86
COL3A1-206ENST00000487010 RNF24Q9Y225 148 aa9.66□□□□□ -0.86
COL3A1-206ENST00000487010 K7EQM0 130 aa9.65□□□□□ -0.86
COL3A1-206ENST00000487010 IGLV1-47P01700 117 aa9.65□□□□□ -0.86
COL3A1-206ENST00000487010 DLX1P56177 255 aa9.65□□□□□ -0.86
COL3A1-206ENST00000487010 FOXE3Q13461 319 aa9.65□□□□□ -0.86
COL3A1-206ENST00000487010 PSG3Q16557 428 aa9.65□□□□□ -0.86
COL3A1-206ENST00000487010 SIGLEC15Q6ZMC9 328 aa9.65□□□□□ -0.86
COL3A1-206ENST00000487010 LYPD1Q8N2G4 141 aa9.65□□□□□ -0.86
COL3A1-206ENST00000487010 FBXL15Q9H469 300 aa9.65□□□□□ -0.86
COL3A1-206ENST00000487010 A0A0G2JNJ9 132 aa9.65□□□□□ -0.87
COL3A1-206ENST00000487010 H3BRN7 92 aa9.65□□□□□ -0.87
COL3A1-206ENST00000487010 OCIAD2Q56VL3 154 aa9.65□□□□□ -0.87
COL3A1-206ENST00000487010 LDLRAD2Q5SZI1 272 aa9.65□□□□□ -0.87
COL3A1-206ENST00000487010 Q6AWC8 147 aa9.65□□□□□ -0.87
COL3A1-206ENST00000487010 RNASE6Q93091 150 aaKnown RBP9.65□□□□□ -0.87
COL3A1-206ENST00000487010 Q9UFV3 132 aa9.65□□□□□ -0.87
COL3A1-206ENST00000487010 TRAV8-6A0A0B4J262 113 aa9.64□□□□□ -0.87
COL3A1-206ENST00000487010 BUB1B-PAK6H3BSN5 160 aa9.64□□□□□ -0.87
COL3A1-206ENST00000487010 K7EM74 188 aa9.64□□□□□ -0.87
COL3A1-206ENST00000487010 FAM106CPP0CH98 169 aa9.64□□□□□ -0.87
COL3A1-206ENST00000487010 PRB3Q04118 309 aaPredicted RBP9.64□□□□□ -0.87
COL3A1-206ENST00000487010 FAM106AQ4KMX7 169 aa9.64□□□□□ -0.87
COL3A1-206ENST00000487010 IGF2-ASQ6U949 168 aa9.64□□□□□ -0.87
COL3A1-206ENST00000487010 ZNF493Q6ZR52 646 aa9.64□□□□□ -0.87
COL3A1-206ENST00000487010 DPF1Q92782 380 aa9.64□□□□□ -0.87
COL3A1-206ENST00000487010 PEF1Q9UBV8 284 aaKnown RBP9.64□□□□□ -0.87
COL3A1-206ENST00000487010 MALRD1Q5VYJ5 2156 aa9.64□□□□□ -0.87
COL3A1-206ENST00000487010 VSTM5A8MXK1 200 aa9.63□□□□□ -0.87
COL3A1-206ENST00000487010 IFI27P40305 119 aaPredicted RBP9.63□□□□□ -0.87
COL3A1-206ENST00000487010 COTL1Q14019 142 aa9.63□□□□□ -0.87
COL3A1-206ENST00000487010 A0A096LNJ9 63 aa9.63□□□□□ -0.87
COL3A1-206ENST00000487010 K7EIM0 57 aa9.63□□□□□ -0.87
COL3A1-206ENST00000487010 MRPS12O15235 138 aaKnown RBP9.63□□□□□ -0.87
COL3A1-206ENST00000487010 SNAI2O43623 268 aa9.63□□□□□ -0.87
COL3A1-206ENST00000487010 PRB4P10163 310 aaPredicted RBP9.63□□□□□ -0.87
COL3A1-206ENST00000487010 FGF6P10767 208 aa9.63□□□□□ -0.87
COL3A1-206ENST00000487010 SEC11AP67812 179 aa9.63□□□□□ -0.87
COL3A1-206ENST00000487010 TMEM97Q5BJF2 176 aa9.63□□□□□ -0.87
COL3A1-206ENST00000487010 ARL6IP6Q8N6S5 226 aa9.63□□□□□ -0.87
COL3A1-206ENST00000487010 ZNF414Q96IQ9 312 aa9.63□□□□□ -0.87
COL3A1-206ENST00000487010 SRSF8Q9BRL6 282 aaKnown RBP9.63□□□□□ -0.87
COL3A1-206ENST00000487010 TPPP3Q9BW30 176 aa9.63□□□□□ -0.87
COL3A1-206ENST00000487010 U3KQK5 164 aa9.63□□□□□ -0.87
COL3A1-206ENST00000487010 C7orf71A4D174 169 aa9.62□□□□□ -0.87
COL3A1-206ENST00000487010 LOXL1Q08397 574 aaPredicted RBP9.62□□□□□ -0.87
COL3A1-206ENST00000487010 PIP4P2Q8N4L2 257 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms