RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 C10orf95Q9H7T3 257 aa0.45□□□□□ -2.34
LTN1-206ENST00000486427 TNFSF18Q9UNG2 199 aa0.45□□□□□ -2.34
LTN1-206ENST00000486427 MIA2Q96PC5 1412 aa0.45□□□□□ -2.34
LTN1-206ENST00000486427 IGLV3-32A0A0A0MS00 114 aa0.44□□□□□ -2.34
LTN1-206ENST00000486427 HLA-EP13747 358 aa0.44□□□□□ -2.34
LTN1-206ENST00000486427 HSD11B1P28845 292 aa0.44□□□□□ -2.34
LTN1-206ENST00000486427 C1orf134Q5TEV5 83 aa0.44□□□□□ -2.34
LTN1-206ENST00000486427 LINC00575Q6W349 94 aa0.44□□□□□ -2.34
LTN1-206ENST00000486427 CCDC94Q9BW85 323 aaPredicted RBP0.44□□□□□ -2.34
LTN1-206ENST00000486427 C17orf112F2Z3M2 114 aa0.43□□□□□ -2.34
LTN1-206ENST00000486427 CST8O60676 142 aa0.43□□□□□ -2.34
LTN1-206ENST00000486427 CXCL8P10145 99 aa0.43□□□□□ -2.34
LTN1-206ENST00000486427 CAPZBP47756 277 aa0.43□□□□□ -2.34
LTN1-206ENST00000486427 SPATA8Q6RVD6 105 aa0.43□□□□□ -2.34
LTN1-206ENST00000486427 DGCR14Q96DF8 476 aaKnown RBP0.43□□□□□ -2.34
LTN1-206ENST00000486427 PRRT1Q99946 306 aa0.43□□□□□ -2.34
LTN1-206ENST00000486427 NPCDR1Q9BY65 106 aa0.43□□□□□ -2.34
LTN1-206ENST00000486427 PBOV1Q9GZY1 135 aa0.43□□□□□ -2.34
LTN1-206ENST00000486427 SIP14410 1827 aa0.43□□□□□ -2.34
LTN1-206ENST00000486427 NUP98P52948 1817 aa0.43□□□□□ -2.34
LTN1-206ENST00000486427 CEP164Q9UPV0 1460 aa0.42□□□□□ -2.34
LTN1-206ENST00000486427 OR2T8A6NH00 312 aa0.42□□□□□ -2.34
LTN1-206ENST00000486427 F8W1H4 67 aa0.42□□□□□ -2.34
LTN1-206ENST00000486427 IGLV3-1P01715 115 aa0.42□□□□□ -2.34
LTN1-206ENST00000486427 COX7CP15954 63 aa0.42□□□□□ -2.34
LTN1-206ENST00000486427 NCALDP61601 193 aa0.42□□□□□ -2.34
LTN1-206ENST00000486427 CDK6Q00534 326 aa0.42□□□□□ -2.34
LTN1-206ENST00000486427 EIF5AL1Q6IS14 154 aaKnown RBP0.42□□□□□ -2.34
LTN1-206ENST00000486427 S100A7AQ86SG5 101 aa0.42□□□□□ -2.34
LTN1-206ENST00000486427 EXOC3-AS1Q8N2X6 119 aa0.42□□□□□ -2.34
LTN1-206ENST00000486427 POP5Q969H6 163 aaKnown RBP0.42□□□□□ -2.34
LTN1-206ENST00000486427 RAB37Q96AX2 223 aa0.42□□□□□ -2.34
LTN1-206ENST00000486427 MUCL1Q96DR8 90 aa0.42□□□□□ -2.34
LTN1-206ENST00000486427 ZC2HC1AQ96GY0 325 aa0.42□□□□□ -2.34
LTN1-206ENST00000486427 GGACTQ9BVM4 153 aa0.42□□□□□ -2.34
LTN1-206ENST00000486427 HEATR1Q9H583 2144 aaKnown RBP0.42□□□□□ -2.34
LTN1-206ENST00000486427 TRPM1Q7Z4N2 1603 aa0.42□□□□□ -2.34
LTN1-206ENST00000486427 ZFC3H1O60293 1989 aaKnown RBP0.41□□□□□ -2.34
LTN1-206ENST00000486427 H3BRM9 83 aa0.41□□□□□ -2.34
LTN1-206ENST00000486427 CRHP06850 196 aa0.41□□□□□ -2.34
LTN1-206ENST00000486427 OR10J4P0C629 311 aa0.41□□□□□ -2.34
LTN1-206ENST00000486427 TEN1Q86WV5 123 aa0.41□□□□□ -2.34
LTN1-206ENST00000486427 OR5AS1Q8N127 324 aa0.41□□□□□ -2.34
LTN1-206ENST00000486427 OR5D16Q8NGK9 328 aa0.41□□□□□ -2.34
LTN1-206ENST00000486427 PSMF1Q92530 271 aa0.41□□□□□ -2.34
LTN1-206ENST00000486427 UBR2Q8IWV8 1755 aa0.41□□□□□ -2.34
LTN1-206ENST00000486427 MED12Q93074 2177 aa0.4□□□□□ -2.34
LTN1-206ENST00000486427 M0R233 179 aa0.4□□□□□ -2.35
LTN1-206ENST00000486427 NFYBP25208 207 aa0.4□□□□□ -2.35
LTN1-206ENST00000486427 DHRS4L2Q6PKH6 230 aa0.4□□□□□ -2.35
LTN1-206ENST00000486427 ZNF431Q8TF32 576 aaPredicted RBP0.4□□□□□ -2.35
LTN1-206ENST00000486427 PHB2Q99623 299 aa0.4□□□□□ -2.35
LTN1-206ENST00000486427 POPDC3Q9HBV1 291 aa0.4□□□□□ -2.35
LTN1-206ENST00000486427 TMEM138Q9NPI0 162 aa0.4□□□□□ -2.35
LTN1-206ENST00000486427 OR52A1Q9UKL2 312 aa0.4□□□□□ -2.35
LTN1-206ENST00000486427 PYCARDQ9ULZ3 195 aa0.4□□□□□ -2.35
LTN1-206ENST00000486427 ARL5AQ9Y689 179 aa0.4□□□□□ -2.35
LTN1-206ENST00000486427 MYO18AQ92614 2054 aaKnown RBP0.4□□□□□ -2.35
LTN1-206ENST00000486427 COL24A1Q17RW2 1714 aa0.39□□□□□ -2.35
LTN1-206ENST00000486427 MYLKQ15746 1914 aa0.39□□□□□ -2.35
LTN1-206ENST00000486427 CITO14578 2027 aa0.39□□□□□ -2.35
LTN1-206ENST00000486427 DUXBA0A1W2PPF3 345 aa0.39□□□□□ -2.35
LTN1-206ENST00000486427 K7EIL1 84 aa0.39□□□□□ -2.35
LTN1-206ENST00000486427 KMT2DO14686 5537 aa0.39□□□□□ -2.35
LTN1-206ENST00000486427 BANF1O75531 89 aa0.39□□□□□ -2.35
LTN1-206ENST00000486427 RAB5CP51148 216 aa0.39□□□□□ -2.35
LTN1-206ENST00000486427 INSL3P51460 131 aa0.39□□□□□ -2.35
LTN1-206ENST00000486427 ARPINQ7Z6K5 226 aa0.39□□□□□ -2.35
LTN1-206ENST00000486427 PXT1Q8NFP0 134 aa0.39□□□□□ -2.35
LTN1-206ENST00000486427 CHMP6Q96FZ7 201 aa0.39□□□□□ -2.35
LTN1-206ENST00000486427 MED29Q9NX70 200 aa0.39□□□□□ -2.35
LTN1-206ENST00000486427 PRNDQ9UKY0 176 aa0.39□□□□□ -2.35
LTN1-206ENST00000486427 UNC13CQ8NB66 2214 aa0.39□□□□□ -2.35
LTN1-206ENST00000486427 NCAPD3P42695 1498 aa0.39□□□□□ -2.35
LTN1-206ENST00000486427 NUP210LQ5VU65 1888 aa0.39□□□□□ -2.35
LTN1-206ENST00000486427 MYO5AQ9Y4I1 1855 aaKnown RBP0.39□□□□□ -2.35
LTN1-206ENST00000486427 DOCK4Q8N1I0 1966 aa0.39□□□□□ -2.35
LTN1-206ENST00000486427 NISCHQ9Y2I1 1504 aa0.38□□□□□ -2.35
LTN1-206ENST00000486427 ASCC3Q8N3C0 2202 aaKnown RBP0.38□□□□□ -2.35
LTN1-206ENST00000486427 TRAV27A0A087WT01 109 aa0.38□□□□□ -2.35
LTN1-206ENST00000486427 NDUFC2O95298 119 aa0.38□□□□□ -2.35
LTN1-206ENST00000486427 TMED2Q15363 201 aa0.38□□□□□ -2.35
LTN1-206ENST00000486427 GLIPR1L1Q6UWM5 242 aa0.38□□□□□ -2.35
LTN1-206ENST00000486427 TMEM14EPQ6UXP3 125 aa0.38□□□□□ -2.35
LTN1-206ENST00000486427 OR10AG1Q8NH19 301 aa0.38□□□□□ -2.35
LTN1-206ENST00000486427 PPTC7Q8NI37 304 aa0.38□□□□□ -2.35
LTN1-206ENST00000486427 CHCHD1Q96BP2 118 aaKnown RBP0.38□□□□□ -2.35
LTN1-206ENST00000486427 HYLS1Q96M11 299 aa0.38□□□□□ -2.35
LTN1-206ENST00000486427 FRMPD1Q5SYB0 1578 aa0.37□□□□□ -2.35
LTN1-206ENST00000486427 TET1Q8NFU7 2136 aa0.37□□□□□ -2.35
LTN1-206ENST00000486427 A0A0D9SG42 100 aa0.37□□□□□ -2.35
LTN1-206ENST00000486427 JMJD7-PLA2G4BH0Y9G9 81 aa0.37□□□□□ -2.35
LTN1-206ENST00000486427 AIPO00170 330 aa0.37□□□□□ -2.35
LTN1-206ENST00000486427 ATP5HO75947 161 aa0.37□□□□□ -2.35
LTN1-206ENST00000486427 PPYP01298 95 aa0.37□□□□□ -2.35
LTN1-206ENST00000486427 PRH1P02810 166 aa0.37□□□□□ -2.35
LTN1-206ENST00000486427 GNG5P63218 68 aa0.37□□□□□ -2.35
LTN1-206ENST00000486427 MRPS25P82663 173 aaKnown RBP0.37□□□□□ -2.35
LTN1-206ENST00000486427 OR2J1Q9GZK6 312 aa0.37□□□□□ -2.35
LTN1-206ENST00000486427 ASB4Q9Y574 426 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms