RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 VMA21Q3ZAQ7 101 aa10.01□□□□□ -0.81
SHROOM3-208ENST00000486758 PRSS57Q6UWY2 283 aa10.01□□□□□ -0.81
SHROOM3-208ENST00000486758 PLSCR4Q9NRQ2 329 aa10.01□□□□□ -0.81
SHROOM3-208ENST00000486758 BSNQ9UPA5 3926 aa10.01□□□□□ -0.81
SHROOM3-208ENST00000486758 CTRLP40313 264 aa10□□□□□ -0.81
SHROOM3-208ENST00000486758 PERPQ96FX8 193 aa10□□□□□ -0.81
SHROOM3-208ENST00000486758 INSIG2Q9Y5U4 225 aa10□□□□□ -0.81
SHROOM3-208ENST00000486758 IGKV1OR2-108A0A075B7D4 117 aa10□□□□□ -0.81
SHROOM3-208ENST00000486758 A6NJY4 79 aa10□□□□□ -0.81
SHROOM3-208ENST00000486758 PRR30Q53SZ7 412 aaPredicted RBP10□□□□□ -0.81
SHROOM3-208ENST00000486758 TNFRSF14Q92956 283 aa10□□□□□ -0.81
SHROOM3-208ENST00000486758 USP9XQ93008 2570 aaPredicted RBP10□□□□□ -0.81
SHROOM3-208ENST00000486758 POLQO75417 2590 aa10□□□□□ -0.81
SHROOM3-208ENST00000486758 TRAV8-6A0A0B4J262 113 aa10□□□□□ -0.81
SHROOM3-208ENST00000486758 IGHV1-24A0A0C4DH33 117 aa10□□□□□ -0.81
SHROOM3-208ENST00000486758 FAM231BA6NCW3 169 aa10□□□□□ -0.81
SHROOM3-208ENST00000486758 OR2J3O76001 311 aa10□□□□□ -0.81
SHROOM3-208ENST00000486758 CD69Q07108 199 aa10□□□□□ -0.81
SHROOM3-208ENST00000486758 DIAPH2-AS1Q14236 149 aa10□□□□□ -0.81
SHROOM3-208ENST00000486758 BVES-AS1Q5T3Y7 98 aa10□□□□□ -0.81
SHROOM3-208ENST00000486758 EXOC3-AS1Q8N2X6 119 aa10□□□□□ -0.81
SHROOM3-208ENST00000486758 RBPJQ06330 500 aa9.99□□□□□ -0.81
SHROOM3-208ENST00000486758 SMAGPQ0VAQ4 97 aa9.99□□□□□ -0.81
SHROOM3-208ENST00000486758 PLA2G2CQ5R387 149 aa9.99□□□□□ -0.81
SHROOM3-208ENST00000486758 MTURNQ8N3F0 131 aa9.99□□□□□ -0.81
SHROOM3-208ENST00000486758 GPR82Q96P67 336 aa9.99□□□□□ -0.81
SHROOM3-208ENST00000486758 SPCS1Q9Y6A9 102 aa9.99□□□□□ -0.81
SHROOM3-208ENST00000486758 LRRK2Q5S007 2527 aa9.99□□□□□ -0.81
SHROOM3-208ENST00000486758 ARL3P36405 182 aa9.99□□□□□ -0.81
SHROOM3-208ENST00000486758 CACNG7P62955 275 aa9.99□□□□□ -0.81
SHROOM3-208ENST00000486758 GUSBP1Q15486 140 aa9.99□□□□□ -0.81
SHROOM3-208ENST00000486758 SFTA2Q6UW10 78 aa9.99□□□□□ -0.81
SHROOM3-208ENST00000486758 ST20Q9HBF5 79 aa9.99□□□□□ -0.81
SHROOM3-208ENST00000486758 USP24Q9UPU5 2620 aa9.99□□□□□ -0.81
SHROOM3-208ENST00000486758 MYO9AB2RTY4 2548 aa9.99□□□□□ -0.81
SHROOM3-208ENST00000486758 Q8N7P7 452 aa9.99□□□□□ -0.81
SHROOM3-208ENST00000486758 C11orf52Q96A22 123 aa9.99□□□□□ -0.81
SHROOM3-208ENST00000486758 MRPL27Q9P0M9 148 aaKnown RBP9.99□□□□□ -0.81
SHROOM3-208ENST00000486758 EPDR1Q9UM22 224 aa9.99□□□□□ -0.81
SHROOM3-208ENST00000486758 TET2Q6N021 2002 aaPredicted RBP9.99□□□□□ -0.81
SHROOM3-208ENST00000486758 UCNP55089 124 aa9.98□□□□□ -0.81
SHROOM3-208ENST00000486758 GDF5OSQ5U4N7 250 aa9.98□□□□□ -0.81
SHROOM3-208ENST00000486758 LYPD2Q6UXB3 125 aa9.98□□□□□ -0.81
SHROOM3-208ENST00000486758 C22orf34Q6ZV56 151 aa9.98□□□□□ -0.81
SHROOM3-208ENST00000486758 Q8N976 141 aa9.98□□□□□ -0.81
SHROOM3-208ENST00000486758 C5orf17Q8NAS9 161 aa9.98□□□□□ -0.81
SHROOM3-208ENST00000486758 GTSF1LQ9H1H1 148 aa9.98□□□□□ -0.81
SHROOM3-208ENST00000486758 AKAP13Q12802 2813 aa9.98□□□□□ -0.81
SHROOM3-208ENST00000486758 TMEM97Q5BJF2 176 aa9.98□□□□□ -0.81
SHROOM3-208ENST00000486758 CCDC168Q8NDH2 2452 aa9.98□□□□□ -0.81
SHROOM3-208ENST00000486758 USP9YO00507 2555 aaPredicted RBP9.98□□□□□ -0.81
SHROOM3-208ENST00000486758 SMIM27A0A1W2PRY6 76 aa9.98□□□□□ -0.81
SHROOM3-208ENST00000486758 SRRM4A7MD48 611 aaKnown RBP9.98□□□□□ -0.81
SHROOM3-208ENST00000486758 K7EQM0 130 aa9.98□□□□□ -0.81
SHROOM3-208ENST00000486758 UPK2O00526 184 aa9.98□□□□□ -0.81
SHROOM3-208ENST00000486758 C1orf162Q8NEQ5 155 aaPredicted RBP9.98□□□□□ -0.81
SHROOM3-208ENST00000486758 OR10AG1Q8NH19 301 aa9.98□□□□□ -0.81
SHROOM3-208ENST00000486758 SMIM12Q96EX1 92 aa9.98□□□□□ -0.81
SHROOM3-208ENST00000486758 PCSK5Q92824 1860 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 C15orf65H3BRN8 121 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 IGHG3P01860 377 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 TMPRSS3P57727 454 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 PRR20EP86478 221 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 PRR20CP86479 221 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 PRR20DP86480 221 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 PRR20BP86481 221 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 PRR20AP86496 221 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 PRCDQ00LT1 54 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 Q9H3A6 140 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 VPS13CQ709C8 3753 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 J3QKU1 62 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 TAX1BP3O14907 124 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 ESDP10768 282 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 DKK4Q9UBT3 224 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 LY96Q9Y6Y9 160 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 DSCAMO60469 2012 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 K7EMI3 77 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 P0C879 139 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 HIST1H1AQ02539 215 aaPredicted RBP9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 RIGQ13278 110 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 RBPMS2Q6ZRY4 209 aaKnown RBP9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 SPATA12Q7Z6I5 190 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 OR1N2Q8NGR9 330 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 OR2K2Q8NGT1 345 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 FBXL15Q9H469 300 aa9.97□□□□□ -0.81
SHROOM3-208ENST00000486758 A1L4Q6 167 aa9.96□□□□□ -0.81
SHROOM3-208ENST00000486758 FABP2P12104 132 aa9.96□□□□□ -0.81
SHROOM3-208ENST00000486758 HIF1ANQ9NWT6 349 aa9.96□□□□□ -0.81
SHROOM3-208ENST00000486758 IGHV3-23P01764 117 aa9.96□□□□□ -0.81
SHROOM3-208ENST00000486758 ZNF503Q96F45 646 aa9.96□□□□□ -0.81
SHROOM3-208ENST00000486758 MRPL32Q9BYC8 188 aaKnown RBP9.96□□□□□ -0.81
SHROOM3-208ENST00000486758 FAM215AQ9Y5M1 114 aa9.96□□□□□ -0.81
SHROOM3-208ENST00000486758 C17orf100A8MU93 164 aa9.96□□□□□ -0.82
SHROOM3-208ENST00000486758 ZNF207O43670 478 aaKnown RBP9.96□□□□□ -0.82
SHROOM3-208ENST00000486758 CD3EP07766 207 aa9.96□□□□□ -0.82
SHROOM3-208ENST00000486758 ZNF329Q86UD4 541 aa9.96□□□□□ -0.82
SHROOM3-208ENST00000486758 SLC25A2Q9BXI2 301 aa9.96□□□□□ -0.82
SHROOM3-208ENST00000486758 CHODLQ9H9P2 273 aa9.96□□□□□ -0.82
SHROOM3-208ENST00000486758 IGHV3OR16-13A0A075B7E8 117 aa9.95□□□□□ -0.82
SHROOM3-208ENST00000486758 IGHV3-74A0A0B4J1X5 117 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms